EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSSCG00000034815 (Gene tree)
Gene ID
102167536
Gene Symbol
U2AF2
Alias
U2AF65
Full Name
U2 small nuclear RNA auxiliary factor 2
Gene Type
protein_coding
Species
Sus_scrofa
Status
putative
Strand
Plus strand
Length
15553 bases
Position
chr6:59774190-59789742
Accession
102167536
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSSCP00000042718RRM_1PF00076.221.5e-3413
ENSSSCP00000042718RRM_1PF00076.221.5e-3423
ENSSSCP00000042718RRM_1PF00076.221.5e-3433
ENSSSCP00000057470RRM_1PF00076.221.8e-3413
ENSSSCP00000057470RRM_1PF00076.221.8e-3423
ENSSSCP00000057470RRM_1PF00076.221.8e-3433
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSSCT00000063346U2AF2-2012339-ENSSSCP00000042718456 (aa)-A0A287AFB9
ENSSSCT00000042120U2AF2-2021416XM_021093447ENSSSCP00000057470471 (aa)XP_020949106I3W8V7
Gene Model
Click here to download ENSSSCG00000034815's gene model file
Pathways
Pathway IDPathway NameSource
ssc03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000034815's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSSCG00000034815U2AF26337.255ENSSSCG00000038800PUF607233.913
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSSCG00000034815U2AF2100100.000ENSG00000063244U2AF2100100.000Homo_sapiens
ENSSSCG00000034815U2AF26789.783ENSAPOG00000023155u2af2a10089.783Acanthochromis_polyacanthus
ENSSSCG00000034815U2AF29975.957ENSAPOG00000002208-10073.718Acanthochromis_polyacanthus
ENSSSCG00000034815U2AF28798.301ENSAMEG00000003864U2AF210098.301Ailuropoda_melanoleuca
ENSSSCG00000034815U2AF28595.630ENSACIG00000005749u2af2a9493.548Amphilophus_citrinellus
ENSSSCG00000034815U2AF29674.946ENSACIG00000014173-8978.450Amphilophus_citrinellus
ENSSSCG00000034815U2AF29976.383ENSAOCG00000003595-10074.145Amphiprion_ocellaris
ENSSSCG00000034815U2AF29991.685ENSAOCG00000015571u2af2a10091.685Amphiprion_ocellaris
ENSSSCG00000034815U2AF28595.373ENSAPEG00000009376u2af2a9593.300Amphiprion_percula
ENSSSCG00000034815U2AF29676.275ENSAPEG00000020062-8680.198Amphiprion_percula
ENSSSCG00000034815U2AF210089.787ENSATEG00000022332u2af2a10089.407Anabas_testudineus
ENSSSCG00000034815U2AF29676.872ENSATEG00000020577-8880.693Anabas_testudineus
ENSSSCG00000034815U2AF210096.802ENSACAG00000015489U2AF210096.802Anolis_carolinensis
ENSSSCG00000034815U2AF210098.886ENSANAG00000028042U2AF210098.886Aotus_nancymaae
ENSSSCG00000034815U2AF29976.383ENSACLG00000020793-10074.145Astatotilapia_calliptera
ENSSSCG00000034815U2AF210090.213ENSACLG00000022181u2af2a10089.831Astatotilapia_calliptera
ENSSSCG00000034815U2AF29989.035ENSAMXG00000039454u2af2b9988.596Astyanax_mexicanus
ENSSSCG00000034815U2AF210086.170ENSAMXG00000033347u2af2a10086.809Astyanax_mexicanus
