EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000034484 (Gene tree)
Gene ID: 100620266
Gene Symbol: SPEN
Alias: KIAA0929|MINT|RBM15C|SHARP
Full Name: spen family transcriptional repressor
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 102387 bases
Position: chr6:75001088-75103474
Accession: 100620266
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000031666	RRM_5	PF13893.6	2.4e-07	1	2
ENSSSCP00000031666	RRM_5	PF13893.6	2.4e-07	2	2
ENSSSCP00000057938	RRM_5	PF13893.6	1.9e-06	1	2
ENSSSCP00000057938	RRM_5	PF13893.6	1.9e-06	2	2
ENSSSCP00000031666	RRM_1	PF00076.22	1.4e-43	1	4
ENSSSCP00000031666	RRM_1	PF00076.22	1.4e-43	2	4
ENSSSCP00000031666	RRM_1	PF00076.22	1.4e-43	3	4
ENSSSCP00000031666	RRM_1	PF00076.22	1.4e-43	4	4
ENSSSCP00000057938	RRM_1	PF00076.22	3.9e-34	1	3
ENSSSCP00000057938	RRM_1	PF00076.22	3.9e-34	2	3
ENSSSCP00000057938	RRM_1	PF00076.22	3.9e-34	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000064339	SPEN-202	9825	XM_021095393	ENSSSCP00000031666	3129 (aa)	XP_020951052	A0A286ZJD3
ENSSSCT00000042154	SPEN-201	10010	-	ENSSSCP00000057938	3154 (aa)	-	A0A287BPC2

Gene Model

Click here to download ENSSSCG00000034484's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000034484's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000034484	SPEN	99	87.945	ENSG00000065526	SPEN	99	99.663	Homo_sapiens
ENSSSCG00000034484	SPEN	79	60.454	ENSAPOG00000011411	si:ch1073-335m2.2	76	60.099	Acanthochromis_polyacanthus
ENSSSCG00000034484	SPEN	84	81.461	ENSAPOG00000009853	-	91	74.906	Acanthochromis_polyacanthus
ENSSSCG00000034484	SPEN	99	89.634	ENSAMEG00000011817	SPEN	86	89.882	Ailuropoda_melanoleuca
ENSSSCG00000034484	SPEN	75	42.892	ENSAOCG00000008077	si:ch1073-335m2.2	78	42.885	Amphiprion_ocellaris
ENSSSCG00000034484	SPEN	84	81.461	ENSAOCG00000014505	-	86	46.039	Amphiprion_ocellaris
ENSSSCG00000034484	SPEN	84	81.461	ENSAPEG00000010288	-	86	45.999	Amphiprion_percula
ENSSSCG00000034484	SPEN	80	60.552	ENSAPEG00000013515	si:ch1073-335m2.2	77	60.000	Amphiprion_percula
ENSSSCG00000034484	SPEN	64	52.738	ENSATEG00000007674	si:ch1073-335m2.2	57	52.528	Anabas_testudineus
ENSSSCG00000034484	SPEN	84	82.584	ENSATEG00000005627	-	85	45.190	Anabas_testudineus
ENSSSCG00000034484	SPEN	96	63.166	ENSACAG00000013761	SPEN	85	63.544	Anolis_carolinensis
ENSSSCG00000034484	SPEN	99	86.890	ENSANAG00000034428	SPEN	85	87.145	Aotus_nancymaae
ENSSSCG00000034484	SPEN	84	81.461	ENSACLG00000016922	-	76	49.236	Astatotilapia_calliptera
