EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSSSCG00000034448 (Gene tree)
Gene ID
780432
Gene Symbol
-
Alias
-
Full Name
ribosomal protein L13a
Gene Type
protein_coding
Species
Sus_scrofa
Status
putative
Strand
Plus strand
Length
7799 bases
Position
chr6:54564818-54572616
Accession
780432
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSSCP00000052582Ribosomal_L13PF00572.185.1e-1011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSSCT00000046266-4918XM_005664723ENSSSCP00000052582204 (aa)XP_005664780A0A287B929
Gene Model
Click here to download ENSSSCG00000034448's gene model file
Pathways
Pathway IDPathway NameSource
ssc03010RibosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000034448's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSSCG00000034448-9474.479ENSSSCG00000031204-9279.651
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSSCG00000034448-10097.549ENSG00000142541RPL13A10097.887Homo_sapiens
ENSSSCG00000034448-9887.000ENSAPOG00000014084rpl13a9887.000Acanthochromis_polyacanthus
ENSSSCG00000034448-10098.039ENSAMEG00000014027RPL13A10098.039Ailuropoda_melanoleuca
ENSSSCG00000034448-9786.364ENSACIG00000004871rpl13a9986.364Amphilophus_citrinellus
ENSSSCG00000034448-9887.000ENSAOCG00000002123rpl13a9887.000Amphiprion_ocellaris
ENSSSCG00000034448-9887.000ENSAPEG00000018777rpl13a9887.000Amphiprion_percula
ENSSSCG00000034448-9888.000ENSATEG00000012828rpl13a9888.000Anabas_testudineus
ENSSSCG00000034448-9890.452ENSACAG00000017279RPL13A9890.452Anolis_carolinensis
ENSSSCG00000034448-10085.366ENSANAG00000020868-10085.366Aotus_nancymaae
ENSSSCG00000034448-10097.059ENSANAG00000030530RPL13A10097.059Aotus_nancymaae
ENSSSCG00000034448-7081.757ENSANAG00000037443-10081.757Aotus_nancymaae
ENSSSCG00000034448-7095.775ENSANAG00000013769-10095.775Aotus_nancymaae
ENSSSCG00000034448-9883.417ENSANAG00000021423-9883.417Aotus_nancymaae
ENSSSCG00000034448-9886.500ENSACLG00000016552rpl13a9886.500Astatotilapia_calliptera
ENSSSCG00000034448-9886.000ENSAMXG00000033532rpl13a9886.000Astyanax_mexicanus
ENSSSCG00000034448-10097.549ENSBTAG00000005296RPL13A10097.549Bos_taurus
ENSSSCG00000034448-9952.475WBGene00004428rpl-169952.475Caenorhabditis_elegans
ENSSSCG00000034448-10097.059ENSCJAG00000000072-10097.059Callithrix_jacchus
ENSSSCG00000034448-8280.347ENSCJAG00000008837-9880.347Callithrix_jacchus
ENSSSCG00000034448-9890.955ENSCJAG00000046649-9890.955Callithrix_jacchus
ENSSSCG00000034448-10094.608ENSCJAG00000040678-10094.608Callithrix_jacchus
ENSSSCG00000034448-10098.039ENSCAFG00000029892RPL13A10098.039Canis_familiaris
ENSSSCG00000034448-9762.626ENSCAFG00000003946-9662.626Canis_familiaris
ENSSSCG00000034448-10098.039ENSCAFG00020024917-10098.039Canis_lupus_dingo
ENSSSCG00000034448-10097.549ENSCHIG00000021732-10097.549Capra_hircus
ENSSSCG00000034448-10093.627ENSCHIG00000012581-10093.627Capra_hircus
ENSSSCG00000034448-10097.059ENSTSYG00000008791-10097.059Carlito_syrichta
ENSSSCG00000034448-9973.762ENSTSYG00000028115-9776.733Carlito_syrichta
ENSSSCG00000034448-9896.985ENSCAPG00000007267RPL13A10096.985Cavia_aperea