ENSSSCG00000034815U2AF210099.781ENSBTAG00000002830U2AF210099.781Bos_taurus
ENSSSCG00000034815U2AF29157.407WBGene00006697uaf-110056.081Caenorhabditis_elegans
ENSSSCG00000034815U2AF210099.158ENSCJAG00000017128U2AF210099.158Callithrix_jacchus
ENSSSCG00000034815U2AF2100100.000ENSCAFG00000002551U2AF2100100.000Canis_familiaris
ENSSSCG00000034815U2AF29795.032ENSCAFG00020015445U2AF29795.032Canis_lupus_dingo
ENSSSCG00000034815U2AF28783.582ENSCHIG00000023595U2AF28982.282Capra_hircus
ENSSSCG00000034815U2AF210099.158ENSTSYG00000007432U2AF210099.158Carlito_syrichta
ENSSSCG00000034815U2AF29699.127ENSCAPG00000008466U2AF210099.127Cavia_aperea
ENSSSCG00000034815U2AF210099.158ENSCPOG00000001582U2AF210099.158Cavia_porcellus
ENSSSCG00000034815U2AF210099.158ENSCCAG00000023336U2AF210099.158Cebus_capucinus
ENSSSCG00000034815U2AF2100100.000ENSCATG00000004637U2AF2100100.000Cercocebus_atys
ENSSSCG00000034815U2AF2100100.000ENSCLAG00000000596U2AF2100100.000Chinchilla_lanigera
ENSSSCG00000034815U2AF2100100.000ENSCSAG00000001722U2AF2100100.000Chlorocebus_sabaeus
ENSSSCG00000034815U2AF29696.404ENSCPBG00000004485U2AF210099.674Chrysemys_picta_bellii
ENSSSCG00000034815U2AF28570.694ENSCING00000003455-8070.918Ciona_intestinalis
ENSSSCG00000034815U2AF28569.845ENSCSAVG00000006813-8569.643Ciona_savignyi
ENSSSCG00000034815U2AF29199.766ENSCANG00000031002-9699.766Colobus_angolensis_palliatus
ENSSSCG00000034815U2AF210091.772ENSCANG00000043845-10092.194Colobus_angolensis_palliatus
ENSSSCG00000034815U2AF2100100.000ENSCGRG00001003185-100100.000Cricetulus_griseus_chok1gshd
ENSSSCG00000034815U2AF29988.511ENSCGRG00001007486-9988.085Cricetulus_griseus_chok1gshd
ENSSSCG00000034815U2AF25099.130ENSCGRG00000004524-7994.672Cricetulus_griseus_crigri
ENSSSCG00000034815U2AF29988.511ENSCGRG00000018587-9988.085Cricetulus_griseus_crigri
ENSSSCG00000034815U2AF27391.083ENSCSEG00000018709u2af2a8291.083Cynoglossus_semilaevis
ENSSSCG00000034815U2AF29974.304ENSCSEG00000020504-8878.894Cynoglossus_semilaevis
ENSSSCG00000034815U2AF29976.596ENSCVAG00000023307-10075.855Cyprinodon_variegatus
ENSSSCG00000034815U2AF210091.485ENSCVAG00000001259u2af2a10091.485Cyprinodon_variegatus
ENSSSCG00000034815U2AF210085.804ENSDARG00000011740u2af2b10085.595Danio_rerio
ENSSSCG00000034815U2AF210087.527ENSDARG00000012505u2af2a10088.602Danio_rerio
ENSSSCG00000034815U2AF29199.766ENSDNOG00000047039U2AF29699.766Dasypus_novemcinctus
ENSSSCG00000034815U2AF210099.158ENSDORG00000003250U2af210099.158Dipodomys_ordii
ENSSSCG00000034815U2AF28572.890FBgn0005411U2af5010072.776Drosophila_melanogaster
ENSSSCG00000034815U2AF28951.270FBgn0034834LS28553.904Drosophila_melanogaster
ENSSSCG00000034815U2AF29275.118ENSEBUG00000010917U2AF28976.543Eptatretus_burgeri
