EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSSCG00000034066 (Gene tree)
Gene ID
100624066
Gene Symbol
-
Alias
MADP-1|MADP1|RBM36|SNRNP31|ZCCHC19
Full Name
zinc finger CCHC-type and RNA binding motif containing 1
Gene Type
protein_coding
Species
Sus_scrofa
Status
putative
Strand
Minus strand
Length
21808 bases
Position
chr5:73534697-73556504
Accession
100624066
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSSCP00000049793zf-CCHCPF00098.235.9e-0511
ENSSSCP00000049793RRM_5PF13893.64.6e-0811
ENSSSCP00000049793RRM_1PF00076.222.7e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSSCT00000044401-5901XM_021092556ENSSSCP00000049793217 (aa)XP_020948215A0A287B113
Gene Model
Click here to download ENSSSCG00000034066's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000034066's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSSCG00000034066-10070.507ENSSSCG00000033618-10070.507
ENSSSCG00000034066-5232.759ENSSSCG00000008484SRSF78132.759
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSSCG00000034066-10098.157ENSG00000139168ZCRB110098.496Homo_sapiens
ENSSSCG00000034066-10079.464ENSAPOG00000012709zcrb110076.786Acanthochromis_polyacanthus
ENSSSCG00000034066-10098.618ENSAMEG00000013837ZCRB110098.618Ailuropoda_melanoleuca
ENSSSCG00000034066-10080.455ENSACIG00000015990zcrb110080.455Amphilophus_citrinellus
ENSSSCG00000034066-10076.786ENSAOCG00000015798zcrb110075.893Amphiprion_ocellaris
ENSSSCG00000034066-10076.786ENSAPEG00000017955zcrb110075.893Amphiprion_percula
ENSSSCG00000034066-10070.776ENSATEG00000012544zcrb110070.776Anabas_testudineus
ENSSSCG00000034066-10086.036ENSAPLG00000004312ZCRB110085.135Anas_platyrhynchos
ENSSSCG00000034066-10091.244ENSACAG00000003172ZCRB110091.244Anolis_carolinensis
ENSSSCG00000034066-10098.618ENSANAG00000020058ZCRB110098.618Aotus_nancymaae
ENSSSCG00000034066-10077.376ENSACLG00000001060zcrb110077.828Astatotilapia_calliptera
ENSSSCG00000034066-10074.091ENSAMXG00000033790zcrb110073.636Astyanax_mexicanus
ENSSSCG00000034066-10097.235ENSBTAG00000018340-10097.235Bos_taurus
ENSSSCG00000034066-10098.618ENSBTAG00000019119ZCRB110098.618Bos_taurus
ENSSSCG00000034066-10098.618ENSCJAG00000017749ZCRB110099.329Callithrix_jacchus
ENSSSCG00000034066-10098.618ENSCAFG00000030751ZCRB110098.618Canis_familiaris
ENSSSCG00000034066-10098.618ENSCAFG00020010455ZCRB110098.618Canis_lupus_dingo
ENSSSCG00000034066-10098.618ENSCHIG00000010312-10098.618Capra_hircus
ENSSSCG00000034066-10090.783ENSCHIG00000012567-10090.783Capra_hircus
ENSSSCG00000034066-10098.618ENSTSYG00000010691-10098.618Carlito_syrichta
ENSSSCG00000034066-10074.654ENSTSYG00000026505-10073.733Carlito_syrichta
ENSSSCG00000034066-8192.697ENSTSYG00000025575-10092.697Carlito_syrichta
ENSSSCG00000034066-6573.944ENSCAPG00000011576-10067.606Cavia_aperea
ENSSSCG00000034066-10090.323ENSCPOG00000031127ZCRB110089.862Cavia_porcellus
ENSSSCG00000034066-6697.917ENSCCAG00000035450-8997.917Cebus_capucinus
ENSSSCG00000034066-6283.453ENSCCAG00000021693-7984.091Cebus_capucinus
ENSSSCG00000034066-8098.851ENSCCAG00000032546-8898.851Cebus_capucinus
ENSSSCG00000034066-10097.235ENSCATG00000028610ZCRB110097.235Cercocebus_atys
ENSSSCG00000034066-10090.323ENSCLAG00000002653ZCRB110088.018Chinchilla_lanigera