ENSSSCG00000034484	SPEN	62	52.644	ENSACLG00000021433	si:ch1073-335m2.2	77	44.841	Astatotilapia_calliptera
ENSSSCG00000034484	SPEN	84	83.240	ENSAMXG00000012485	spen	86	48.041	Astyanax_mexicanus
ENSSSCG00000034484	SPEN	99	91.132	ENSBTAG00000018729	SPEN	86	91.164	Bos_taurus
ENSSSCG00000034484	SPEN	99	87.170	ENSCJAG00000008527	SPEN	85	87.424	Callithrix_jacchus
ENSSSCG00000034484	SPEN	99	88.075	ENSCAFG00000016132	-	96	88.289	Canis_familiaris
ENSSSCG00000034484	SPEN	99	91.388	ENSCHIG00000025070	SPEN	86	91.579	Capra_hircus
ENSSSCG00000034484	SPEN	90	85.538	ENSTSYG00000036016	SPEN	84	86.067	Carlito_syrichta
ENSSSCG00000034484	SPEN	99	79.737	ENSCAPG00000013803	SPEN	84	79.929	Cavia_aperea
ENSSSCG00000034484	SPEN	99	79.962	ENSCPOG00000014036	SPEN	85	80.154	Cavia_porcellus
ENSSSCG00000034484	SPEN	99	81.668	ENSCCAG00000020258	SPEN	92	85.720	Cebus_capucinus
ENSSSCG00000034484	SPEN	95	100.000	ENSCATG00000015079	SPEN	84	99.265	Cercocebus_atys
ENSSSCG00000034484	SPEN	99	82.451	ENSCLAG00000002018	SPEN	86	82.697	Chinchilla_lanigera
ENSSSCG00000034484	SPEN	99	87.910	ENSCSAG00000000841	SPEN	85	87.878	Chlorocebus_sabaeus
ENSSSCG00000034484	SPEN	98	71.777	ENSCPBG00000010477	SPEN	76	72.173	Chrysemys_picta_bellii
ENSSSCG00000034484	SPEN	99	85.883	ENSCANG00000034547	SPEN	85	85.946	Colobus_angolensis_palliatus
ENSSSCG00000034484	SPEN	99	80.230	ENSCGRG00001007725	Spen	85	80.326	Cricetulus_griseus_chok1gshd
ENSSSCG00000034484	SPEN	99	79.191	ENSCGRG00000010581	Spen	85	79.127	Cricetulus_griseus_crigri
ENSSSCG00000034484	SPEN	62	84.270	ENSCSEG00000003915	-	86	46.218	Cynoglossus_semilaevis
ENSSSCG00000034484	SPEN	95	45.689	ENSCVAG00000016346	-	86	46.148	Cyprinodon_variegatus
ENSSSCG00000034484	SPEN	77	46.406	ENSDARG00000074332	si:ch1073-335m2.2	72	46.249	Danio_rerio
ENSSSCG00000034484	SPEN	96	47.427	ENSDARG00000074245	spen	100	88.889	Danio_rerio
ENSSSCG00000034484	SPEN	99	86.838	ENSDNOG00000041948	SPEN	86	86.838	Dasypus_novemcinctus
ENSSSCG00000034484	SPEN	99	78.537	ENSDORG00000023909	Spen	85	78.805	Dipodomys_ordii
ENSSSCG00000034484	SPEN	60	97.479	ENSETEG00000016692	-	53	97.490	Echinops_telfairi
ENSSSCG00000034484	SPEN	95	100.000	ENSEASG00005015911	SPEN	85	100.000	Equus_asinus_asinus
ENSSSCG00000034484	SPEN	95	100.000	ENSECAG00000008833	SPEN	85	100.000	Equus_caballus
ENSSSCG00000034484	SPEN	78	82.007	ENSEEUG00000010255	SPEN	70	82.114	Erinaceus_europaeus
ENSSSCG00000034484	SPEN	71	57.766	ENSELUG00000007726	si:ch1073-335m2.2	69	57.804	Esox_lucius