ENSSSCG00000034448-6197.600ENSCPOG00000023083-5993.985Cavia_porcellus
ENSSSCG00000034448-10097.059ENSCPOG00000012417RPL13A10097.059Cavia_porcellus
ENSSSCG00000034448-6990.714ENSCCAG00000020555-10090.714Cebus_capucinus
ENSSSCG00000034448-6997.143ENSCCAG00000029220-9697.143Cebus_capucinus
ENSSSCG00000034448-10097.549ENSCCAG00000022898RPL13A10097.549Cebus_capucinus
ENSSSCG00000034448-9989.655ENSCCAG00000034479-9990.099Cebus_capucinus
ENSSSCG00000034448-10097.059ENSCATG00000011576RPL13A10097.059Cercocebus_atys
ENSSSCG00000034448-10097.059ENSCLAG00000012323RPL13A10097.059Chinchilla_lanigera
ENSSSCG00000034448-10095.588ENSCSAG00000019054-10095.588Chlorocebus_sabaeus
ENSSSCG00000034448-9890.452ENSCPBG00000014922RPL13A9390.404Chrysemys_picta_bellii
ENSSSCG00000034448-9963.861ENSCING00000014892-9863.861Ciona_intestinalis
ENSSSCG00000034448-9965.842ENSCSAVG00000000666-9865.842Ciona_savignyi
ENSSSCG00000034448-10097.059ENSCANG00000040885-10097.059Colobus_angolensis_palliatus
ENSSSCG00000034448-10096.078ENSCANG00000000304-10096.078Colobus_angolensis_palliatus
ENSSSCG00000034448-8183.234ENSCANG00000018732-10083.234Colobus_angolensis_palliatus
ENSSSCG00000034448-10095.588ENSCGRG00001018651-10095.588Cricetulus_griseus_chok1gshd
ENSSSCG00000034448-10095.588ENSCGRG00000005890-10095.588Cricetulus_griseus_crigri
ENSSSCG00000034448-9978.818ENSCSEG00000002640rpl13a9978.818Cynoglossus_semilaevis
ENSSSCG00000034448-9876.000ENSCVAG00000011043rpl13a9776.000Cyprinodon_variegatus
ENSSSCG00000034448-9887.000ENSDARG00000044093rpl13a9887.000Danio_rerio
ENSSSCG00000034448-10096.569ENSDNOG00000035370-10096.569Dasypus_novemcinctus
ENSSSCG00000034448-10096.078ENSDORG00000012194-10096.078Dipodomys_ordii
ENSSSCG00000034448-9858.000FBgn0037351RpL13A9858.000Drosophila_melanogaster
ENSSSCG00000034448-10093.137ENSETEG00000005732-10093.137Echinops_telfairi
ENSSSCG00000034448-10078.431ENSETEG00000017076-10078.431Echinops_telfairi
ENSSSCG00000034448-9869.500ENSEBUG00000007234rpl13a10068.617Eptatretus_burgeri
ENSSSCG00000034448-9798.485ENSEASG00005005007RPL13A8698.485Equus_asinus_asinus
ENSSSCG00000034448-10098.039ENSECAG00000015832RPL13A10098.039Equus_caballus
ENSSSCG00000034448-7496.026ENSEEUG00000014071RPL13A7496.026Erinaceus_europaeus
ENSSSCG00000034448-9886.000ENSELUG00000014577rpl13a9886.000Esox_lucius
ENSSSCG00000034448-10096.078ENSFCAG00000009194RPL13A10096.078Felis_catus
ENSSSCG00000034448-10097.549ENSFDAG00000016892RPL13A10097.549Fukomys_damarensis
ENSSSCG00000034448-9887.000ENSFHEG00000004165rpl13a9887.000Fundulus_heteroclitus
ENSSSCG00000034448-9885.427ENSGMOG00000010791rpl13a9385.427Gadus_morhua
ENSSSCG00000034448-9887.000ENSGAFG00000007578rpl13a9887.000Gambusia_affinis
ENSSSCG00000034448-9887.940ENSGACG00000009310rpl13a9987.000Gasterosteus_aculeatus
ENSSSCG00000034448-9483.333ENSGAGG00000002437RPL13A7483.333Gopherus_agassizii
ENSSSCG00000034448-10095.098ENSGGOG00000023324-10095.098Gorilla_gorilla
ENSSSCG00000034448-6793.431ENSGGOG00000039904-7293.431Gorilla_gorilla
ENSSSCG00000034448-10097.549ENSGGOG00000002932RPL13A10097.549Gorilla_gorilla
