EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000034476 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 3310 bases
Position: chr4:45965977-45969286
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000045682	Exo_endo_phos	PF03372.23	1.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000046976	-	1275	-	ENSSSCP00000045682	424 (aa)	-	A0A287ANN8

Gene Model

Click here to download ENSSSCG00000034476's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000034476's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000034476	-	74	85.489	ENSSSCG00000011465	-	52	85.489

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000034476	-	74	84.543	ENSG00000174840	PDE12	52	84.543	Homo_sapiens
ENSSSCG00000034476	-	74	57.453	ENSAPOG00000018806	pde12	54	57.453	Acanthochromis_polyacanthus
ENSSSCG00000034476	-	74	83.596	ENSAMEG00000011802	PDE12	56	83.544	Ailuropoda_melanoleuca
ENSSSCG00000034476	-	74	56.790	ENSACIG00000014918	pde12	54	56.790	Amphilophus_citrinellus
ENSSSCG00000034476	-	74	56.563	ENSAOCG00000016376	pde12	55	56.563	Amphiprion_ocellaris
ENSSSCG00000034476	-	74	56.563	ENSAPEG00000000756	pde12	55	56.563	Amphiprion_percula
ENSSSCG00000034476	-	74	56.250	ENSATEG00000003072	pde12	57	56.250	Anabas_testudineus
ENSSSCG00000034476	-	73	66.246	ENSACAG00000003067	PDE12	54	66.246	Anolis_carolinensis
ENSSSCG00000034476	-	74	83.281	ENSANAG00000011815	PDE12	52	83.281	Aotus_nancymaae
ENSSSCG00000034476	-	74	55.312	ENSACLG00000010127	pde12	55	55.312	Astatotilapia_calliptera
ENSSSCG00000034476	-	74	60.502	ENSAMXG00000020765	pde12	53	60.502	Astyanax_mexicanus
ENSSSCG00000034476	-	74	83.912	ENSBTAG00000015563	PDE12	52	83.912	Bos_taurus
ENSSSCG00000034476	-	74	84.858	ENSCJAG00000019905	PDE12	52	84.858	Callithrix_jacchus
ENSSSCG00000034476	-	74	84.227	ENSCAFG00000007792	PDE12	51	84.227	Canis_familiaris
ENSSSCG00000034476	-	74	84.227	ENSCAFG00020006692	PDE12	51	84.227	Canis_lupus_dingo
ENSSSCG00000034476	-	74	84.227	ENSCHIG00000014202	PDE12	52	84.227	Capra_hircus
ENSSSCG00000034476	-	74	82.650	ENSTSYG00000025750	PDE12	52	82.650	Carlito_syrichta
ENSSSCG00000034476	-	74	80.442	ENSCPOG00000001620	PDE12	52	80.442	Cavia_porcellus
ENSSSCG00000034476	-	74	84.543	ENSCATG00000044539	PDE12	52	84.543	Cercocebus_atys
ENSSSCG00000034476	-	74	79.180	ENSCLAG00000004864	PDE12	52	79.180	Chinchilla_lanigera
ENSSSCG00000034476	-	74	83.912	ENSCSAG00000012275	PDE12	52	83.912	Chlorocebus_sabaeus
ENSSSCG00000034476	-	74	83.281	ENSCHOG00000012173	-	77	83.544	Choloepus_hoffmanni
ENSSSCG00000034476	-	74	83.281	ENSCHOG00000002188	-	52	83.281	Choloepus_hoffmanni
ENSSSCG00000034476	-	74	73.270	ENSCPBG00000012353	PDE12	52	73.270	Chrysemys_picta_bellii
ENSSSCG00000034476	-	72	40.125	ENSCING00000006903	-	69	40.125	Ciona_intestinalis
ENSSSCG00000034476	-	56	37.551	ENSCSAVG00000001453	-	97	37.551	Ciona_savignyi
ENSSSCG00000034476	-	74	84.543	ENSCANG00000038723	PDE12	52	84.543	Colobus_angolensis_palliatus
ENSSSCG00000034476	-	74	83.596	ENSCGRG00001021836	Pde12	52	83.596	Cricetulus_griseus_chok1gshd