ENSSSCG00000034484	SPEN	72	67.402	ENSFALG00000003551	SPEN	73	67.445	Ficedula_albicollis
ENSSSCG00000034484	SPEN	99	81.623	ENSFDAG00000010212	SPEN	85	82.013	Fukomys_damarensis
ENSSSCG00000034484	SPEN	62	50.880	ENSFHEG00000004544	si:ch1073-335m2.2	87	41.739	Fundulus_heteroclitus
ENSSSCG00000034484	SPEN	83	47.108	ENSGMOG00000008397	-	85	43.269	Gadus_morhua
ENSSSCG00000034484	SPEN	87	45.977	ENSGMOG00000008156	si:ch1073-335m2.2	80	45.489	Gadus_morhua
ENSSSCG00000034484	SPEN	84	48.470	ENSGAFG00000015819	-	91	74.157	Gambusia_affinis
ENSSSCG00000034484	SPEN	74	47.335	ENSGAFG00000021570	si:ch1073-335m2.2	78	44.266	Gambusia_affinis
ENSSSCG00000034484	SPEN	79	61.281	ENSGACG00000001176	si:ch1073-335m2.2	73	60.887	Gasterosteus_aculeatus
ENSSSCG00000034484	SPEN	95	46.522	ENSGACG00000005341	-	85	46.679	Gasterosteus_aculeatus
ENSSSCG00000034484	SPEN	98	97.456	ENSGAGG00000020785	SPEN	75	97.456	Gopherus_agassizii
ENSSSCG00000034484	SPEN	99	87.945	ENSGGOG00000012041	SPEN	85	88.009	Gorilla_gorilla
ENSSSCG00000034484	SPEN	84	81.461	ENSHBUG00000020626	-	77	48.492	Haplochromis_burtoni
ENSSSCG00000034484	SPEN	52	66.784	ENSHBUG00000023253	si:ch1073-335m2.2	57	59.467	Haplochromis_burtoni
ENSSSCG00000034484	SPEN	99	81.441	ENSHGLG00000019259	SPEN	85	81.395	Heterocephalus_glaber_female
ENSSSCG00000034484	SPEN	86	86.075	ENSHGLG00100019294	SPEN	78	86.075	Heterocephalus_glaber_male
ENSSSCG00000034484	SPEN	80	43.511	ENSHCOG00000006004	si:ch1073-335m2.2	77	43.341	Hippocampus_comes
ENSSSCG00000034484	SPEN	77	41.171	ENSIPUG00000018212	si:ch1073-335m2.2	73	40.978	Ictalurus_punctatus
ENSSSCG00000034484	SPEN	95	82.778	ENSIPUG00000021668	spen	84	81.967	Ictalurus_punctatus
ENSSSCG00000034484	SPEN	99	86.570	ENSSTOG00000021428	SPEN	85	87.353	Ictidomys_tridecemlineatus
ENSSSCG00000034484	SPEN	99	82.683	ENSJJAG00000010882	Spen	85	82.905	Jaculus_jaculus
ENSSSCG00000034484	SPEN	85	80.899	ENSKMAG00000003882	-	86	45.297	Kryptolebias_marmoratus
ENSSSCG00000034484	SPEN	79	57.977	ENSKMAG00000021725	si:ch1073-335m2.2	75	57.461	Kryptolebias_marmoratus
ENSSSCG00000034484	SPEN	76	59.625	ENSLBEG00000020855	si:ch1073-335m2.2	73	59.289	Labrus_bergylta
ENSSSCG00000034484	SPEN	79	40.160	ENSLBEG00000019129	-	83	39.362	Labrus_bergylta
ENSSSCG00000034484	SPEN	97	63.606	ENSLACG00000003258	SPEN	85	63.790	Latimeria_chalumnae
ENSSSCG00000034484	SPEN	99	53.134	ENSLOCG00000007896	si:ch1073-335m2.2	85	53.359	Lepisosteus_oculatus
ENSSSCG00000034484	SPEN	99	87.704	ENSLAFG00000004524	SPEN	86	87.895	Loxodonta_africana