ENSSSCG00000034815U2AF29159.815ENSEBUG00000001732U2AF29062.562Eptatretus_burgeri
ENSSSCG00000034815U2AF29796.087ENSEASG00005020708U2AF29096.087Equus_asinus_asinus
ENSSSCG00000034815U2AF2100100.000ENSECAG00000010110U2AF2100100.000Equus_caballus
ENSSSCG00000034815U2AF210085.870ENSELUG00000022291u2af2b10085.652Esox_lucius
ENSSSCG00000034815U2AF210087.942ENSELUG00000015850u2af2a10087.917Esox_lucius
ENSSSCG00000034815U2AF29975.319ENSELUG00000018459-10072.863Esox_lucius
ENSSSCG00000034815U2AF210099.158ENSFCAG00000011504U2AF210099.158Felis_catus
ENSSSCG00000034815U2AF29997.441ENSFDAG00000011264U2AF29997.441Fukomys_damarensis
ENSSSCG00000034815U2AF210091.485ENSFHEG00000016025u2af2a10091.485Fundulus_heteroclitus
ENSSSCG00000034815U2AF210089.371ENSGMOG00000004535u2af2a10090.889Gadus_morhua
ENSSSCG00000034815U2AF29896.280ENSGALG00000052748U2AF26596.280Gallus_gallus
ENSSSCG00000034815U2AF29975.108ENSGAFG00000005628-10073.102Gambusia_affinis
ENSSSCG00000034815U2AF210091.485ENSGAFG00000013626u2af2a8891.485Gambusia_affinis
ENSSSCG00000034815U2AF29975.527ENSGACG00000014500-10074.207Gasterosteus_aculeatus
ENSSSCG00000034815U2AF210090.414ENSGACG00000010632U2AF210090.850Gasterosteus_aculeatus
ENSSSCG00000034815U2AF26799.674ENSGAGG00000011849U2AF210099.674Gopherus_agassizii
ENSSSCG00000034815U2AF25689.494ENSGGOG00000036399-9689.494Gorilla_gorilla
ENSSSCG00000034815U2AF29976.383ENSHBUG00000017424-10074.145Haplochromis_burtoni
ENSSSCG00000034815U2AF210090.213ENSHBUG00000013935u2af2a10089.831Haplochromis_burtoni
ENSSSCG00000034815U2AF210099.158ENSHGLG00000005889U2AF210099.158Heterocephalus_glaber_female
ENSSSCG00000034815U2AF29699.127ENSHGLG00100004757U2AF210099.127Heterocephalus_glaber_male
ENSSSCG00000034815U2AF210088.602ENSHCOG00000019367u2af2a10089.032Hippocampus_comes
ENSSSCG00000034815U2AF210084.665ENSIPUG00000007717u2af2a10085.961Ictalurus_punctatus
ENSSSCG00000034815U2AF29988.121ENSIPUG00000009077u2af29987.905Ictalurus_punctatus
ENSSSCG00000034815U2AF29976.044ENSIPUG00000009844-10071.648Ictalurus_punctatus
ENSSSCG00000034815U2AF210099.158ENSSTOG00000019595U2AF210099.158Ictidomys_tridecemlineatus
ENSSSCG00000034815U2AF210099.158ENSJJAG00000017705U2af210099.158Jaculus_jaculus
ENSSSCG00000034815U2AF210089.641ENSKMAG00000005960u2af2a10089.195Kryptolebias_marmoratus
ENSSSCG00000034815U2AF210091.266ENSLBEG00000016162u2af2a10091.266Labrus_bergylta
ENSSSCG00000034815U2AF29674.026ENSLBEG00000005001-8977.482Labrus_bergylta
ENSSSCG00000034815U2AF28098.638ENSLACG00000001648U2AF210098.638Latimeria_chalumnae
ENSSSCG00000034815U2AF29974.786ENSLOCG00000010843-10073.718Lepisosteus_oculatus
ENSSSCG00000034815U2AF27191.667ENSLOCG00000008050u2af2b8096.043Lepisosteus_oculatus
ENSSSCG00000034815U2AF210098.737ENSLAFG00000018056-10098.737Loxodonta_africana