ENSSSCG00000034476	-	74	83.596	ENSCGRG00000012319	Pde12	52	83.596	Cricetulus_griseus_crigri
ENSSSCG00000034476	-	74	54.688	ENSCSEG00000018538	pde12	57	54.688	Cynoglossus_semilaevis
ENSSSCG00000034476	-	72	56.230	ENSDARG00000030964	pde12	53	56.230	Danio_rerio
ENSSSCG00000034476	-	74	82.019	ENSDNOG00000048413	PDE12	52	82.019	Dasypus_novemcinctus
ENSSSCG00000034476	-	74	81.703	ENSDORG00000004313	Pde12	52	81.703	Dipodomys_ordii
ENSSSCG00000034476	-	73	35.168	FBgn0051759	CG31759	58	35.168	Drosophila_melanogaster
ENSSSCG00000034476	-	74	84.543	ENSEASG00005000644	PDE12	52	84.543	Equus_asinus_asinus
ENSSSCG00000034476	-	74	84.543	ENSECAG00000005326	PDE12	52	84.543	Equus_caballus
ENSSSCG00000034476	-	73	59.554	ENSELUG00000014391	pde12	53	59.554	Esox_lucius
ENSSSCG00000034476	-	74	83.912	ENSFCAG00000031696	PDE12	52	83.912	Felis_catus
ENSSSCG00000034476	-	73	71.746	ENSFALG00000008401	PDE12	66	71.746	Ficedula_albicollis
ENSSSCG00000034476	-	74	81.388	ENSFDAG00000021278	PDE12	52	81.388	Fukomys_damarensis
ENSSSCG00000034476	-	73	54.747	ENSGMOG00000018041	pde12	56	54.747	Gadus_morhua
ENSSSCG00000034476	-	82	62.740	ENSGALG00000052355	PDE12	63	62.740	Gallus_gallus
ENSSSCG00000034476	-	72	57.962	ENSGAFG00000002045	pde12	55	57.962	Gambusia_affinis
ENSSSCG00000034476	-	74	56.250	ENSGACG00000003914	pde12	54	56.250	Gasterosteus_aculeatus
ENSSSCG00000034476	-	74	73.270	ENSGAGG00000010266	PDE12	52	73.270	Gopherus_agassizii
ENSSSCG00000034476	-	74	84.227	ENSGGOG00000003312	PDE12	52	84.227	Gorilla_gorilla
ENSSSCG00000034476	-	74	55.625	ENSHBUG00000023370	pde12	54	55.312	Haplochromis_burtoni
ENSSSCG00000034476	-	74	81.073	ENSHGLG00000005661	PDE12	52	81.073	Heterocephalus_glaber_female
ENSSSCG00000034476	-	74	81.073	ENSHGLG00100001136	PDE12	52	81.073	Heterocephalus_glaber_male
ENSSSCG00000034476	-	74	52.599	ENSHCOG00000013749	pde12	54	52.599	Hippocampus_comes
ENSSSCG00000034476	-	73	60.828	ENSIPUG00000007123	Pde12	54	60.828	Ictalurus_punctatus
ENSSSCG00000034476	-	74	83.912	ENSSTOG00000007861	PDE12	52	83.912	Ictidomys_tridecemlineatus
ENSSSCG00000034476	-	74	81.073	ENSJJAG00000006038	Pde12	51	81.073	Jaculus_jaculus
ENSSSCG00000034476	-	74	58.438	ENSKMAG00000018523	pde12	55	58.255	Kryptolebias_marmoratus
ENSSSCG00000034476	-	74	56.875	ENSLBEG00000009762	PDE12	53	56.875	Labrus_bergylta
ENSSSCG00000034476	-	74	57.500	ENSLBEG00000026775	pde12	54	57.500	Labrus_bergylta
ENSSSCG00000034476	-	74	67.398	ENSLACG00000015492	PDE12	54	67.398	Latimeria_chalumnae
ENSSSCG00000034476	-	74	63.323	ENSLOCG00000013277	pde12	54	63.323	Lepisosteus_oculatus
ENSSSCG00000034476	-	74	83.596	ENSLAFG00000002821	PDE12	56	83.596	Loxodonta_africana
ENSSSCG00000034476	-	74	84.543	ENSMFAG00000030966	PDE12	52	84.543	Macaca_fascicularis
ENSSSCG00000034476	-	74	84.543	ENSMMUG00000004052	PDE12	52	84.543	Macaca_mulatta
ENSSSCG00000034476	-	74	84.543	ENSMNEG00000030068	PDE12	52	84.543	Macaca_nemestrina
ENSSSCG00000034476	-	74	84.543	ENSMLEG00000036137	PDE12	52	84.543	Mandrillus_leucophaeus