ENSSSCG00000034484	SPEN	99	87.850	ENSMFAG00000041974	SPEN	85	87.913	Macaca_fascicularis
ENSSSCG00000034484	SPEN	99	87.818	ENSMMUG00000008026	SPEN	85	87.882	Macaca_mulatta
ENSSSCG00000034484	SPEN	99	87.945	ENSMNEG00000042402	SPEN	85	88.009	Macaca_nemestrina
ENSSSCG00000034484	SPEN	99	87.309	ENSMLEG00000039293	SPEN	85	87.873	Mandrillus_leucophaeus
ENSSSCG00000034484	SPEN	90	60.562	ENSMAMG00000023870	si:ch1073-335m2.2	84	60.019	Mastacembelus_armatus
ENSSSCG00000034484	SPEN	74	45.895	ENSMZEG00005021491	-	73	45.835	Maylandia_zebra
ENSSSCG00000034484	SPEN	62	52.644	ENSMZEG00005011762	si:ch1073-335m2.2	77	44.924	Maylandia_zebra
ENSSSCG00000034484	SPEN	99	77.989	ENSMAUG00000008318	Spen	85	78.148	Mesocricetus_auratus
ENSSSCG00000034484	SPEN	99	87.711	ENSMICG00000030994	SPEN	86	87.711	Microcebus_murinus
ENSSSCG00000034484	SPEN	99	80.299	ENSMOCG00000016083	Spen	85	80.713	Microtus_ochrogaster
ENSSSCG00000034484	SPEN	51	79.070	ENSMMOG00000021742	si:ch1073-335m2.2	50	79.070	Mola_mola
ENSSSCG00000034484	SPEN	96	82.022	ENSMALG00000008625	-	86	46.002	Monopterus_albus
ENSSSCG00000034484	SPEN	99	79.655	MGP_CAROLIEiJ_G0026745	Spen	85	79.879	Mus_caroli
ENSSSCG00000034484	SPEN	99	79.088	ENSMUSG00000040761	Spen	85	79.439	Mus_musculus
ENSSSCG00000034484	SPEN	99	79.094	MGP_PahariEiJ_G0029076	Spen	85	79.413	Mus_pahari
ENSSSCG00000034484	SPEN	99	79.420	MGP_SPRETEiJ_G0027724	Spen	85	79.675	Mus_spretus
ENSSSCG00000034484	SPEN	98	88.975	ENSMPUG00000016317	SPEN	85	89.098	Mustela_putorius_furo
ENSSSCG00000034484	SPEN	99	88.687	ENSMLUG00000010144	SPEN	98	96.947	Myotis_lucifugus
ENSSSCG00000034484	SPEN	99	77.841	ENSNGAG00000000641	Spen	79	85.270	Nannospalax_galili
ENSSSCG00000034484	SPEN	68	42.523	ENSNBRG00000022090	-	83	39.854	Neolamprologus_brichardi
ENSSSCG00000034484	SPEN	52	66.549	ENSNBRG00000005733	si:ch1073-335m2.2	53	58.974	Neolamprologus_brichardi
ENSSSCG00000034484	SPEN	99	87.817	ENSNLEG00000007652	SPEN	85	87.881	Nomascus_leucogenys
ENSSSCG00000034484	SPEN	92	75.421	ENSMEUG00000002422	SPEN	82	75.421	Notamacropus_eugenii
ENSSSCG00000034484	SPEN	92	89.614	ENSOPRG00000015800	SPEN	78	89.614	Ochotona_princeps
ENSSSCG00000034484	SPEN	99	81.619	ENSOCUG00000010840	SPEN	85	82.306	Oryctolagus_cuniculus
ENSSSCG00000034484	SPEN	75	40.954	ENSORLG00000028894	-	86	38.262	Oryzias_latipes
ENSSSCG00000034484	SPEN	71	41.397	ENSORLG00020007735	-	85	38.570	Oryzias_latipes_hni
