EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000034853 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 6177 bases
Position: chrY:25247744-25253920
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000035982	RVT_1	PF00078.27	1.1e-24	1	1
ENSSSCP00000035982	RNase_H	PF00075.24	1.5e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000059897	-	6177	-	ENSSSCP00000035982	1144 (aa)	-	F8S321

Gene Model

Click here to download ENSSSCG00000034853's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000034853's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000034853	-	63	42.779	ENSSSCG00000034697	-	56	42.779

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000034853	-	76	34.396	ENSAPEG00000000438	-	97	34.590	Amphiprion_percula
ENSSSCG00000034853	-	88	32.755	ENSACLG00000003782	-	74	32.659	Astatotilapia_calliptera
ENSSSCG00000034853	-	89	34.342	ENSACLG00000023027	-	84	34.532	Astatotilapia_calliptera
ENSSSCG00000034853	-	88	36.190	ENSACLG00000014318	-	75	36.381	Astatotilapia_calliptera
ENSSSCG00000034853	-	53	37.721	ENSACLG00000005138	-	71	37.216	Astatotilapia_calliptera
ENSSSCG00000034853	-	89	33.742	ENSACLG00000006254	-	74	33.742	Astatotilapia_calliptera
ENSSSCG00000034853	-	76	33.591	ENSAMXG00000033455	-	73	33.591	Astyanax_mexicanus
ENSSSCG00000034853	-	86	37.721	ENSAMXG00000033060	-	85	37.132	Astyanax_mexicanus
ENSSSCG00000034853	-	89	36.476	ENSAMXG00000040526	-	89	36.347	Astyanax_mexicanus
ENSSSCG00000034853	-	77	33.907	ENSAMXG00000038483	-	67	33.954	Astyanax_mexicanus
ENSSSCG00000034853	-	88	41.945	ENSBTAG00000052165	-	98	41.945	Bos_taurus
ENSSSCG00000034853	-	66	39.620	ENSCPBG00000009921	-	99	39.620	Chrysemys_picta_bellii
ENSSSCG00000034853	-	81	39.704	ENSCPBG00000009184	-	99	39.704	Chrysemys_picta_bellii
ENSSSCG00000034853	-	86	32.157	ENSCSEG00000009059	-	80	32.157	Cynoglossus_semilaevis
ENSSSCG00000034853	-	79	38.105	ENSCSEG00000019226	-	51	38.321	Cynoglossus_semilaevis
ENSSSCG00000034853	-	86	32.157	ENSCSEG00000011566	-	80	32.157	Cynoglossus_semilaevis
ENSSSCG00000034853	-	86	32.157	ENSCSEG00000013867	-	80	32.157	Cynoglossus_semilaevis
ENSSSCG00000034853	-	86	32.157	ENSCSEG00000012922	-	80	32.157	Cynoglossus_semilaevis
ENSSSCG00000034853	-	86	32.157	ENSCSEG00000018136	-	80	32.157	Cynoglossus_semilaevis
ENSSSCG00000034853	-	89	43.877	ENSECAG00000034459	-	94	43.877	Equus_caballus
ENSSSCG00000034853	-	78	44.676	ENSGALG00000053504	-	96	44.786	Gallus_gallus
ENSSSCG00000034853	-	78	46.213	ENSGALG00000050905	-	96	46.213	Gallus_gallus
ENSSSCG00000034853	-	89	40.758	ENSLBEG00000013565	-	76	40.758	Labrus_bergylta
ENSSSCG00000034853	-	75	33.672	ENSMAMG00000010978	-	70	34.243	Mastacembelus_armatus
ENSSSCG00000034853	-	63	41.870	ENSMODG00000028692	-	100	42.683	Monodelphis_domestica
ENSSSCG00000034853	-	97	39.670	ENSMODG00000028385	-	99	40.331	Monodelphis_domestica
ENSSSCG00000034853	-	53	38.633	ENSMODG00000028221	-	99	39.428	Monodelphis_domestica
ENSSSCG00000034853	-	60	40.309	ENSMODG00000028191	-	98	40.683	Monodelphis_domestica
ENSSSCG00000034853	-	71	40.456	ENSMODG00000027851	-	98	41.056	Monodelphis_domestica