ENSSSCG00000034476	-	74	56.875	ENSMAMG00000014415	pde12	54	56.875	Mastacembelus_armatus
ENSSSCG00000034476	-	74	55.625	ENSMZEG00005016132	pde12	54	55.625	Maylandia_zebra
ENSSSCG00000034476	-	74	52.188	ENSMZEG00005028202	-	56	52.188	Maylandia_zebra
ENSSSCG00000034476	-	73	70.032	ENSMGAG00000006449	PDE12	98	70.032	Meleagris_gallopavo
ENSSSCG00000034476	-	73	82.222	ENSMAUG00000000442	Pde12	56	82.222	Mesocricetus_auratus
ENSSSCG00000034476	-	74	82.965	ENSMICG00000005723	PDE12	52	82.965	Microcebus_murinus
ENSSSCG00000034476	-	74	81.388	ENSMOCG00000020734	Pde12	53	81.388	Microtus_ochrogaster
ENSSSCG00000034476	-	79	53.509	ENSMMOG00000013636	pde12	56	53.509	Mola_mola
ENSSSCG00000034476	-	74	68.339	ENSMODG00000000155	PDE12	53	68.339	Monodelphis_domestica
ENSSSCG00000034476	-	74	55.763	ENSMALG00000022647	pde12	56	55.763	Monopterus_albus
ENSSSCG00000034476	-	74	81.073	MGP_CAROLIEiJ_G0019032	Pde12	52	81.073	Mus_caroli
ENSSSCG00000034476	-	74	80.126	ENSMUSG00000043702	Pde12	52	80.126	Mus_musculus
ENSSSCG00000034476	-	74	80.442	MGP_PahariEiJ_G0030049	Pde12	52	80.442	Mus_pahari
ENSSSCG00000034476	-	74	80.757	MGP_SPRETEiJ_G0019916	Pde12	52	80.757	Mus_spretus
ENSSSCG00000034476	-	74	84.543	ENSMPUG00000016869	PDE12	52	84.543	Mustela_putorius_furo
ENSSSCG00000034476	-	74	84.227	ENSMLUG00000026487	PDE12	52	84.227	Myotis_lucifugus
ENSSSCG00000034476	-	73	80.511	ENSNGAG00000001228	Pde12	52	80.511	Nannospalax_galili
ENSSSCG00000034476	-	74	84.227	ENSNLEG00000007269	-	52	84.227	Nomascus_leucogenys
ENSSSCG00000034476	-	74	81.931	ENSNLEG00000034833	-	55	81.931	Nomascus_leucogenys
ENSSSCG00000034476	-	74	69.811	ENSMEUG00000006786	PDE12	55	69.811	Notamacropus_eugenii
ENSSSCG00000034476	-	73	81.587	ENSOPRG00000015273	PDE12	51	81.587	Ochotona_princeps
ENSSSCG00000034476	-	74	82.019	ENSODEG00000006268	PDE12	52	82.019	Octodon_degus
ENSSSCG00000034476	-	74	55.312	ENSONIG00000004293	pde12	57	55.312	Oreochromis_niloticus
ENSSSCG00000034476	-	66	71.479	ENSOANG00000012885	PDE12	51	71.479	Ornithorhynchus_anatinus
ENSSSCG00000034476	-	74	83.596	ENSOCUG00000000823	PDE12	52	83.596	Oryctolagus_cuniculus
ENSSSCG00000034476	-	74	55.763	ENSORLG00000017444	pde12	54	55.763	Oryzias_latipes
ENSSSCG00000034476	-	74	55.763	ENSORLG00020010469	pde12	54	55.763	Oryzias_latipes_hni
ENSSSCG00000034476	-	74	55.452	ENSORLG00015004093	pde12	54	55.452	Oryzias_latipes_hsok
ENSSSCG00000034476	-	74	55.452	ENSOMEG00000020900	pde12	55	55.452	Oryzias_melastigma
ENSSSCG00000034476	-	74	82.965	ENSOGAG00000024093	PDE12	52	82.965	Otolemur_garnettii
ENSSSCG00000034476	-	74	84.227	ENSOARG00000013642	PDE12	57	84.227	Ovis_aries
ENSSSCG00000034476	-	74	83.912	ENSPPAG00000034712	PDE12	52	83.912	Pan_paniscus
ENSSSCG00000034476	-	74	83.912	ENSPPRG00000011738	PDE12	52	83.912	Panthera_pardus
ENSSSCG00000034476	-	74	83.912	ENSPTIG00000019166	PDE12	60	83.912	Panthera_tigris_altaica
ENSSSCG00000034476	-	74	84.227	ENSPTRG00000030221	PDE12	52	84.227	Pan_troglodytes