ENSSSCG00000034484	SPEN	57	65.006	ENSORLG00015005537	si:ch1073-335m2.2	77	57.114	Oryzias_latipes_hsok
ENSSSCG00000034484	SPEN	96	43.645	ENSORLG00015022085	-	86	43.781	Oryzias_latipes_hsok
ENSSSCG00000034484	SPEN	62	54.459	ENSOMEG00000007639	-	55	54.756	Oryzias_melastigma
ENSSSCG00000034484	SPEN	74	65.572	ENSOMEG00000004509	si:ch1073-335m2.2	77	59.234	Oryzias_melastigma
ENSSSCG00000034484	SPEN	99	87.532	ENSOGAG00000025110	SPEN	85	87.532	Otolemur_garnettii
ENSSSCG00000034484	SPEN	99	90.813	ENSOARG00000008477	SPEN	86	90.813	Ovis_aries
ENSSSCG00000034484	SPEN	99	87.901	ENSPPAG00000035690	SPEN	85	87.965	Pan_paniscus
ENSSSCG00000034484	SPEN	99	87.977	ENSPTRG00000000210	SPEN	85	88.041	Pan_troglodytes
ENSSSCG00000034484	SPEN	99	86.741	ENSPANG00000006293	SPEN	85	86.804	Papio_anubis
ENSSSCG00000034484	SPEN	84	52.418	ENSPKIG00000002617	SPEN	91	81.111	Paramormyrops_kingsleyae
ENSSSCG00000034484	SPEN	93	100.000	ENSPKIG00000010492	si:ch1073-335m2.2	84	100.000	Paramormyrops_kingsleyae
ENSSSCG00000034484	SPEN	84	69.356	ENSPSIG00000008026	SPEN	85	69.356	Pelodiscus_sinensis
ENSSSCG00000034484	SPEN	99	80.882	ENSPEMG00000022997	Spen	85	81.011	Peromyscus_maniculatus_bairdii
ENSSSCG00000034484	SPEN	77	58.342	ENSPFOG00000017986	si:ch1073-335m2.2	78	44.637	Poecilia_formosa
ENSSSCG00000034484	SPEN	70	58.858	ENSPLAG00000016625	si:ch1073-335m2.2	74	58.465	Poecilia_latipinna
ENSSSCG00000034484	SPEN	96	45.227	ENSPMEG00000006764	-	91	73.783	Poecilia_mexicana
ENSSSCG00000034484	SPEN	57	59.350	ENSPMEG00000002674	si:ch1073-335m2.2	78	44.702	Poecilia_mexicana
ENSSSCG00000034484	SPEN	84	48.555	ENSPREG00000010399	-	91	74.157	Poecilia_reticulata
ENSSSCG00000034484	SPEN	78	59.154	ENSPREG00000005357	si:ch1073-335m2.2	74	57.719	Poecilia_reticulata
ENSSSCG00000034484	SPEN	99	88.295	ENSPPYG00000001834	SPEN	85	88.359	Pongo_abelii
ENSSSCG00000034484	SPEN	94	85.195	ENSPCAG00000009543	SPEN	83	85.330	Procavia_capensis
ENSSSCG00000034484	SPEN	99	87.055	ENSPCOG00000021735	SPEN	86	87.055	Propithecus_coquereli
ENSSSCG00000034484	SPEN	81	95.319	ENSPVAG00000013794	SPEN	70	95.347	Pteropus_vampyrus
ENSSSCG00000034484	SPEN	84	81.461	ENSPNYG00000012379	-	77	49.156	Pundamilia_nyererei
ENSSSCG00000034484	SPEN	52	66.667	ENSPNYG00000009042	si:ch1073-335m2.2	76	44.275	Pundamilia_nyererei
ENSSSCG00000034484	SPEN	82	46.493	ENSPNAG00000011452	si:ch1073-335m2.2	76	46.264	Pygocentrus_nattereri
ENSSSCG00000034484	SPEN	95	84.181	ENSPNAG00000020795	spen	86	78.195	Pygocentrus_nattereri
