EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000034769 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 1940 bases
Position: chr1:113156352-113158291
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000036103	Ribosomal_S17	PF00366.20	1.9e-15	1	1
ENSSSCP00000054774	Ribosomal_S17	PF00366.20	2.7e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000045965	-	417	-	ENSSSCP00000054774	138 (aa)	-	A0A287BE03
ENSSSCT00000060091	-	360	-	ENSSSCP00000036103	119 (aa)	-	A0A286ZWV3

Gene Model

Click here to download ENSSSCG00000034769's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000034769's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000034769	-	91	85.385	ENSSSCG00000007749	-	100	85.385

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000034769	-	91	79.231	ENSG00000239789	MRPS17	100	79.231	Homo_sapiens
ENSSSCG00000034769	-	87	73.148	ENSAPOG00000000295	mrps17	81	66.667	Acanthochromis_polyacanthus
ENSSSCG00000034769	-	91	81.538	ENSAMEG00000016161	-	95	81.538	Ailuropoda_melanoleuca
ENSSSCG00000034769	-	82	76.923	ENSACIG00000019454	mrps17	93	68.992	Amphilophus_citrinellus
ENSSSCG00000034769	-	87	73.148	ENSAOCG00000015138	mrps17	90	65.909	Amphiprion_ocellaris
ENSSSCG00000034769	-	87	73.148	ENSAPEG00000017481	mrps17	90	66.667	Amphiprion_percula
ENSSSCG00000034769	-	87	73.148	ENSATEG00000007899	mrps17	90	67.442	Anabas_testudineus
ENSSSCG00000034769	-	89	73.874	ENSAPLG00000010523	-	95	66.154	Anas_platyrhynchos
ENSSSCG00000034769	-	91	66.923	ENSANAG00000025061	-	100	66.923	Aotus_nancymaae
ENSSSCG00000034769	-	62	76.667	ENSANAG00000030302	-	80	76.667	Aotus_nancymaae
ENSSSCG00000034769	-	94	63.393	ENSANAG00000023853	-	100	64.000	Aotus_nancymaae
ENSSSCG00000034769	-	86	72.897	ENSACLG00000007174	mrps17	90	65.152	Astatotilapia_calliptera
ENSSSCG00000034769	-	86	71.963	ENSAMXG00000030410	mrps17	94	64.662	Astyanax_mexicanus
ENSSSCG00000034769	-	97	78.333	ENSBTAG00000023186	-	100	80.000	Bos_taurus
ENSSSCG00000034769	-	97	79.167	ENSBTAG00000007934	MRPS17	100	80.769	Bos_taurus
ENSSSCG00000034769	-	91	78.462	ENSCJAG00000021291	-	100	78.462	Callithrix_jacchus
ENSSSCG00000034769	-	91	73.077	ENSCJAG00000022879	-	100	73.077	Callithrix_jacchus
ENSSSCG00000034769	-	91	77.692	ENSCJAG00000022938	-	100	77.692	Callithrix_jacchus
ENSSSCG00000034769	-	91	83.846	ENSCAFG00000010098	-	92	83.846	Canis_familiaris
ENSSSCG00000034769	-	91	83.846	ENSCAFG00020004866	-	100	83.846	Canis_lupus_dingo
ENSSSCG00000034769	-	91	80.769	ENSCHIG00000014572	-	100	80.769	Capra_hircus
ENSSSCG00000034769	-	91	80.769	ENSTSYG00000001260	-	100	80.769	Carlito_syrichta
ENSSSCG00000034769	-	87	84.404	ENSCAPG00000006241	-	100	79.032	Cavia_aperea
ENSSSCG00000034769	-	91	76.923	ENSCCAG00000025426	-	100	76.923	Cebus_capucinus
ENSSSCG00000034769	-	91	63.846	ENSCCAG00000037194	-	100	63.846	Cebus_capucinus
ENSSSCG00000034769	-	70	84.270	ENSCATG00000039682	-	100	79.091	Cercocebus_atys
