EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000034075 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 291 bases
Position: chr2:105490948-105491238
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000037263	Ribosomal_60s	PF00428.19	3.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000037639	-	276	-	ENSSSCP00000037263	91 (aa)	-	A0A286ZZY4

Gene Model

Click here to download ENSSSCG00000034075's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000034075's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000034075	-	60	65.000	ENSSSCG00000030774	-	70	65.000
ENSSSCG00000034075	-	97	62.366	ENSSSCG00000036629	-	75	68.817
ENSSSCG00000034075	-	88	65.000	ENSSSCG00000037729	-	73	65.000
ENSSSCG00000034075	-	87	70.886	ENSSSCG00000004261	-	72	72.619
ENSSSCG00000034075	-	81	50.000	ENSSSCG00000039680	-	88	54.054
ENSSSCG00000034075	-	87	50.602	ENSSSCG00000038563	-	75	57.143
ENSSSCG00000034075	-	89	46.512	ENSSSCG00000014178	-	67	61.628
ENSSSCG00000034075	-	100	55.208	ENSSSCG00000009677	-	77	72.917

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000034075	-	87	71.429	ENSAMEG00000014251	-	74	79.762	Ailuropoda_melanoleuca
ENSSSCG00000034075	-	88	51.250	ENSAMEG00000019321	-	72	51.250	Ailuropoda_melanoleuca
ENSSSCG00000034075	-	87	70.238	ENSANAG00000026305	-	74	78.571	Aotus_nancymaae
ENSSSCG00000034075	-	88	58.750	ENSANAG00000022129	-	72	62.500	Aotus_nancymaae
ENSSSCG00000034075	-	87	70.238	ENSCJAG00000047656	-	74	72.619	Callithrix_jacchus
ENSSSCG00000034075	-	88	71.765	ENSCAFG00000016581	-	75	71.765	Canis_familiaris
ENSSSCG00000034075	-	88	71.765	ENSCAFG00020018012	-	75	71.765	Canis_lupus_dingo
ENSSSCG00000034075	-	86	53.012	ENSCHIG00000022832	-	69	53.012	Capra_hircus
ENSSSCG00000034075	-	85	58.537	ENSCHIG00000024143	-	70	65.854	Capra_hircus
ENSSSCG00000034075	-	87	67.857	ENSCHIG00000008397	-	74	76.190	Capra_hircus
ENSSSCG00000034075	-	84	53.947	ENSCAPG00000013500	-	73	53.947	Cavia_aperea
ENSSSCG00000034075	-	87	63.095	ENSCCAG00000024387	-	74	69.048	Cebus_capucinus
ENSSSCG00000034075	-	85	58.537	ENSCATG00000038714	-	84	63.415	Cercocebus_atys
ENSSSCG00000034075	-	87	60.241	ENSCATG00000017079	-	73	70.238	Cercocebus_atys
ENSSSCG00000034075	-	87	58.228	ENSCATG00000002341	-	75	58.228	Cercocebus_atys
ENSSSCG00000034075	-	87	54.762	ENSCLAG00000007415	-	70	54.762	Chinchilla_lanigera
ENSSSCG00000034075	-	87	70.588	ENSCHOG00000011519	-	75	76.471	Choloepus_hoffmanni
ENSSSCG00000034075	-	87	70.238	ENSCHOG00000005944	-	74	78.571	Choloepus_hoffmanni
ENSSSCG00000034075	-	85	62.195	ENSCHOG00000012434	-	75	68.235	Choloepus_hoffmanni
ENSSSCG00000034075	-	87	64.286	ENSCANG00000018606	-	73	72.619	Colobus_angolensis_palliatus
ENSSSCG00000034075	-	87	69.048	ENSCGRG00001009737	-	74	77.381	Cricetulus_griseus_chok1gshd
ENSSSCG00000034075	-	87	70.886	ENSCGRG00001003498	-	72	70.886	Cricetulus_griseus_chok1gshd
ENSSSCG00000034075	-	87	70.886	ENSCGRG00000018894	-	72	70.886	Cricetulus_griseus_crigri
ENSSSCG00000034075	-	87	70.886	ENSCGRG00000019716	-	71	74.684	Cricetulus_griseus_crigri
ENSSSCG00000034075	-	86	56.667	ENSDNOG00000025296	-	74	56.667	Dasypus_novemcinctus