ENSSSCG00000034484	SPEN	99	79.652	ENSRNOG00000033556	Spen	85	79.729	Rattus_norvegicus
ENSSSCG00000034484	SPEN	99	87.805	ENSRBIG00000039654	SPEN	96	87.711	Rhinopithecus_bieti
ENSSSCG00000034484	SPEN	99	87.752	ENSRROG00000035686	SPEN	85	87.817	Rhinopithecus_roxellana
ENSSSCG00000034484	SPEN	99	87.131	ENSSBOG00000028770	SPEN	87	87.388	Saimiri_boliviensis_boliviensis
ENSSSCG00000034484	SPEN	97	71.156	ENSSHAG00000004960	SPEN	99	93.561	Sarcophilus_harrisii
ENSSSCG00000034484	SPEN	83	65.741	ENSSFOG00015007131	si:ch1073-335m2.2	82	65.741	Scleropages_formosus
ENSSSCG00000034484	SPEN	87	53.169	ENSSFOG00015010267	si:ch1073-335m2.2	87	50.546	Scleropages_formosus
ENSSSCG00000034484	SPEN	84	82.022	ENSSMAG00000008996	-	76	48.816	Scophthalmus_maximus
ENSSSCG00000034484	SPEN	83	45.165	ENSSMAG00000000125	si:ch1073-335m2.2	77	44.899	Scophthalmus_maximus
ENSSSCG00000034484	SPEN	81	58.264	ENSSDUG00000008416	si:ch1073-335m2.2	76	56.764	Seriola_dumerili
ENSSSCG00000034484	SPEN	81	58.172	ENSSLDG00000023347	si:ch1073-335m2.2	76	57.657	Seriola_lalandi_dorsalis
ENSSSCG00000034484	SPEN	84	82.584	ENSSLDG00000012950	-	91	75.836	Seriola_lalandi_dorsalis
ENSSSCG00000034484	SPEN	85	96.296	ENSSPUG00000001866	-	72	66.073	Sphenodon_punctatus
ENSSSCG00000034484	SPEN	87	67.251	ENSSPAG00000012454	si:ch1073-335m2.2	84	60.000	Stegastes_partitus
ENSSSCG00000034484	SPEN	84	81.461	ENSSPAG00000006014	-	91	74.906	Stegastes_partitus
ENSSSCG00000034484	SPEN	64	55.927	ENSTRUG00000021008	si:ch1073-335m2.2	50	37.888	Takifugu_rubripes
ENSSSCG00000034484	SPEN	96	44.468	ENSTRUG00000024350	-	86	45.314	Takifugu_rubripes
ENSSSCG00000034484	SPEN	85	77.559	ENSTNIG00000010907	-	84	77.805	Tetraodon_nigroviridis
ENSSSCG00000034484	SPEN	82	90.110	ENSTBEG00000003628	SPEN	70	90.110	Tupaia_belangeri
ENSSSCG00000034484	SPEN	82	96.498	ENSTTRG00000015704	SPEN	71	96.498	Tursiops_truncatus
ENSSSCG00000034484	SPEN	99	90.175	ENSUAMG00000009600	SPEN	85	90.423	Ursus_americanus
ENSSSCG00000034484	SPEN	99	89.443	ENSUMAG00000021641	SPEN	86	89.182	Ursus_maritimus
ENSSSCG00000034484	SPEN	95	100.000	ENSVVUG00000028951	SPEN	85	100.000	Vulpes_vulpes
ENSSSCG00000034484	SPEN	96	57.808	ENSXETG00000023114	SPEN	85	57.808	Xenopus_tropicalis
ENSSSCG00000034484	SPEN	69	51.524	ENSXCOG00000004516	si:ch1073-335m2.2	66	50.737	Xiphophorus_couchianus
ENSSSCG00000034484	SPEN	84	47.729	ENSXMAG00000021384	-	90	72.453	Xiphophorus_maculatus
ENSSSCG00000034484	SPEN	72	46.920	ENSXMAG00000029887	si:ch1073-335m2.2	69	47.417	Xiphophorus_maculatus