ENSSSCG00000034769	-	91	68.800	ENSCATG00000030575	-	100	68.800	Cercocebus_atys
ENSSSCG00000034769	-	83	85.577	ENSCLAG00000007650	-	96	80.800	Chinchilla_lanigera
ENSSSCG00000034769	-	91	77.692	ENSCSAG00000016120	-	100	77.692	Chlorocebus_sabaeus
ENSSSCG00000034769	-	91	68.462	ENSCSAG00000019470	-	100	68.462	Chlorocebus_sabaeus
ENSSSCG00000034769	-	61	79.221	ENSCHOG00000013255	-	100	78.652	Choloepus_hoffmanni
ENSSSCG00000034769	-	95	80.508	ENSCHOG00000010576	-	100	80.000	Choloepus_hoffmanni
ENSSSCG00000034769	-	88	74.545	ENSCHOG00000004436	-	50	71.795	Choloepus_hoffmanni
ENSSSCG00000034769	-	89	72.973	ENSCPBG00000014888	-	95	66.923	Chrysemys_picta_bellii
ENSSSCG00000034769	-	96	62.406	ENSCANG00000035780	-	100	62.406	Colobus_angolensis_palliatus
ENSSSCG00000034769	-	91	72.000	ENSCANG00000035889	-	100	72.000	Colobus_angolensis_palliatus
ENSSSCG00000034769	-	91	78.462	ENSCANG00000030538	-	100	78.462	Colobus_angolensis_palliatus
ENSSSCG00000034769	-	87	81.651	ENSCGRG00001012873	Mrps17	99	77.344	Cricetulus_griseus_chok1gshd
ENSSSCG00000034769	-	86	73.832	ENSCSEG00000018563	mrps17	91	63.158	Cynoglossus_semilaevis
ENSSSCG00000034769	-	80	78.000	ENSCVAG00000006034	mrps17	86	69.600	Cyprinodon_variegatus
ENSSSCG00000034769	-	80	79.000	ENSDARG00000054164	mrps17	92	69.048	Danio_rerio
ENSSSCG00000034769	-	87	82.569	ENSDNOG00000014785	-	92	76.923	Dasypus_novemcinctus
ENSSSCG00000034769	-	86	30.645	FBgn0034986	mRpS17	79	30.645	Drosophila_melanogaster
ENSSSCG00000034769	-	85	57.547	ENSEBUG00000010858	mrps17	63	57.547	Eptatretus_burgeri
ENSSSCG00000034769	-	87	86.239	ENSEASG00005008885	-	100	85.246	Equus_asinus_asinus
ENSSSCG00000034769	-	87	86.239	ENSECAG00000012583	-	100	85.246	Equus_caballus
ENSSSCG00000034769	-	83	74.038	ENSECAG00000028191	-	94	73.913	Equus_caballus
ENSSSCG00000034769	-	86	76.636	ENSELUG00000006708	mrps17	89	67.647	Esox_lucius
ENSSSCG00000034769	-	91	82.308	ENSFCAG00000041039	-	100	82.308	Felis_catus
ENSSSCG00000034769	-	89	72.973	ENSFALG00000006796	-	90	66.165	Ficedula_albicollis
ENSSSCG00000034769	-	91	78.462	ENSFDAG00000001915	-	100	78.462	Fukomys_damarensis
ENSSSCG00000034769	-	80	76.000	ENSFHEG00000023082	mrps17	85	67.480	Fundulus_heteroclitus
ENSSSCG00000034769	-	80	73.000	ENSGMOG00000007056	mrps17	74	73.000	Gadus_morhua
ENSSSCG00000034769	-	89	73.874	ENSGALG00000002379	MRPS17	100	64.234	Gallus_gallus
ENSSSCG00000034769	-	80	78.000	ENSGAFG00000001727	mrps17	85	68.548	Gambusia_affinis
ENSSSCG00000034769	-	80	74.000	ENSGACG00000020492	mrps17	90	65.079	Gasterosteus_aculeatus
ENSSSCG00000034769	-	89	73.874	ENSGAGG00000022429	-	95	68.217	Gopherus_agassizii
ENSSSCG00000034769	-	91	72.000	ENSGGOG00000044141	-	100	72.000	Gorilla_gorilla
ENSSSCG00000034769	-	91	78.462	ENSGGOG00000039358	-	100	78.462	Gorilla_gorilla
ENSSSCG00000034769	-	86	72.897	ENSHBUG00000006127	mrps17	90	65.152	Haplochromis_burtoni
ENSSSCG00000034769	-	91	65.649	ENSHGLG00000010593	-	100	65.649	Heterocephalus_glaber_female