ENSSSCG00000034075	-	87	64.557	ENSETEG00000015041	-	72	64.557	Echinops_telfairi
ENSSSCG00000034075	-	87	63.095	ENSEASG00005010988	-	72	74.118	Equus_asinus_asinus
ENSSSCG00000034075	-	87	63.095	ENSEASG00005016776	-	72	74.118	Equus_asinus_asinus
ENSSSCG00000034075	-	87	61.905	ENSECAG00000023624	-	72	72.941	Equus_caballus
ENSSSCG00000034075	-	87	47.561	ENSELUG00000022681	rplp1	73	57.317	Esox_lucius
ENSSSCG00000034075	-	87	70.238	ENSFCAG00000041947	-	74	78.571	Felis_catus
ENSSSCG00000034075	-	97	56.180	ENSFCAG00000029626	-	73	62.921	Felis_catus
ENSSSCG00000034075	-	87	71.429	ENSFCAG00000029490	-	100	71.765	Felis_catus
ENSSSCG00000034075	-	87	62.353	ENSFALG00000002846	RPLP1	74	64.706	Ficedula_albicollis
ENSSSCG00000034075	-	87	49.398	ENSGACG00000003995	rplp1	74	60.465	Gasterosteus_aculeatus
ENSSSCG00000034075	-	87	65.823	ENSGGOG00000003741	-	72	65.823	Gorilla_gorilla
ENSSSCG00000034075	-	87	55.696	ENSGGOG00000040634	-	71	55.696	Gorilla_gorilla
ENSSSCG00000034075	-	87	46.429	ENSHGLG00000018147	-	69	52.381	Heterocephalus_glaber_female
ENSSSCG00000034075	-	87	63.095	ENSHGLG00000019837	-	73	71.084	Heterocephalus_glaber_female
ENSSSCG00000034075	-	86	75.904	ENSHGLG00000020825	-	73	75.904	Heterocephalus_glaber_female
ENSSSCG00000034075	-	87	65.476	ENSHGLG00000021267	-	74	71.429	Heterocephalus_glaber_female
ENSSSCG00000034075	-	87	46.429	ENSHGLG00100006420	-	69	52.381	Heterocephalus_glaber_male
ENSSSCG00000034075	-	87	63.095	ENSHGLG00100019872	-	73	71.084	Heterocephalus_glaber_male
ENSSSCG00000034075	-	86	75.904	ENSHGLG00100021197	-	73	75.904	Heterocephalus_glaber_male
ENSSSCG00000034075	-	87	71.429	ENSJJAG00000018966	-	74	73.810	Jaculus_jaculus
ENSSSCG00000034075	-	87	63.095	ENSJJAG00000012769	-	74	65.476	Jaculus_jaculus
ENSSSCG00000034075	-	86	70.513	ENSJJAG00000009505	-	74	70.513	Jaculus_jaculus
ENSSSCG00000034075	-	87	60.674	ENSLACG00000014113	rplp1	73	68.675	Latimeria_chalumnae
ENSSSCG00000034075	-	87	60.674	ENSLACG00000012630	-	73	68.675	Latimeria_chalumnae
ENSSSCG00000034075	-	87	58.537	ENSLOCG00000007729	rplp1	73	63.529	Lepisosteus_oculatus
ENSSSCG00000034075	-	87	51.807	ENSLAFG00000027631	-	74	51.807	Loxodonta_africana
ENSSSCG00000034075	-	86	69.880	ENSLAFG00000030284	-	92	71.429	Loxodonta_africana
ENSSSCG00000034075	-	87	73.810	ENSMFAG00000030096	-	74	76.190	Macaca_fascicularis
ENSSSCG00000034075	-	87	73.810	ENSMMUG00000031385	-	74	76.190	Macaca_mulatta
ENSSSCG00000034075	-	87	65.476	ENSMLEG00000010309	-	74	73.810	Mandrillus_leucophaeus
ENSSSCG00000034075	-	86	71.084	ENSMAUG00000001413	-	73	73.494	Mesocricetus_auratus
ENSSSCG00000034075	-	87	73.810	ENSMICG00000042593	-	74	76.190	Microcebus_murinus
ENSSSCG00000034075	-	87	63.095	ENSMOCG00000022518	-	70	71.429	Microtus_ochrogaster
ENSSSCG00000034075	-	87	64.286	MGP_SPRETEiJ_G0026816	Gm10073	74	71.429	Mus_spretus
ENSSSCG00000034075	-	87	58.333	ENSMPUG00000019642	-	73	58.333	Mustela_putorius_furo
ENSSSCG00000034075	-	87	64.286	ENSMPUG00000017096	-	74	73.810	Mustela_putorius_furo
ENSSSCG00000034075	-	86	57.317	ENSMLUG00000009394	-	74	66.265	Myotis_lucifugus
ENSSSCG00000034075	-	87	55.696	ENSMLUG00000000872	-	73	55.696	Myotis_lucifugus
ENSSSCG00000034075	-	87	65.476	ENSMLUG00000001373	-	74	67.857	Myotis_lucifugus
