EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000034113 (Gene tree)
Gene ID: 100514912
Gene Symbol: -
Alias: -
Full Name: elongation factor 1-alpha%2C oocyte form-like
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 2606 bases
Position: chr9:25500470-25503075
Accession: 100514912
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000015862	GTP_EFTU	PF00009.27	2.4e-55	1	1
ENSSSCP00000015862	GTP_EFTU_D2	PF03144.25	9.5e-14	1	1
ENSSSCP00000015862	GTP_EFTU_D3	PF03143.17	7.7e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000016299	-	1386	XM_003129778	ENSSSCP00000015862	461 (aa)	XP_003129826	F1STM4

Gene Model

Click here to download ENSSSCG00000034113's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000034113's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000034113	-	98	83.628	ENSSSCG00000038035	-	100	83.514
ENSSSCG00000034113	-	99	69.432	ENSSSCG00000031239	-	99	69.432
ENSSSCG00000034113	-	95	37.783	ENSSSCG00000021118	GSPT1	67	37.783
ENSSSCG00000034113	-	92	36.941	ENSSSCG00000012317	GSPT2	64	36.941
ENSSSCG00000034113	-	95	30.405	ENSSSCG00000007803	TUFM	85	30.405
ENSSSCG00000034113	-	99	88.696	ENSSSCG00000004489	-	99	89.865
ENSSSCG00000034113	-	53	59.671	ENSSSCG00000012570	-	97	68.421
ENSSSCG00000034113	-	91	40.191	ENSSSCG00000004169	HBS1L	63	40.191
ENSSSCG00000034113	-	99	88.696	ENSSSCG00000040401	EEF1A2	99	88.696

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000034113	-	67	84.039	ENSAPOG00000004757	eef1a1l1	99	100.000	Acanthochromis_polyacanthus
ENSSSCG00000034113	-	100	85.683	ENSAMEG00000009677	-	100	85.683	Ailuropoda_melanoleuca
ENSSSCG00000034113	-	100	83.514	ENSAMEG00000004317	-	100	83.514	Ailuropoda_melanoleuca
ENSSSCG00000034113	-	100	86.117	ENSCAFG00000013249	-	100	86.117	Canis_familiaris
ENSSSCG00000034113	-	100	86.117	ENSCAFG00020020007	-	100	86.117	Canis_lupus_dingo
ENSSSCG00000034113	-	100	91.106	ENSCPBG00000000748	-	100	91.106	Chrysemys_picta_bellii
ENSSSCG00000034113	-	100	89.588	ENSCPBG00000000646	-	100	89.588	Chrysemys_picta_bellii
ENSSSCG00000034113	-	99	89.130	ENSDARG00000020850	eef1a1l1	99	89.130	Danio_rerio
ENSSSCG00000034113	-	85	90.102	ENSEASG00005018013	-	99	90.102	Equus_asinus_asinus
ENSSSCG00000034113	-	98	94.053	ENSEASG00005012365	-	96	95.498	Equus_asinus_asinus
ENSSSCG00000034113	-	100	91.974	ENSECAG00000022260	-	100	91.974	Equus_caballus
ENSSSCG00000034113	-	100	87.636	ENSELUG00000023536	eef1a1l1	100	87.636	Esox_lucius
ENSSSCG00000034113	-	100	92.625	ENSFCAG00000030530	-	100	92.625	Felis_catus
ENSSSCG00000034113	-	100	90.022	ENSGAGG00000000648	-	100	90.022	Gopherus_agassizii
ENSSSCG00000034113	-	100	91.106	ENSGAGG00000000642	-	100	91.106	Gopherus_agassizii
ENSSSCG00000034113	-	90	85.956	ENSLBEG00000002790	eef1a1l1	99	85.956	Labrus_bergylta
ENSSSCG00000034113	-	100	86.551	ENSLAFG00000028081	-	99	86.551	Loxodonta_africana
ENSSSCG00000034113	-	100	93.709	ENSLAFG00000025161	-	100	93.709	Loxodonta_africana
ENSSSCG00000034113	-	75	91.908	ENSOANG00000012066	-	100	91.908	Ornithorhynchus_anatinus
ENSSSCG00000034113	-	90	86.441	ENSOMEG00000006888	-	99	86.441	Oryzias_melastigma
ENSSSCG00000034113	-	100	94.794	ENSOARG00000002943	-	100	94.794	Ovis_aries
ENSSSCG00000034113	-	97	93.498	ENSPPRG00000005678	-	96	93.498	Panthera_pardus
ENSSSCG00000034113	-	100	85.033	ENSPPRG00000008525	-	100	85.033	Panthera_pardus
ENSSSCG00000034113	-	100	87.202	ENSPTIG00000006939	-	100	87.202	Panthera_tigris_altaica
ENSSSCG00000034113	-	100	90.456	ENSPSIG00000008610	-	100	90.456	Pelodiscus_sinensis
ENSSSCG00000034113	-	66	99.074	ENSPVAG00000007682	-	65	99.074	Pteropus_vampyrus
ENSSSCG00000034113	-	100	82.646	ENSSMAG00000018455	-	99	82.646	Scophthalmus_maximus
ENSSSCG00000034113	-	100	89.588	ENSSPUG00000003655	-	100	89.588	Sphenodon_punctatus
ENSSSCG00000034113	-	51	80.851	ENSUAMG00000006085	-	98	80.851	Ursus_americanus
ENSSSCG00000034113	-	100	83.948	ENSUAMG00000008928	-	100	83.948	Ursus_americanus
ENSSSCG00000034113	-	100	81.345	ENSUAMG00000007676	-	100	81.345	Ursus_americanus
ENSSSCG00000034113	-	100	85.683	ENSUMAG00000013211	-	100	85.683	Ursus_maritimus
ENSSSCG00000034113	-	100	85.900	ENSVVUG00000026886	-	100	85.900	Vulpes_vulpes
ENSSSCG00000034113	-	100	88.503	ENSXETG00000022604	eef1a1o	100	88.503	Xenopus_tropicalis