ENSSSCG00000034769	-	91	65.649	ENSHGLG00100012532	-	100	65.649	Heterocephalus_glaber_male
ENSSSCG00000034769	-	91	79.231	ENSHGLG00100010825	-	100	79.231	Heterocephalus_glaber_male
ENSSSCG00000034769	-	84	68.571	ENSHCOG00000009491	mrps17	95	58.333	Hippocampus_comes
ENSSSCG00000034769	-	86	71.963	ENSIPUG00000007844	MRPS17	94	65.152	Ictalurus_punctatus
ENSSSCG00000034769	-	96	68.421	ENSJJAG00000022596	-	90	70.909	Jaculus_jaculus
ENSSSCG00000034769	-	86	75.701	ENSKMAG00000006452	mrps17	90	68.182	Kryptolebias_marmoratus
ENSSSCG00000034769	-	80	76.000	ENSLBEG00000000120	mrps17	86	67.460	Labrus_bergylta
ENSSSCG00000034769	-	86	72.897	ENSLACG00000018908	mrps17	97	62.319	Latimeria_chalumnae
ENSSSCG00000034769	-	80	74.000	ENSLOCG00000004118	mrps17	92	64.394	Lepisosteus_oculatus
ENSSSCG00000034769	-	89	81.982	ENSLAFG00000027907	-	100	79.167	Loxodonta_africana
ENSSSCG00000034769	-	91	78.462	ENSMFAG00000038594	-	100	78.462	Macaca_fascicularis
ENSSSCG00000034769	-	96	68.116	ENSMMUG00000041709	-	100	68.116	Macaca_mulatta
ENSSSCG00000034769	-	100	68.531	ENSMMUG00000000585	-	83	68.531	Macaca_mulatta
ENSSSCG00000034769	-	91	78.462	ENSMNEG00000035442	-	100	78.462	Macaca_nemestrina
ENSSSCG00000034769	-	91	78.462	ENSMLEG00000040782	-	100	78.462	Mandrillus_leucophaeus
ENSSSCG00000034769	-	93	70.677	ENSMLEG00000011393	-	99	70.677	Mandrillus_leucophaeus
ENSSSCG00000034769	-	82	76.471	ENSMAMG00000020981	mrps17	86	67.717	Mastacembelus_armatus
ENSSSCG00000034769	-	86	72.897	ENSMZEG00005024876	mrps17	90	65.152	Maylandia_zebra
ENSSSCG00000034769	-	89	73.874	ENSMGAG00000004317	-	95	66.923	Meleagris_gallopavo
ENSSSCG00000034769	-	87	81.651	ENSMAUG00000021017	Mrps17	99	77.344	Mesocricetus_auratus
ENSSSCG00000034769	-	91	82.308	ENSMICG00000046806	-	100	82.308	Microcebus_murinus
ENSSSCG00000034769	-	95	72.034	ENSMOCG00000017721	-	87	72.034	Microtus_ochrogaster
ENSSSCG00000034769	-	89	79.279	ENSMOCG00000008471	-	94	76.033	Microtus_ochrogaster
ENSSSCG00000034769	-	80	76.000	ENSMMOG00000012804	mrps17	89	67.717	Mola_mola
ENSSSCG00000034769	-	88	76.364	ENSMODG00000006523	-	99	71.094	Monodelphis_domestica
ENSSSCG00000034769	-	80	78.000	ENSMALG00000018057	mrps17	86	68.800	Monopterus_albus
ENSSSCG00000034769	-	87	81.651	MGP_CAROLIEiJ_G0027784	Mrps17	100	82.759	Mus_caroli
ENSSSCG00000034769	-	87	81.651	ENSMUSG00000034211	Mrps17	100	82.759	Mus_musculus
ENSSSCG00000034769	-	87	81.651	MGP_PahariEiJ_G0024399	Mrps17	100	82.759	Mus_pahari
ENSSSCG00000034769	-	87	81.651	MGP_SPRETEiJ_G0028783	Mrps17	100	82.759	Mus_spretus
ENSSSCG00000034769	-	91	83.846	ENSMPUG00000016230	-	70	83.846	Mustela_putorius_furo
ENSSSCG00000034769	-	87	84.404	ENSMLUG00000016710	-	100	80.000	Myotis_lucifugus
ENSSSCG00000034769	-	87	81.651	ENSNGAG00000020609	Mrps17	98	77.344	Nannospalax_galili
ENSSSCG00000034769	-	86	71.963	ENSNBRG00000002238	mrps17	90	64.394	Neolamprologus_brichardi
ENSSSCG00000034769	-	91	78.462	ENSNLEG00000032290	-	100	78.462	Nomascus_leucogenys