ENSSSCG00000034815U2AF210086.200ENSLAFG00000028496-10086.200Loxodonta_africana
ENSSSCG00000034815U2AF210099.158ENSMFAG00000038383U2AF210099.158Macaca_fascicularis
ENSSSCG00000034815U2AF210098.947ENSMMUG00000004810U2AF210098.947Macaca_mulatta
ENSSSCG00000034815U2AF2100100.000ENSMNEG00000042096U2AF2100100.000Macaca_nemestrina
ENSSSCG00000034815U2AF297100.000ENSMLEG00000032219U2AF289100.000Mandrillus_leucophaeus
ENSSSCG00000034815U2AF29973.987ENSMAMG00000020158-10072.863Mastacembelus_armatus
ENSSSCG00000034815U2AF210089.871ENSMAMG00000019817u2af2a10089.871Mastacembelus_armatus
ENSSSCG00000034815U2AF29976.383ENSMZEG00005023318-10074.145Maylandia_zebra
ENSSSCG00000034815U2AF210091.921ENSMZEG00005016563u2af2a10091.921Maylandia_zebra
ENSSSCG00000034815U2AF29898.280ENSMAUG00000008180U2af29998.280Mesocricetus_auratus
ENSSSCG00000034815U2AF2100100.000ENSMICG00000027681U2AF2100100.000Microcebus_murinus
ENSSSCG00000034815U2AF210099.158ENSMOCG00000013214-10099.158Microtus_ochrogaster
ENSSSCG00000034815U2AF210089.597ENSMOCG00000007227-10087.261Microtus_ochrogaster
ENSSSCG00000034815U2AF26796.743ENSMOCG00000001018-10096.743Microtus_ochrogaster
ENSSSCG00000034815U2AF28595.116ENSMMOG00000016600u2af2a9392.804Mola_mola
ENSSSCG00000034815U2AF29969.723ENSMMOG00000000531-10069.723Mola_mola
ENSSSCG00000034815U2AF210091.921ENSMALG00000009985u2af2a10091.048Monopterus_albus
ENSSSCG00000034815U2AF2100100.000MGP_CAROLIEiJ_G0029150U2af2100100.000Mus_caroli
ENSSSCG00000034815U2AF2100100.000ENSMUSG00000030435U2af2100100.000Mus_musculus
ENSSSCG00000034815U2AF2100100.000MGP_PahariEiJ_G0021017U2af2100100.000Mus_pahari
ENSSSCG00000034815U2AF2100100.000MGP_SPRETEiJ_G0030203U2af2100100.000Mus_spretus
ENSSSCG00000034815U2AF2100100.000ENSMPUG00000007135U2AF2100100.000Mustela_putorius_furo
ENSSSCG00000034815U2AF25294.606ENSMLUG00000011051-10094.606Myotis_lucifugus
ENSSSCG00000034815U2AF210098.947ENSNGAG00000020369U2af210098.947Nannospalax_galili
ENSSSCG00000034815U2AF29675.162ENSNBRG00000011100-8978.692Neolamprologus_brichardi
ENSSSCG00000034815U2AF210090.213ENSNBRG00000002568u2af2a10089.831Neolamprologus_brichardi
ENSSSCG00000034815U2AF210081.169ENSNLEG00000010562U2AF2100100.000Nomascus_leucogenys
ENSSSCG00000034815U2AF28783.619ENSMEUG00000002346U2AF29083.619Notamacropus_eugenii
ENSSSCG00000034815U2AF210094.105ENSODEG00000012729-10094.105Octodon_degus
ENSSSCG00000034815U2AF29969.978ENSODEG00000009254-10070.085Octodon_degus
ENSSSCG00000034815U2AF29976.383ENSONIG00000009682-10074.145Oreochromis_niloticus
ENSSSCG00000034815U2AF210089.641ENSONIG00000012793u2af2a10089.641Oreochromis_niloticus
ENSSSCG00000034815U2AF210087.660ENSORLG00000011545u2af2a10087.261Oryzias_latipes
