EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000034697 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 43754 bases
Position: chr6:75414932-75458685
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000037239	RVT_1	PF00078.27	8.5e-15	1	1
ENSSSCP00000042233	RVT_1	PF00078.27	8.5e-15	1	1
ENSSSCP00000037239	RNase_H	PF00075.24	1.9e-19	1	1
ENSSSCP00000042233	RNase_H	PF00075.24	1.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000049025	-	7592	-	ENSSSCP00000037239	1267 (aa)	-	A0A287A0G8
ENSSSCT00000044870	-	6137	-	ENSSSCP00000042233	1267 (aa)	-	A0A287A0G8

Gene Model

Click here to download ENSSSCG00000034697's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000034697's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000034697	-	56	42.779	ENSSSCG00000034853	-	63	42.779

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000034697	-	50	35.538	ENSAPEG00000000438	-	70	35.538	Amphiprion_percula
ENSSSCG00000034697	-	50	32.403	ENSACLG00000023027	-	52	32.774	Astatotilapia_calliptera
ENSSSCG00000034697	-	50	31.269	ENSAMXG00000033455	-	54	31.571	Astyanax_mexicanus
ENSSSCG00000034697	-	50	36.735	ENSAMXG00000040526	-	53	37.037	Astyanax_mexicanus
ENSSSCG00000034697	-	57	40.928	ENSBTAG00000052165	-	70	40.928	Bos_taurus
ENSSSCG00000034697	-	50	31.790	ENSCSEG00000009059	-	52	31.459	Cynoglossus_semilaevis
ENSSSCG00000034697	-	50	31.790	ENSCSEG00000013867	-	52	31.459	Cynoglossus_semilaevis
ENSSSCG00000034697	-	50	31.790	ENSCSEG00000018136	-	52	31.459	Cynoglossus_semilaevis
ENSSSCG00000034697	-	50	31.790	ENSCSEG00000011566	-	52	31.459	Cynoglossus_semilaevis
ENSSSCG00000034697	-	50	31.790	ENSCSEG00000012922	-	52	31.459	Cynoglossus_semilaevis
ENSSSCG00000034697	-	51	48.062	ENSECAG00000034459	-	59	47.826	Equus_caballus
ENSSSCG00000034697	-	50	45.171	ENSGALG00000053504	-	69	45.171	Gallus_gallus
ENSSSCG00000034697	-	50	47.508	ENSGALG00000050905	-	69	47.508	Gallus_gallus
ENSSSCG00000034697	-	51	40.634	ENSMODG00000027661	-	56	40.634	Monodelphis_domestica
ENSSSCG00000034697	-	58	36.898	ENSMODG00000028504	-	81	36.898	Monodelphis_domestica
ENSSSCG00000034697	-	54	36.947	ENSMODG00000029316	-	85	37.271	Monodelphis_domestica
ENSSSCG00000034697	-	56	36.602	ENSMODG00000028573	-	65	36.921	Monodelphis_domestica
ENSSSCG00000034697	-	57	36.289	ENSMODG00000027428	-	60	36.608	Monodelphis_domestica
ENSSSCG00000034697	-	51	40.483	ENSMODG00000029647	-	82	40.483	Monodelphis_domestica
ENSSSCG00000034697	-	54	36.805	ENSMODG00000029740	-	64	37.131	Monodelphis_domestica
ENSSSCG00000034697	-	54	37.090	ENSMODG00000029722	-	64	37.412	Monodelphis_domestica
ENSSSCG00000034697	-	56	36.602	ENSMODG00000027641	-	65	36.921	Monodelphis_domestica
ENSSSCG00000034697	-	56	36.602	ENSMODG00000029698	-	65	36.921	Monodelphis_domestica
ENSSSCG00000034697	-	56	36.828	ENSMODG00000027448	-	91	37.143	Monodelphis_domestica
ENSSSCG00000034697	-	57	36.785	ENSMODG00000028686	-	99	36.785	Monodelphis_domestica
ENSSSCG00000034697	-	56	36.690	ENSMODG00000028385	-	65	37.007	Monodelphis_domestica
ENSSSCG00000034697	-	55	39.860	ENSOARG00000015221	-	85	39.860	Ovis_aries
ENSSSCG00000034697	-	55	40.000	ENSOARG00000014856	-	77	40.000	Ovis_aries
ENSSSCG00000034697	-	55	40.000	ENSOARG00000009849	-	76	40.000	Ovis_aries
ENSSSCG00000034697	-	53	42.688	ENSPSIG00000001866	-	63	42.270	Pelodiscus_sinensis