ENSSSCG00000034853	-	51	44.949	ENSMODG00000028325	-	92	45.118	Monodelphis_domestica
ENSSSCG00000034853	-	60	40.309	ENSMODG00000029806	-	98	40.683	Monodelphis_domestica
ENSSSCG00000034853	-	51	37.874	ENSMODG00000027863	-	100	37.874	Monodelphis_domestica
ENSSSCG00000034853	-	72	40.286	ENSMODG00000029316	-	99	41.001	Monodelphis_domestica
ENSSSCG00000034853	-	53	38.278	ENSMODG00000028121	-	99	39.075	Monodelphis_domestica
ENSSSCG00000034853	-	53	38.915	ENSMODG00000029294	-	99	38.915	Monodelphis_domestica
ENSSSCG00000034853	-	53	38.118	ENSMODG00000027524	-	99	38.915	Monodelphis_domestica
ENSSSCG00000034853	-	96	39.912	ENSMODG00000029722	-	99	40.567	Monodelphis_domestica
ENSSSCG00000034853	-	97	38.120	ENSMODG00000027661	-	96	38.120	Monodelphis_domestica
ENSSSCG00000034853	-	65	41.330	ENSMODG00000027664	-	99	42.112	Monodelphis_domestica
ENSSSCG00000034853	-	95	39.200	ENSMODG00000029740	-	99	39.769	Monodelphis_domestica
ENSSSCG00000034853	-	60	40.590	ENSMODG00000029516	-	98	40.967	Monodelphis_domestica
ENSSSCG00000034853	-	64	43.298	ENSMODG00000028686	-	99	43.432	Monodelphis_domestica
ENSSSCG00000034853	-	97	39.756	ENSMODG00000027641	-	99	40.401	Monodelphis_domestica
ENSSSCG00000034853	-	53	37.838	ENSMODG00000029391	-	99	38.633	Monodelphis_domestica
ENSSSCG00000034853	-	70	41.091	ENSMODG00000027448	-	99	41.818	Monodelphis_domestica
ENSSSCG00000034853	-	62	40.853	ENSMODG00000029647	-	89	40.853	Monodelphis_domestica
ENSSSCG00000034853	-	51	41.597	ENSMODG00000028815	-	94	42.061	Monodelphis_domestica
ENSSSCG00000034853	-	97	39.651	ENSMODG00000029698	-	99	40.297	Monodelphis_domestica
ENSSSCG00000034853	-	62	39.889	ENSMODG00000028504	-	78	39.889	Monodelphis_domestica
ENSSSCG00000034853	-	97	39.756	ENSMODG00000027428	-	91	40.279	Monodelphis_domestica
ENSSSCG00000034853	-	97	39.669	ENSMODG00000028573	-	99	40.314	Monodelphis_domestica
ENSSSCG00000034853	-	60	40.449	ENSMODG00000027329	-	98	40.825	Monodelphis_domestica
ENSSSCG00000034853	-	77	34.283	ENSONIG00000021180	-	74	34.283	Oreochromis_niloticus
ENSSSCG00000034853	-	62	38.049	ENSONIG00000021274	-	99	38.049	Oreochromis_niloticus
ENSSSCG00000034853	-	89	33.711	ENSORLG00020007796	-	67	33.711	Oryzias_latipes_hni
ENSSSCG00000034853	-	93	37.466	ENSOMEG00000021132	-	79	38.121	Oryzias_melastigma
ENSSSCG00000034853	-	75	37.738	ENSOMEG00000005516	-	98	37.935	Oryzias_melastigma
ENSSSCG00000034853	-	69	58.448	ENSOARG00000015221	-	95	58.448	Ovis_aries
ENSSSCG00000034853	-	75	56.556	ENSOARG00000014856	-	94	56.556	Ovis_aries
ENSSSCG00000034853	-	75	56.556	ENSOARG00000009849	-	93	56.556	Ovis_aries
ENSSSCG00000034853	-	56	54.419	ENSOARG00000015892	-	81	54.419	Ovis_aries
ENSSSCG00000034853	-	58	53.994	ENSOARG00000001648	-	95	53.994	Ovis_aries
ENSSSCG00000034853	-	50	51.890	ENSOARG00000000143	-	93	51.890	Ovis_aries
ENSSSCG00000034853	-	95	42.034	ENSPSIG00000001866	-	97	42.457	Pelodiscus_sinensis
ENSSSCG00000034853	-	92	34.799	ENSXMAG00000022532	-	77	34.799	Xiphophorus_maculatus
ENSSSCG00000034853	-	71	35.364	ENSXMAG00000024544	-	87	35.364	Xiphophorus_maculatus