ENSSSCG00000034066-10098.618ENSCSAG00000007086ZCRB110098.618Chlorocebus_sabaeus
ENSSSCG00000034066-10079.724ENSCHOG00000004490ZCRB110079.724Choloepus_hoffmanni
ENSSSCG00000034066-9791.469ENSCPBG00000015507ZCRB19891.469Chrysemys_picta_bellii
ENSSSCG00000034066-9952.232ENSCING00000017297-9951.339Ciona_intestinalis
ENSSSCG00000034066-8448.148ENSCSAVG00000010693-9948.148Ciona_savignyi
ENSSSCG00000034066-10098.618ENSCANG00000042161ZCRB110098.618Colobus_angolensis_palliatus
ENSSSCG00000034066-10091.244ENSCGRG00001023392Zcrb110090.783Cricetulus_griseus_chok1gshd
ENSSSCG00000034066-10091.244ENSCGRG00000004778Zcrb110090.783Cricetulus_griseus_crigri
ENSSSCG00000034066-10077.727ENSCSEG00000010498zcrb110075.909Cynoglossus_semilaevis
ENSSSCG00000034066-10076.471ENSCVAG00000001057zcrb110076.471Cyprinodon_variegatus
ENSSSCG00000034066-10075.909ENSDARG00000045691zcrb110071.818Danio_rerio
ENSSSCG00000034066-10094.470ENSDNOG00000048722-10094.470Dasypus_novemcinctus
ENSSSCG00000034066-6580.851ENSDNOG00000038480-9580.851Dasypus_novemcinctus
ENSSSCG00000034066-5993.798ENSDNOG00000049476-8193.798Dasypus_novemcinctus
ENSSSCG00000034066-10060.829ENSDORG00000026623-10065.438Dipodomys_ordii
ENSSSCG00000034066-8196.023ENSDORG00000025789-10096.023Dipodomys_ordii
ENSSSCG00000034066-10088.479ENSETEG00000019302ZCRB110088.479Echinops_telfairi
ENSSSCG00000034066-9971.560ENSEBUG00000010289zcrb19971.560Eptatretus_burgeri
ENSSSCG00000034066-10097.696ENSEASG00005023491ZCRB19397.696Equus_asinus_asinus
ENSSSCG00000034066-10097.696ENSECAG00000012174ZCRB110097.696Equus_caballus
ENSSSCG00000034066-10090.323ENSEEUG00000000397ZCRB110090.323Erinaceus_europaeus
ENSSSCG00000034066-10078.924ENSELUG00000020877zcrb110075.785Esox_lucius
ENSSSCG00000034066-5083.486ENSFCAG00000035062-7083.486Felis_catus
ENSSSCG00000034066-10099.078ENSFCAG00000014760-10099.078Felis_catus
ENSSSCG00000034066-10088.940ENSFALG00000010262ZCRB110086.636Ficedula_albicollis
ENSSSCG00000034066-10093.088ENSFDAG00000013019-10090.783Fukomys_damarensis
ENSSSCG00000034066-10066.972ENSFDAG00000003663-10066.055Fukomys_damarensis
ENSSSCG00000034066-10073.394ENSFDAG00000004074-10072.477Fukomys_damarensis
ENSSSCG00000034066-10078.281ENSFHEG00000007426zcrb110075.566Fundulus_heteroclitus
ENSSSCG00000034066-10073.009ENSGMOG00000018788zcrb110073.009Gadus_morhua
ENSSSCG00000034066-10088.018ENSGALG00000009544ZCRB110085.714Gallus_gallus
ENSSSCG00000034066-10072.398ENSGAFG00000017414zcrb110074.661Gambusia_affinis
ENSSSCG00000034066-10075.336ENSGACG00000018860zcrb110073.991Gasterosteus_aculeatus
ENSSSCG00000034066-10092.166ENSGAGG00000008782ZCRB110092.166Gopherus_agassizii
ENSSSCG00000034066-10098.157ENSGGOG00000015647ZCRB110098.157Gorilla_gorilla
ENSSSCG00000034066-10072.477ENSGGOG00000043362-10074.576Gorilla_gorilla
ENSSSCG00000034066-10076.923ENSHBUG00000006367zcrb110077.376Haplochromis_burtoni
ENSSSCG00000034066-10077.419ENSHGLG00000006122-10075.576Heterocephalus_glaber_female
ENSSSCG00000034066-10082.488ENSHGLG00000006280-10082.028Heterocephalus_glaber_female
ENSSSCG00000034066-10072.350ENSHGLG00000008186-10071.889Heterocephalus_glaber_female
ENSSSCG00000034066-10082.949ENSHGLG00000007867-10082.488Heterocephalus_glaber_female