ENSSSCG00000034448-6693.333ENSGGOG00000039250-8293.333Gorilla_gorilla
ENSSSCG00000034448-9886.500ENSHBUG00000023575rpl13a9886.500Haplochromis_burtoni
ENSSSCG00000034448-10097.549ENSHGLG00000010070RPL13A10097.990Heterocephalus_glaber_female
ENSSSCG00000034448-10097.549ENSHGLG00100010359RPL13A10097.549Heterocephalus_glaber_male
ENSSSCG00000034448-9886.000ENSHCOG00000007902rpl13a9986.869Hippocampus_comes
ENSSSCG00000034448-9885.930ENSIPUG00000014098rpl13a9485.930Ictalurus_punctatus
ENSSSCG00000034448-10094.608ENSSTOG00000021558RPL13A9996.970Ictidomys_tridecemlineatus
ENSSSCG00000034448-10097.549ENSJJAG00000000343-10097.549Jaculus_jaculus
ENSSSCG00000034448-9886.000ENSKMAG00000009039rpl13a9886.000Kryptolebias_marmoratus
ENSSSCG00000034448-9887.000ENSLBEG00000005434rpl13a9887.000Labrus_bergylta
ENSSSCG00000034448-9683.838ENSLACG00000019092RPL13A9583.838Latimeria_chalumnae
ENSSSCG00000034448-9887.500ENSLOCG00000004388rpl13a9887.500Lepisosteus_oculatus
ENSSSCG00000034448-10097.059ENSLAFG00000016213RPL13A10097.059Loxodonta_africana
ENSSSCG00000034448-10086.275ENSMFAG00000003121-10086.765Macaca_fascicularis
ENSSSCG00000034448-10089.474ENSMFAG00000002765-10089.474Macaca_fascicularis
ENSSSCG00000034448-10097.059ENSMFAG00000001097-10097.183Macaca_fascicularis
ENSSSCG00000034448-10089.474ENSMMUG00000009018-10089.474Macaca_mulatta
ENSSSCG00000034448-10097.059ENSMMUG00000007551RPL13A10097.059Macaca_mulatta
ENSSSCG00000034448-10097.059ENSMNEG00000034977RPL13A10097.059Macaca_nemestrina
ENSSSCG00000034448-5898.319ENSMLEG00000038132-10098.319Mandrillus_leucophaeus
ENSSSCG00000034448-9887.000ENSMAMG00000007425rpl13a8487.000Mastacembelus_armatus
ENSSSCG00000034448-9886.500ENSMZEG00005004952rpl13a9886.500Maylandia_zebra
ENSSSCG00000034448-10095.588ENSMAUG00000016402-10095.588Mesocricetus_auratus
ENSSSCG00000034448-10082.843ENSMAUG00000012558-10082.843Mesocricetus_auratus
ENSSSCG00000034448-10090.686ENSMAUG00000020351-10090.686Mesocricetus_auratus
ENSSSCG00000034448-10098.039ENSMICG00000009318-10098.039Microcebus_murinus
ENSSSCG00000034448-10075.980ENSMICG00000043457-10075.980Microcebus_murinus
ENSSSCG00000034448-10095.588ENSMOCG00000002774-10095.588Microtus_ochrogaster
ENSSSCG00000034448-10076.961ENSMOCG00000016427-10076.961Microtus_ochrogaster
ENSSSCG00000034448-9887.940ENSMMOG00000010248rpl13a9887.940Mola_mola
ENSSSCG00000034448-9886.500ENSMALG00000012804rpl13a9886.500Monopterus_albus
ENSSSCG00000034448-10094.608MGP_CAROLIEiJ_G0029698-10094.608Mus_caroli
ENSSSCG00000034448-10095.098ENSMUSG00000074129Rpl13a10095.098Mus_musculus
ENSSSCG00000034448-10094.608MGP_PahariEiJ_G0012923-10094.608Mus_pahari
ENSSSCG00000034448-10095.098MGP_SPRETEiJ_G0030796Rpl13a10095.098Mus_spretus
ENSSSCG00000034448-10092.157MGP_SPRETEiJ_G0017763-10092.157Mus_spretus
ENSSSCG00000034448-10097.549ENSMPUG00000002604RPL13A10097.549Mustela_putorius_furo
ENSSSCG00000034448-9897.500ENSMLUG00000004945RPL13A9997.500Myotis_lucifugus
ENSSSCG00000034448-10097.059ENSNGAG00000021984-10097.059Nannospalax_galili