ENSSSCG00000034769	-	87	77.982	ENSMEUG00000005143	-	95	72.951	Notamacropus_eugenii
ENSSSCG00000034769	-	87	82.569	ENSOPRG00000009945	-	100	76.562	Ochotona_princeps
ENSSSCG00000034769	-	87	65.833	ENSODEG00000006408	-	95	65.833	Octodon_degus
ENSSSCG00000034769	-	79	76.768	ENSODEG00000014911	-	99	73.874	Octodon_degus
ENSSSCG00000034769	-	83	85.859	ENSODEG00000017232	-	96	80.833	Octodon_degus
ENSSSCG00000034769	-	75	88.764	ENSODEG00000015145	-	100	85.567	Octodon_degus
ENSSSCG00000034769	-	87	76.800	ENSODEG00000018639	-	96	76.800	Octodon_degus
ENSSSCG00000034769	-	87	65.000	ENSODEG00000004346	-	96	65.000	Octodon_degus
ENSSSCG00000034769	-	86	71.963	ENSONIG00000008746	mrps17	90	65.152	Oreochromis_niloticus
ENSSSCG00000034769	-	97	78.333	ENSOCUG00000024077	-	100	80.769	Oryctolagus_cuniculus
ENSSSCG00000034769	-	97	78.333	ENSOCUG00000001767	-	95	80.769	Oryctolagus_cuniculus
ENSSSCG00000034769	-	97	78.333	ENSOCUG00000027419	-	100	80.769	Oryctolagus_cuniculus
ENSSSCG00000034769	-	86	73.832	ENSORLG00000002795	mrps17	92	64.925	Oryzias_latipes
ENSSSCG00000034769	-	86	73.832	ENSORLG00020016792	mrps17	92	64.925	Oryzias_latipes_hni
ENSSSCG00000034769	-	86	73.832	ENSORLG00015001149	mrps17	92	64.925	Oryzias_latipes_hsok
ENSSSCG00000034769	-	87	74.312	ENSOMEG00000009095	mrps17	92	66.667	Oryzias_melastigma
ENSSSCG00000034769	-	91	74.615	ENSOGAG00000009088	-	100	74.615	Otolemur_garnettii
ENSSSCG00000034769	-	91	81.538	ENSOGAG00000010486	-	100	81.538	Otolemur_garnettii
ENSSSCG00000034769	-	97	78.333	ENSOARG00000009925	-	88	80.000	Ovis_aries
ENSSSCG00000034769	-	91	78.462	ENSPPAG00000036712	-	100	78.462	Pan_paniscus
ENSSSCG00000034769	-	91	72.000	ENSPPAG00000038238	-	100	72.000	Pan_paniscus
ENSSSCG00000034769	-	91	82.308	ENSPPRG00000000525	-	100	82.308	Panthera_pardus
ENSSSCG00000034769	-	91	82.308	ENSPTIG00000019404	-	82	82.308	Panthera_tigris_altaica
ENSSSCG00000034769	-	91	72.800	ENSPTRG00000048604	-	100	72.800	Pan_troglodytes
ENSSSCG00000034769	-	91	78.462	ENSPTRG00000043904	-	100	78.462	Pan_troglodytes
ENSSSCG00000034769	-	91	78.462	ENSPTRG00000019203	MRPS17	100	78.462	Pan_troglodytes
ENSSSCG00000034769	-	96	72.993	ENSPTRG00000046133	-	99	72.993	Pan_troglodytes
ENSSSCG00000034769	-	86	75.610	ENSPTRG00000051838	-	95	75.610	Pan_troglodytes
ENSSSCG00000034769	-	91	78.462	ENSPANG00000015285	-	100	78.462	Papio_anubis
ENSSSCG00000034769	-	80	67.568	ENSPANG00000030519	-	100	67.568	Papio_anubis
ENSSSCG00000034769	-	86	69.159	ENSPKIG00000018389	mrps17	91	62.400	Paramormyrops_kingsleyae
ENSSSCG00000034769	-	89	73.874	ENSPSIG00000013261	-	95	67.692	Pelodiscus_sinensis
ENSSSCG00000034769	-	93	61.207	ENSPMAG00000006299	mrps17	74	61.207	Petromyzon_marinus
ENSSSCG00000034769	-	81	73.267	ENSPFOG00000010719	mrps17	88	64.062	Poecilia_formosa
ENSSSCG00000034769	-	81	73.267	ENSPLAG00000018054	mrps17	88	64.062	Poecilia_latipinna
ENSSSCG00000034769	-	81	73.267	ENSPMEG00000014029	mrps17	88	64.062	Poecilia_mexicana