ENSSSCG00000034066-10091.244ENSHGLG00000001325-10090.783Heterocephalus_glaber_female
ENSSSCG00000034066-9764.953ENSHGLG00100017475-10064.953Heterocephalus_glaber_male
ENSSSCG00000034066-10076.498ENSHGLG00100009473-10074.654Heterocephalus_glaber_male
ENSSSCG00000034066-10088.940ENSHGLG00100019510-10085.253Heterocephalus_glaber_male
ENSSSCG00000034066-8182.386ENSHGLG00100015818-10080.114Heterocephalus_glaber_male
ENSSSCG00000034066-10082.488ENSHGLG00100012202-10082.028Heterocephalus_glaber_male
ENSSSCG00000034066-8178.409ENSHGLG00100012132-10076.705Heterocephalus_glaber_male
ENSSSCG00000034066-10076.233ENSHCOG00000009098zcrb110072.646Hippocampus_comes
ENSSSCG00000034066-5981.250ENSIPUG00000017007zcrb19081.250Ictalurus_punctatus
ENSSSCG00000034066-8099.425ENSSTOG00000034477-10099.425Ictidomys_tridecemlineatus
ENSSSCG00000034066-10098.157ENSSTOG00000023833-10098.157Ictidomys_tridecemlineatus
ENSSSCG00000034066-8186.441ENSJJAG00000012365-9886.441Jaculus_jaculus
ENSSSCG00000034066-8171.591ENSJJAG00000020804-10073.864Jaculus_jaculus
ENSSSCG00000034066-10095.853ENSJJAG00000021636-10095.853Jaculus_jaculus
ENSSSCG00000034066-10078.802ENSJJAG00000023083-10078.341Jaculus_jaculus
ENSSSCG00000034066-10076.923ENSKMAG00000012448zcrb110075.113Kryptolebias_marmoratus
ENSSSCG00000034066-10075.000ENSLBEG00000004257zcrb110076.339Labrus_bergylta
ENSSSCG00000034066-10063.303ENSLACG00000007970ZCRB110063.303Latimeria_chalumnae
ENSSSCG00000034066-10080.000ENSLOCG00000001409zcrb110079.545Lepisosteus_oculatus
ENSSSCG00000034066-10096.313ENSLAFG00000008847ZCRB110096.313Loxodonta_africana
ENSSSCG00000034066-5975.194ENSMFAG00000030462-7775.194Macaca_fascicularis
ENSSSCG00000034066-10097.696ENSMFAG00000005490-10097.696Macaca_fascicularis
ENSSSCG00000034066-8798.413ENSMFAG00000039789ZCRB110098.413Macaca_fascicularis
ENSSSCG00000034066-9969.767ENSMMUG00000041598-9964.651Macaca_mulatta
ENSSSCG00000034066-8198.295ENSMMUG00000017319ZCRB110098.295Macaca_mulatta
ENSSSCG00000034066-9972.558ENSMNEG00000032137-9969.302Macaca_nemestrina
ENSSSCG00000034066-65100.000ENSMNEG00000041890-96100.000Macaca_nemestrina
ENSSSCG00000034066-10096.774ENSMNEG00000001077-10096.774Macaca_nemestrina
ENSSSCG00000034066-10098.618ENSMLEG00000042951ZCRB110098.618Mandrillus_leucophaeus
ENSSSCG00000034066-9971.628ENSMLEG00000034590-9968.372Mandrillus_leucophaeus
ENSSSCG00000034066-10078.378ENSMAMG00000009034zcrb110075.225Mastacembelus_armatus
ENSSSCG00000034066-10077.376ENSMZEG00005010889zcrb110077.828Maylandia_zebra
ENSSSCG00000034066-10088.479ENSMGAG00000009450ZCRB110088.479Meleagris_gallopavo
ENSSSCG00000034066-10090.783ENSMAUG00000009266Zcrb110090.323Mesocricetus_auratus
ENSSSCG00000034066-10083.410ENSMICG00000026774-10083.410Microcebus_murinus
ENSSSCG00000034066-10097.696ENSMICG00000017422-10097.696Microcebus_murinus
ENSSSCG00000034066-10094.470ENSMOCG00000011009Zcrb110094.470Microtus_ochrogaster
ENSSSCG00000034066-10070.183ENSMMOG00000002395zcrb110069.725Mola_mola
ENSSSCG00000034066-9282.915ENSMODG00000008893-9482.915Monodelphis_domestica
ENSSSCG00000034066-10089.401ENSMODG00000006493-10089.401Monodelphis_domestica
ENSSSCG00000034066-10079.091ENSMALG00000016907zcrb18574.545Monopterus_albus