ENSSSCG00000034476	-	74	84.543	ENSPANG00000007324	PDE12	52	84.543	Papio_anubis
ENSSSCG00000034476	-	75	57.846	ENSPKIG00000025354	pde12	56	57.846	Paramormyrops_kingsleyae
ENSSSCG00000034476	-	74	74.214	ENSPSIG00000004926	PDE12	52	74.214	Pelodiscus_sinensis
ENSSSCG00000034476	-	74	55.140	ENSPMGG00000006742	pde12	57	55.000	Periophthalmus_magnuspinnatus
ENSSSCG00000034476	-	74	81.073	ENSPEMG00000007259	Pde12	61	81.073	Peromyscus_maniculatus_bairdii
ENSSSCG00000034476	-	74	56.832	ENSPFOG00000011864	pde12	54	56.832	Poecilia_formosa
ENSSSCG00000034476	-	74	57.009	ENSPLAG00000023871	pde12	60	57.009	Poecilia_latipinna
ENSSSCG00000034476	-	74	57.009	ENSPMEG00000005674	pde12	55	57.009	Poecilia_mexicana
ENSSSCG00000034476	-	74	57.009	ENSPREG00000022831	pde12	55	57.009	Poecilia_reticulata
ENSSSCG00000034476	-	74	84.543	ENSPPYG00000013769	PDE12	52	84.543	Pongo_abelii
ENSSSCG00000034476	-	74	83.596	ENSPCOG00000026004	PDE12	52	83.596	Propithecus_coquereli
ENSSSCG00000034476	-	74	84.227	ENSPVAG00000008885	PDE12	52	84.227	Pteropus_vampyrus
ENSSSCG00000034476	-	74	55.937	ENSPNYG00000013258	pde12	54	55.937	Pundamilia_nyererei
ENSSSCG00000034476	-	73	63.376	ENSPNAG00000029032	pde12	55	62.382	Pygocentrus_nattereri
ENSSSCG00000034476	-	74	81.388	ENSRNOG00000059442	Pde12	52	81.388	Rattus_norvegicus
ENSSSCG00000034476	-	74	84.543	ENSRBIG00000040704	PDE12	52	84.543	Rhinopithecus_bieti
ENSSSCG00000034476	-	74	84.543	ENSRROG00000031279	PDE12	52	84.543	Rhinopithecus_roxellana
ENSSSCG00000034476	-	74	83.912	ENSSBOG00000023974	PDE12	65	71.139	Saimiri_boliviensis_boliviensis
ENSSSCG00000034476	-	73	56.688	ENSSFOG00015003468	pde12	59	56.688	Scleropages_formosus
ENSSSCG00000034476	-	74	56.698	ENSSMAG00000003258	pde12	55	56.698	Scophthalmus_maximus
ENSSSCG00000034476	-	74	56.875	ENSSDUG00000020470	pde12	54	56.875	Seriola_dumerili
ENSSSCG00000034476	-	74	57.500	ENSSLDG00000019833	pde12	55	57.500	Seriola_lalandi_dorsalis
ENSSSCG00000034476	-	74	81.703	ENSSARG00000007201	PDE12	53	81.703	Sorex_araneus
ENSSSCG00000034476	-	74	56.875	ENSSPAG00000014980	pde12	54	56.875	Stegastes_partitus
ENSSSCG00000034476	-	73	72.063	ENSTGUG00000007290	PDE12	85	72.063	Taeniopygia_guttata
ENSSSCG00000034476	-	74	56.875	ENSTRUG00000005159	pde12	54	56.875	Takifugu_rubripes
ENSSSCG00000034476	-	74	55.590	ENSTNIG00000017497	pde12	55	55.590	Tetraodon_nigroviridis
ENSSSCG00000034476	-	71	84.106	ENSTBEG00000008202	PDE12	51	84.106	Tupaia_belangeri
ENSSSCG00000034476	-	74	84.227	ENSTTRG00000014707	PDE12	52	84.227	Tursiops_truncatus
ENSSSCG00000034476	-	74	84.227	ENSUAMG00000020634	-	52	84.227	Ursus_americanus
ENSSSCG00000034476	-	74	84.227	ENSUMAG00000021906	PDE12	73	84.227	Ursus_maritimus
ENSSSCG00000034476	-	74	84.543	ENSVVUG00000020335	PDE12	51	84.543	Vulpes_vulpes
ENSSSCG00000034476	-	73	57.962	ENSXETG00000008653	pde12	57	57.962	Xenopus_tropicalis
ENSSSCG00000034476	-	74	57.321	ENSXCOG00000000407	pde12	56	57.321	Xiphophorus_couchianus
ENSSSCG00000034476	-	74	57.321	ENSXMAG00000013370	pde12	55	57.321	Xiphophorus_maculatus