ENSSSCG00000034075	-	87	63.095	ENSMLUG00000028202	-	72	63.095	Myotis_lucifugus
ENSSSCG00000034075	-	51	68.085	ENSMLUG00000030579	-	91	61.905	Myotis_lucifugus
ENSSSCG00000034075	-	84	57.895	ENSNGAG00000012870	-	59	60.494	Nannospalax_galili
ENSSSCG00000034075	-	84	48.684	ENSNGAG00000016928	-	55	56.579	Nannospalax_galili
ENSSSCG00000034075	-	87	54.430	ENSNLEG00000030239	-	67	54.430	Nomascus_leucogenys
ENSSSCG00000034075	-	86	65.476	ENSMEUG00000013304	-	74	65.476	Notamacropus_eugenii
ENSSSCG00000034075	-	59	55.000	ENSMEUG00000005705	-	73	56.164	Notamacropus_eugenii
ENSSSCG00000034075	-	85	53.012	ENSMEUG00000009856	-	99	63.095	Notamacropus_eugenii
ENSSSCG00000034075	-	87	71.429	ENSODEG00000019050	-	74	73.810	Octodon_degus
ENSSSCG00000034075	-	87	70.238	ENSOARG00000004251	-	74	72.619	Ovis_aries
ENSSSCG00000034075	-	87	65.823	ENSPPAG00000005636	-	72	65.823	Pan_paniscus
ENSSSCG00000034075	-	87	67.857	ENSPPRG00000002138	-	75	67.857	Panthera_pardus
ENSSSCG00000034075	-	100	62.637	ENSPPRG00000019275	-	74	62.637	Panthera_pardus
ENSSSCG00000034075	-	87	71.429	ENSPPRG00000022902	-	74	79.762	Panthera_pardus
ENSSSCG00000034075	-	88	45.882	ENSPPRG00000022878	-	72	47.059	Panthera_pardus
ENSSSCG00000034075	-	100	62.637	ENSPTIG00000009786	-	75	62.637	Panthera_tigris_altaica
ENSSSCG00000034075	-	87	70.238	ENSPTIG00000012375	-	74	78.571	Panthera_tigris_altaica
ENSSSCG00000034075	-	87	54.430	ENSPTRG00000049539	-	71	54.430	Pan_troglodytes
ENSSSCG00000034075	-	87	65.823	ENSPTRG00000046545	-	72	65.823	Pan_troglodytes
ENSSSCG00000034075	-	87	62.963	ENSPKIG00000019305	rplp1	73	64.198	Paramormyrops_kingsleyae
ENSSSCG00000034075	-	87	62.500	ENSPSIG00000004041	RPLP1	73	73.171	Pelodiscus_sinensis
ENSSSCG00000034075	-	87	49.412	ENSPREG00000011579	rplp1	74	61.176	Poecilia_reticulata
ENSSSCG00000034075	-	86	53.846	ENSPPYG00000012637	-	69	53.846	Pongo_abelii
ENSSSCG00000034075	-	87	54.430	ENSPCOG00000024532	-	72	61.905	Propithecus_coquereli
ENSSSCG00000034075	-	87	56.250	ENSRNOG00000061507	AABR07032328.1	67	58.228	Rattus_norvegicus
ENSSSCG00000034075	-	99	59.615	ENSRBIG00000032419	-	78	59.615	Rhinopithecus_bieti
ENSSSCG00000034075	-	99	60.577	ENSRROG00000042117	-	78	60.577	Rhinopithecus_roxellana
ENSSSCG00000034075	-	87	76.190	ENSSBOG00000013817	-	74	78.571	Saimiri_boliviensis_boliviensis
ENSSSCG00000034075	-	87	73.810	ENSSBOG00000019582	-	74	76.190	Saimiri_boliviensis_boliviensis
ENSSSCG00000034075	-	87	50.602	ENSTNIG00000009191	rplp1	73	56.627	Tetraodon_nigroviridis
ENSSSCG00000034075	-	70	62.319	ENSTTRG00000017041	-	72	72.464	Tursiops_truncatus
ENSSSCG00000034075	-	87	70.238	ENSTTRG00000013656	RPLP1	74	78.571	Tursiops_truncatus
ENSSSCG00000034075	-	87	70.238	ENSUAMG00000026503	-	74	78.571	Ursus_americanus
ENSSSCG00000034075	-	87	53.165	ENSUAMG00000006170	-	65	53.165	Ursus_americanus
ENSSSCG00000034075	-	86	55.556	ENSUAMG00000015393	-	74	55.556	Ursus_americanus
ENSSSCG00000034075	-	86	55.556	ENSUMAG00000020029	-	74	55.556	Ursus_maritimus
ENSSSCG00000034075	-	87	70.238	ENSUMAG00000010153	-	74	78.571	Ursus_maritimus
ENSSSCG00000034075	-	87	48.101	ENSVVUG00000016935	-	66	50.000	Vulpes_vulpes