ENSSSCG00000034448-10085.294ENSNBRG00000024166rpl13a9886.500Neolamprologus_brichardi
ENSSSCG00000034448-10092.647ENSNLEG00000033213-10092.647Nomascus_leucogenys
ENSSSCG00000034448-9891.960ENSNLEG00000012957-9691.960Nomascus_leucogenys
ENSSSCG00000034448-10089.372ENSNLEG00000005211RPL13A10089.372Nomascus_leucogenys
ENSSSCG00000034448-8582.081ENSMEUG00000005199RPL13A10082.081Notamacropus_eugenii
ENSSSCG00000034448-10092.157ENSOPRG00000001194RPL13A10092.157Ochotona_princeps
ENSSSCG00000034448-10096.078ENSODEG00000020233-10096.078Octodon_degus
ENSSSCG00000034448-10097.059ENSODEG00000020468-10097.059Octodon_degus
ENSSSCG00000034448-10097.549ENSODEG00000016831-10097.549Octodon_degus
ENSSSCG00000034448-10096.569ENSODEG00000019218-10096.569Octodon_degus
ENSSSCG00000034448-9886.000ENSONIG00000003560rpl13a9886.000Oreochromis_niloticus
ENSSSCG00000034448-10092.157ENSOANG00000000828RPL13A10092.157Ornithorhynchus_anatinus
ENSSSCG00000034448-7983.333ENSOCUG00000026592-10083.333Oryctolagus_cuniculus
ENSSSCG00000034448-9886.000ENSORLG00000014599rpl13a8886.000Oryzias_latipes
ENSSSCG00000034448-9886.000ENSORLG00020013090rpl13a8886.000Oryzias_latipes_hni
ENSSSCG00000034448-10084.466ENSORLG00015011634rpl13a10084.466Oryzias_latipes_hsok
ENSSSCG00000034448-9887.000ENSOMEG00000010232rpl13a8887.000Oryzias_melastigma
ENSSSCG00000034448-9995.098ENSOGAG00000030280-9995.098Otolemur_garnettii
ENSSSCG00000034448-10097.549ENSOGAG00000004625-10097.549Otolemur_garnettii
ENSSSCG00000034448-10090.196ENSOGAG00000026177-10090.196Otolemur_garnettii
ENSSSCG00000034448-10095.588ENSOARG00000013169-10095.588Ovis_aries
ENSSSCG00000034448-10096.078ENSOARG00000020159-10096.078Ovis_aries
ENSSSCG00000034448-9778.173ENSOARG00000017798-9678.173Ovis_aries
ENSSSCG00000034448-10097.549ENSPPAG00000037365RPL13A10097.549Pan_paniscus
ENSSSCG00000034448-10093.137ENSPPAG00000019107-10093.137Pan_paniscus
ENSSSCG00000034448-6793.431ENSPPAG00000006023-7193.431Pan_paniscus
ENSSSCG00000034448-10094.608ENSPPAG00000023659-10094.608Pan_paniscus
ENSSSCG00000034448-10096.078ENSPPRG00000011265RPL13A10096.078Panthera_pardus
ENSSSCG00000034448-10096.078ENSPTRG00000050666-10096.078Pan_troglodytes
ENSSSCG00000034448-6798.529ENSPTRG00000052284-9298.529Pan_troglodytes
ENSSSCG00000034448-10093.137ENSPTRG00000049426-10093.137Pan_troglodytes
ENSSSCG00000034448-7097.183ENSPTRG00000042978-10097.183Pan_troglodytes
ENSSSCG00000034448-10097.549ENSPTRG00000011298RPL13A10097.549Pan_troglodytes
ENSSSCG00000034448-10097.059ENSPANG00000012050RPL13A10097.059Papio_anubis
ENSSSCG00000034448-9886.000ENSPKIG00000000720rpl13a9886.000Paramormyrops_kingsleyae
ENSSSCG00000034448-9890.452ENSPSIG00000018234RPL13A10090.452Pelodiscus_sinensis
ENSSSCG00000034448-9887.437ENSPMGG00000010552rpl13a9687.437Periophthalmus_magnuspinnatus
ENSSSCG00000034448-10096.078ENSPEMG00000009221-10096.078Peromyscus_maniculatus_bairdii
ENSSSCG00000034448-9886.500ENSPMAG00000006362rpl13a9886.500Petromyzon_marinus
ENSSSCG00000034448-10092.647ENSPCIG00000007340-10092.647Phascolarctos_cinereus
ENSSSCG00000034448-8375.740ENSPCIG00000014063-9075.740Phascolarctos_cinereus