ENSSSCG00000034066-10094.931MGP_CAROLIEiJ_G0020191Zcrb110094.931Mus_caroli
ENSSSCG00000034066-10094.931ENSMUSG00000022635Zcrb110094.931Mus_musculus
ENSSSCG00000034066-10095.392MGP_PahariEiJ_G0020195Zcrb110095.392Mus_pahari
ENSSSCG00000034066-10094.931MGP_SPRETEiJ_G0021087Zcrb110094.931Mus_spretus
ENSSSCG00000034066-10070.354ENSMPUG00000005129-10069.604Mustela_putorius_furo
ENSSSCG00000034066-10088.636ENSMPUG00000000901-10091.818Mustela_putorius_furo
ENSSSCG00000034066-10099.078ENSMPUG00000000327-10099.078Mustela_putorius_furo
ENSSSCG00000034066-10095.392ENSMLUG00000026012-10095.392Myotis_lucifugus
ENSSSCG00000034066-10095.853ENSMLUG00000029416-10095.853Myotis_lucifugus
ENSSSCG00000034066-10098.618ENSMLUG00000001332-10098.618Myotis_lucifugus
ENSSSCG00000034066-10095.392ENSNGAG00000020193Zcrb110095.392Nannospalax_galili
ENSSSCG00000034066-10080.000ENSNBRG00000001430zcrb110077.727Neolamprologus_brichardi
ENSSSCG00000034066-10098.618ENSNLEG00000017944ZCRB110098.618Nomascus_leucogenys
ENSSSCG00000034066-8291.061ENSMEUG00000003563ZCRB110091.061Notamacropus_eugenii
ENSSSCG00000034066-8793.651ENSOPRG00000011095ZCRB110093.651Ochotona_princeps
ENSSSCG00000034066-10085.714ENSODEG00000019971-10083.410Octodon_degus
ENSSSCG00000034066-9987.907ENSODEG00000018576-9385.581Octodon_degus
ENSSSCG00000034066-10087.097ENSODEG00000003051-10085.253Octodon_degus
ENSSSCG00000034066-8167.045ENSODEG00000000147-10064.205Octodon_degus
ENSSSCG00000034066-10081.567ENSODEG00000007573-10077.419Octodon_degus
ENSSSCG00000034066-10080.180ENSONIG00000016844zcrb110077.477Oreochromis_niloticus
ENSSSCG00000034066-10092.627ENSOANG00000009891ZCRB110092.627Ornithorhynchus_anatinus
ENSSSCG00000034066-8382.320ENSOCUG00000013664-10088.950Oryctolagus_cuniculus
ENSSSCG00000034066-10084.793ENSOCUG00000026539-10084.332Oryctolagus_cuniculus
ENSSSCG00000034066-9979.358ENSORLG00000013088zcrb19877.064Oryzias_latipes
ENSSSCG00000034066-9979.817ENSORLG00020019676zcrb19877.523Oryzias_latipes_hni
ENSSSCG00000034066-9979.817ENSORLG00015017998zcrb18377.523Oryzias_latipes_hsok
ENSSSCG00000034066-10078.733ENSOMEG00000011896zcrb110076.471Oryzias_melastigma
ENSSSCG00000034066-10079.724ENSOGAG00000031462-10080.184Otolemur_garnettii
ENSSSCG00000034066-10093.088ENSOGAG00000026881-10093.088Otolemur_garnettii
ENSSSCG00000034066-10097.696ENSOGAG00000013178-10097.696Otolemur_garnettii
ENSSSCG00000034066-10098.618ENSOARG00000004530-10098.618Ovis_aries
ENSSSCG00000034066-10098.618ENSOARG00000019797-10098.618Ovis_aries
ENSSSCG00000034066-10098.157ENSOARG00000000782-10098.157Ovis_aries
ENSSSCG00000034066-10098.157ENSPPAG00000030593ZCRB110098.157Pan_paniscus
ENSSSCG00000034066-10072.936ENSPPAG00000041848-10071.560Pan_paniscus
ENSSSCG00000034066-10099.078ENSPPRG00000003066-10099.078Panthera_pardus
ENSSSCG00000034066-10099.078ENSPTIG00000018037ZCRB110099.078Panthera_tigris_altaica
ENSSSCG00000034066-10098.157ENSPTRG00000004838ZCRB110098.157Pan_troglodytes
ENSSSCG00000034066-10071.101ENSPTRG00000045111-10069.725Pan_troglodytes
ENSSSCG00000034066-10098.618ENSPANG00000010274ZCRB110098.618Papio_anubis
ENSSSCG00000034066-9973.023ENSPANG00000031708-9970.233Papio_anubis
ENSSSCG00000034066-10079.091ENSPKIG00000006587zcrb110075.909Paramormyrops_kingsleyae