ENSSSCG00000034815U2AF210087.660ENSORLG00020006941u2af2a10087.261Oryzias_latipes_hni
ENSSSCG00000034815U2AF210087.660ENSORLG00015012843u2af2a10087.261Oryzias_latipes_hsok
ENSSSCG00000034815U2AF210089.339ENSOMEG00000011386u2af2a10089.126Oryzias_melastigma
ENSSSCG00000034815U2AF29856.926ENSOGAG00000034729-8063.978Otolemur_garnettii
ENSSSCG00000034815U2AF210099.158ENSOGAG00000007206-10099.158Otolemur_garnettii
ENSSSCG00000034815U2AF210087.942ENSOARG00000001091U2AF210088.260Ovis_aries
ENSSSCG00000034815U2AF210099.158ENSPPAG00000039782U2AF210099.158Pan_paniscus
ENSSSCG00000034815U2AF210099.158ENSPPRG00000013843U2AF210099.158Panthera_pardus
ENSSSCG00000034815U2AF29986.200ENSPTIG00000005489U2AF29093.237Panthera_tigris_altaica
ENSSSCG00000034815U2AF210099.158ENSPTRG00000011523U2AF2100100.000Pan_troglodytes
ENSSSCG00000034815U2AF2100100.000ENSPANG00000008459U2AF2100100.000Papio_anubis
ENSSSCG00000034815U2AF210089.195ENSPKIG00000024346u2af2b9195.190Paramormyrops_kingsleyae
ENSSSCG00000034815U2AF29977.542ENSPKIG00000014878-10074.145Paramormyrops_kingsleyae
ENSSSCG00000034815U2AF29775.745ENSPSIG00000008014U2AF210075.745Pelodiscus_sinensis
ENSSSCG00000034815U2AF29684.444ENSPMGG00000022980u2af2a9284.988Periophthalmus_magnuspinnatus
ENSSSCG00000034815U2AF210099.158ENSPEMG00000007378U2af2100100.000Peromyscus_maniculatus_bairdii
ENSSSCG00000034815U2AF28378.125ENSPMAG00000004097u2af2a8778.894Petromyzon_marinus
ENSSSCG00000034815U2AF210098.316ENSPCIG00000018013U2AF210098.316Phascolarctos_cinereus
ENSSSCG00000034815U2AF29989.384ENSPFOG00000010799u2af2a10089.384Poecilia_formosa
ENSSSCG00000034815U2AF29975.758ENSPFOG00000006433-10073.536Poecilia_formosa
ENSSSCG00000034815U2AF29377.494ENSPLAG00000003275-8980.446Poecilia_latipinna
ENSSSCG00000034815U2AF210091.485ENSPLAG00000014365u2af2a10091.485Poecilia_latipinna
ENSSSCG00000034815U2AF210091.485ENSPMEG00000002969u2af2a10091.485Poecilia_mexicana
ENSSSCG00000034815U2AF29377.262ENSPMEG00000003734-8980.198Poecilia_mexicana
ENSSSCG00000034815U2AF29974.894ENSPREG00000013036-10075.676Poecilia_reticulata
ENSSSCG00000034815U2AF210089.407ENSPREG00000008739u2af2a10089.407Poecilia_reticulata
ENSSSCG00000034815U2AF29296.751ENSPPYG00000010429-9596.751Pongo_abelii
ENSSSCG00000034815U2AF28683.673ENSPCAG00000003709-9982.266Procavia_capensis
ENSSSCG00000034815U2AF210082.353ENSPCAG00000014399-10082.353Procavia_capensis
ENSSSCG00000034815U2AF210099.158ENSPCOG00000025870U2AF210099.158Propithecus_coquereli
ENSSSCG00000034815U2AF210098.737ENSPVAG00000004540U2AF210098.737Pteropus_vampyrus
ENSSSCG00000034815U2AF210090.213ENSPNYG00000001438u2af2a10089.831Pundamilia_nyererei
ENSSSCG00000034815U2AF29976.383ENSPNYG00000011605-10074.145Pundamilia_nyererei