ENSSSCG00000034769	-	81	72.277	ENSPREG00000009010	mrps17	90	63.281	Poecilia_reticulata
ENSSSCG00000034769	-	91	78.462	ENSPPYG00000017547	-	100	78.462	Pongo_abelii
ENSSSCG00000034769	-	82	73.786	ENSPCOG00000000608	-	92	73.786	Propithecus_coquereli
ENSSSCG00000034769	-	91	81.538	ENSPCOG00000013668	-	100	81.538	Propithecus_coquereli
ENSSSCG00000034769	-	88	85.455	ENSPVAG00000006305	-	99	82.308	Pteropus_vampyrus
ENSSSCG00000034769	-	86	72.897	ENSPNYG00000018693	mrps17	90	65.152	Pundamilia_nyererei
ENSSSCG00000034769	-	86	75.701	ENSPNAG00000015336	mrps17	76	71.429	Pygocentrus_nattereri
ENSSSCG00000034769	-	87	81.651	ENSRNOG00000000926	Mrps17	100	76.378	Rattus_norvegicus
ENSSSCG00000034769	-	87	74.312	ENSRNOG00000030847	AABR07012868.1	87	67.717	Rattus_norvegicus
ENSSSCG00000034769	-	87	82.569	ENSRBIG00000032287	-	99	78.906	Rhinopithecus_bieti
ENSSSCG00000034769	-	87	81.651	ENSRBIG00000032061	-	100	78.992	Rhinopithecus_bieti
ENSSSCG00000034769	-	91	79.231	ENSRROG00000000039	-	100	79.231	Rhinopithecus_roxellana
ENSSSCG00000034769	-	87	81.651	ENSRROG00000021955	-	99	78.125	Rhinopithecus_roxellana
ENSSSCG00000034769	-	91	76.923	ENSSBOG00000025889	-	100	76.923	Saimiri_boliviensis_boliviensis
ENSSSCG00000034769	-	91	60.800	ENSSBOG00000030322	-	100	60.800	Saimiri_boliviensis_boliviensis
ENSSSCG00000034769	-	89	72.973	ENSSBOG00000003355	-	95	72.581	Saimiri_boliviensis_boliviensis
ENSSSCG00000034769	-	90	77.679	ENSSHAG00000009749	-	95	74.590	Sarcophilus_harrisii
ENSSSCG00000034769	-	86	69.159	ENSSFOG00015006180	mrps17	85	64.228	Scleropages_formosus
ENSSSCG00000034769	-	93	65.854	ENSSMAG00000001680	mrps17	90	65.672	Scophthalmus_maximus
ENSSSCG00000034769	-	86	72.897	ENSSDUG00000017736	mrps17	92	65.441	Seriola_dumerili
ENSSSCG00000034769	-	86	72.897	ENSSLDG00000015517	mrps17	92	65.441	Seriola_lalandi_dorsalis
ENSSSCG00000034769	-	89	72.072	ENSSPUG00000002623	-	95	66.154	Sphenodon_punctatus
ENSSSCG00000034769	-	80	73.000	ENSSPAG00000008641	mrps17	85	65.323	Stegastes_partitus
ENSSSCG00000034769	-	89	73.874	ENSTGUG00000005052	MRPS17	95	66.923	Taeniopygia_guttata
ENSSSCG00000034769	-	93	67.480	ENSTRUG00000024068	mrps17	91	64.179	Takifugu_rubripes
ENSSSCG00000034769	-	93	71.552	ENSTNIG00000016121	mrps17	98	61.224	Tetraodon_nigroviridis
ENSSSCG00000034769	-	59	79.310	ENSTBEG00000007385	-	99	79.310	Tupaia_belangeri
ENSSSCG00000034769	-	91	83.846	ENSTTRG00000015139	-	100	83.846	Tursiops_truncatus
ENSSSCG00000034769	-	91	84.615	ENSUAMG00000002970	-	100	84.615	Ursus_americanus
ENSSSCG00000034769	-	91	83.846	ENSUMAG00000015822	-	100	83.846	Ursus_maritimus
ENSSSCG00000034769	-	91	84.615	ENSVVUG00000016664	-	100	84.615	Vulpes_vulpes
ENSSSCG00000034769	-	81	76.238	ENSXETG00000010088	mrps17	93	62.595	Xenopus_tropicalis
ENSSSCG00000034769	-	80	78.000	ENSXCOG00000009153	mrps17	81	76.190	Xiphophorus_couchianus
ENSSSCG00000034769	-	80	77.000	ENSXMAG00000007366	mrps17	86	67.460	Xiphophorus_maculatus