ENSSSCG00000034066-10092.166ENSPSIG00000014606ZCRB110092.166Pelodiscus_sinensis
ENSSSCG00000034066-10078.475ENSPMGG00000007605zcrb110073.991Periophthalmus_magnuspinnatus
ENSSSCG00000034066-10094.931ENSPEMG00000005293Zcrb110094.931Peromyscus_maniculatus_bairdii
ENSSSCG00000034066-8866.667ENSPMAG00000001258zcrb110067.179Petromyzon_marinus
ENSSSCG00000034066-10092.166ENSPCIG00000029300-10092.166Phascolarctos_cinereus
ENSSSCG00000034066-10075.566ENSPFOG00000015564zcrb110076.018Poecilia_formosa
ENSSSCG00000034066-10072.851ENSPLAG00000004685zcrb110075.566Poecilia_latipinna
ENSSSCG00000034066-10075.566ENSPMEG00000005524zcrb110076.018Poecilia_mexicana
ENSSSCG00000034066-10070.588ENSPREG00000011402zcrb110069.683Poecilia_reticulata
ENSSSCG00000034066-10098.157ENSPPYG00000004422ZCRB110098.157Pongo_abelii
ENSSSCG00000034066-10094.470ENSPCAG00000011749ZCRB110094.470Procavia_capensis
ENSSSCG00000034066-10097.696ENSPCOG00000022958ZCRB110097.696Propithecus_coquereli
ENSSSCG00000034066-8593.478ENSPVAG00000006651ZCRB110093.478Pteropus_vampyrus
ENSSSCG00000034066-10079.545ENSPNYG00000008344zcrb110077.273Pundamilia_nyererei
ENSSSCG00000034066-10075.455ENSPNAG00000023955zcrb110072.727Pygocentrus_nattereri
ENSSSCG00000034066-10095.853ENSRNOG00000004996Zcrb110095.853Rattus_norvegicus
ENSSSCG00000034066-10098.157ENSRBIG00000042559ZCRB110098.157Rhinopithecus_bieti
ENSSSCG00000034066-10098.618ENSRROG00000033546ZCRB110098.618Rhinopithecus_roxellana
ENSSSCG00000034066-5984.375ENSSBOG00000022234-7884.677Saimiri_boliviensis_boliviensis
ENSSSCG00000034066-10097.696ENSSBOG00000019523ZCRB110097.696Saimiri_boliviensis_boliviensis
ENSSSCG00000034066-10092.166ENSSHAG00000006273ZCRB110092.166Sarcophilus_harrisii
ENSSSCG00000034066-10077.273ENSSFOG00015005150zcrb110075.455Scleropages_formosus
ENSSSCG00000034066-10074.324ENSSMAG00000020477zcrb110073.874Scophthalmus_maximus
ENSSSCG00000034066-10077.232ENSSDUG00000007140zcrb110077.232Seriola_dumerili
ENSSSCG00000034066-10077.880ENSSLDG00000012143zcrb110077.880Seriola_lalandi_dorsalis
ENSSSCG00000034066-8788.889ENSSARG00000000492ZCRB110088.889Sorex_araneus
ENSSSCG00000034066-8188.636ENSSPUG00000009960ZCRB110088.636Sphenodon_punctatus
ENSSSCG00000034066-10079.911ENSSPAG00000013412zcrb110079.911Stegastes_partitus
ENSSSCG00000034066-10089.862ENSTGUG00000005829ZCRB110087.558Taeniopygia_guttata
ENSSSCG00000034066-10078.802ENSTRUG00000016764zcrb110078.802Takifugu_rubripes
ENSSSCG00000034066-10071.364ENSTNIG00000018504zcrb110070.909Tetraodon_nigroviridis
ENSSSCG00000034066-10081.567ENSTBEG00000008097ZCRB110081.567Tupaia_belangeri
ENSSSCG00000034066-10099.078ENSTTRG00000001378ZCRB110099.078Tursiops_truncatus
ENSSSCG00000034066-10098.618ENSUMAG00000024199ZCRB110098.618Ursus_maritimus
ENSSSCG00000034066-10097.696ENSVPAG00000012040ZCRB110097.696Vicugna_pacos
ENSSSCG00000034066-10098.618ENSVVUG00000016801ZCRB110098.618Vulpes_vulpes
ENSSSCG00000034066-10080.365ENSXETG00000006796zcrb110077.626Xenopus_tropicalis
ENSSSCG00000034066-6880.272ENSXCOG00000014895zcrb18681.250Xiphophorus_couchianus
ENSSSCG00000034066-10074.429ENSXMAG00000009359zcrb110075.342Xiphophorus_maculatus

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