ENSSSCG00000034815U2AF210088.121ENSPNAG00000017620u2af2a10088.769Pygocentrus_nattereri
ENSSSCG00000034815U2AF29976.596ENSPNAG00000007182-10074.359Pygocentrus_nattereri
ENSSSCG00000034815U2AF29990.132ENSPNAG00000027289u2af2b9989.912Pygocentrus_nattereri
ENSSSCG00000034815U2AF2100100.000ENSRNOG00000015914U2af2100100.000Rattus_norvegicus
ENSSSCG00000034815U2AF210098.947ENSRBIG00000041018U2AF210098.947Rhinopithecus_bieti
ENSSSCG00000034815U2AF28798.792ENSRROG00000031103-10098.792Rhinopithecus_roxellana
ENSSSCG00000034815U2AF210094.480ENSRROG00000031238-10094.480Rhinopithecus_roxellana
ENSSSCG00000034815U2AF2100100.000ENSSBOG00000023891U2AF2100100.000Saimiri_boliviensis_boliviensis
ENSSSCG00000034815U2AF26472.386ENSSHAG00000001167U2AF28577.898Sarcophilus_harrisii
ENSSSCG00000034815U2AF28794.207ENSSFOG00015019182u2af2b8994.430Scleropages_formosus
ENSSSCG00000034815U2AF29976.546ENSSFOG00015003884-9481.888Scleropages_formosus
ENSSSCG00000034815U2AF29976.333ENSSMAG00000013779-10074.145Scophthalmus_maximus
ENSSSCG00000034815U2AF210090.632ENSSMAG00000012582u2af2a10090.632Scophthalmus_maximus
ENSSSCG00000034815U2AF29991.466ENSSDUG00000009457u2af2a10091.466Seriola_dumerili
ENSSSCG00000034815U2AF29674.839ENSSDUG00000021434-8478.313Seriola_dumerili
ENSSSCG00000034815U2AF210091.485ENSSLDG00000022742u2af2a10091.485Seriola_lalandi_dorsalis
ENSSSCG00000034815U2AF29674.839ENSSLDG00000016151-8978.313Seriola_lalandi_dorsalis
ENSSSCG00000034815U2AF210095.359ENSSPUG00000010229U2AF210095.359Sphenodon_punctatus
ENSSSCG00000034815U2AF29976.170ENSSPAG00000005241-10073.932Stegastes_partitus
ENSSSCG00000034815U2AF210090.000ENSSPAG00000022519u2af2a10089.619Stegastes_partitus
ENSSSCG00000034815U2AF29689.569ENSTRUG00000005514u2af2a9090.819Takifugu_rubripes
ENSSSCG00000034815U2AF210089.765ENSTNIG00000008106U2AF210089.765Tetraodon_nigroviridis
ENSSSCG00000034815U2AF29974.837ENSTNIG00000011257-10075.922Tetraodon_nigroviridis
ENSSSCG00000034815U2AF27794.054ENSTBEG00000009104U2AF210094.054Tupaia_belangeri
ENSSSCG00000034815U2AF210099.158ENSTTRG00000000987U2AF210099.158Tursiops_truncatus
ENSSSCG00000034815U2AF29696.061ENSUAMG00000019883U2AF210096.061Ursus_americanus
ENSSSCG00000034815U2AF29696.061ENSUMAG00000024586U2AF2100100.000Ursus_maritimus
ENSSSCG00000034815U2AF297100.000ENSVVUG00000006956U2AF267100.000Vulpes_vulpes
ENSSSCG00000034815U2AF210096.344ENSXETG00000019128u2af210096.344Xenopus_tropicalis
ENSSSCG00000034815U2AF28595.373ENSXCOG00000019406u2af2a9293.300Xiphophorus_couchianus
ENSSSCG00000034815U2AF210091.485ENSXMAG00000011979u2af2a10091.485Xiphophorus_maculatus
ENSSSCG00000034815U2AF29976.170ENSXMAG00000000768-9673.291Xiphophorus_maculatus

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