ENSSSCG00000034448-9886.000ENSPFOG00000013546rpl13a9886.000Poecilia_formosa
ENSSSCG00000034448-9886.000ENSPLAG00000016066rpl13a9886.000Poecilia_latipinna
ENSSSCG00000034448-9886.000ENSPMEG00000018384rpl13a9886.000Poecilia_mexicana
ENSSSCG00000034448-9886.000ENSPREG00000020079rpl13a9886.000Poecilia_reticulata
ENSSSCG00000034448-10097.549ENSPPYG00000006798-10097.549Pongo_abelii
ENSSSCG00000034448-10097.549ENSPPYG00000010251-10097.549Pongo_abelii
ENSSSCG00000034448-10096.569ENSPCAG00000004086RPL13A10096.569Procavia_capensis
ENSSSCG00000034448-10098.039ENSPCOG00000023898RPL13A10098.039Propithecus_coquereli
ENSSSCG00000034448-9879.310ENSPCOG00000016293-9879.310Propithecus_coquereli
ENSSSCG00000034448-10097.549ENSPVAG00000010958RPL13A10097.549Pteropus_vampyrus
ENSSSCG00000034448-9886.500ENSPNYG00000019779rpl13a9886.500Pundamilia_nyererei
ENSSSCG00000034448-9885.930ENSPNAG00000026887rpl13a9785.930Pygocentrus_nattereri
ENSSSCG00000034448-10096.078ENSRNOG00000062298Rpl13a10096.078Rattus_norvegicus
ENSSSCG00000034448-10097.059ENSRBIG00000044737RPL13A9997.059Rhinopithecus_bieti
ENSSSCG00000034448-10097.059ENSRROG00000042976-10097.059Rhinopithecus_roxellana
ENSSSCG00000034448-6490.909ENSRROG00000028369-6690.909Rhinopithecus_roxellana
ENSSSCG00000034448-10089.706ENSRROG00000036041-10089.706Rhinopithecus_roxellana
ENSSSCG00000034448-9356.410YNL069CRPL16B9856.923Saccharomyces_cerevisiae
ENSSSCG00000034448-8562.428YIL133CRPL16A8762.428Saccharomyces_cerevisiae
ENSSSCG00000034448-10096.569ENSSBOG00000028481RPL13A10096.985Saimiri_boliviensis_boliviensis
ENSSSCG00000034448-10079.186ENSSBOG00000024635-10079.186Saimiri_boliviensis_boliviensis
ENSSSCG00000034448-9884.000ENSSFOG00015001972rpl13a9884.000Scleropages_formosus
ENSSSCG00000034448-9886.935ENSSDUG00000017181rpl13a10086.935Seriola_dumerili
ENSSSCG00000034448-8261.078ENSSLDG00000007920-9557.754Seriola_lalandi_dorsalis
ENSSSCG00000034448-9886.500ENSSLDG00000002561rpl13a9886.500Seriola_lalandi_dorsalis
ENSSSCG00000034448-5274.312ENSSPUG00000014548RPL13A8674.312Sphenodon_punctatus
ENSSSCG00000034448-9886.500ENSTRUG00000023611rpl13a9886.500Takifugu_rubripes
ENSSSCG00000034448-10099.020ENSTTRG00000005485RPL13A10099.020Tursiops_truncatus
ENSSSCG00000034448-10098.039ENSUAMG00000008438RPL13A10098.039Ursus_americanus
ENSSSCG00000034448-10098.039ENSUMAG00000002385RPL13A10098.039Ursus_maritimus
ENSSSCG00000034448-9795.455ENSVPAG00000006564RPL13A10095.455Vicugna_pacos
ENSSSCG00000034448-10098.039ENSVVUG00000022597RPL13A10098.039Vulpes_vulpes
ENSSSCG00000034448-9989.109ENSXETG00000014144rpl13a8789.109Xenopus_tropicalis
ENSSSCG00000034448-9887.000ENSXCOG00000004826rpl13a9887.000Xiphophorus_couchianus
ENSSSCG00000034448-9887.000ENSXMAG00000027604rpl13a9887.000Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0006412translation-IEAProcess
GO:0017148negative regulation of translation-ISSProcess
GO:0097452GAIT complex-ISSComponent
GO:1901194negative regulation of formation of translation preinitiation complex-ISSProcess

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