EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000035258 (Gene tree)
Gene ID: 100624155
Gene Symbol: RABL3
Alias: MGC23920
Full Name: RAB%2C member of RAS oncogene family like 3
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 52129 bases
Position: chr13:139603449-139655577
Accession: 100624155
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000037094	MMR_HSR1	PF01926.23	6.2e-06	1	1
ENSSSCP00000043165	MMR_HSR1	PF01926.23	8.7e-06	1	1
ENSSSCP00000059546	MMR_HSR1	PF01926.23	8.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000056524	RABL3-203	1766	-	ENSSSCP00000037094	212 (aa)	-	A0A286ZZM2
ENSSSCT00000058308	RABL3-202	5803	XM_021070305	ENSSSCP00000043165	236 (aa)	XP_020925964	A0A287BTI7
ENSSSCT00000043074	RABL3-201	2311	-	ENSSSCP00000059546	236 (aa)	-	A0A287BTI7

Gene Model

Click here to download ENSSSCG00000035258's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000035258's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000035258	RABL3	60	30.075	ENSSSCG00000025041	-	70	30.075
ENSSSCG00000035258	RABL3	60	30.469	ENSSSCG00000033876	RAB35	59	30.469

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000035258	RABL3	100	97.458	ENSG00000144840	RABL3	100	98.450	Homo_sapiens
ENSSSCG00000035258	RABL3	100	87.342	ENSAPOG00000024479	rabl3	100	87.342	Acanthochromis_polyacanthus
ENSSSCG00000035258	RABL3	100	98.729	ENSAMEG00000004809	RABL3	100	98.729	Ailuropoda_melanoleuca
ENSSSCG00000035258	RABL3	100	83.898	ENSACIG00000014343	rabl3	100	83.898	Amphilophus_citrinellus
ENSSSCG00000035258	RABL3	100	87.342	ENSAOCG00000011851	rabl3	100	87.342	Amphiprion_ocellaris
ENSSSCG00000035258	RABL3	100	87.342	ENSAPEG00000011214	rabl3	100	87.342	Amphiprion_percula
ENSSSCG00000035258	RABL3	100	88.136	ENSATEG00000003503	rabl3	100	88.136	Anabas_testudineus
ENSSSCG00000035258	RABL3	100	87.712	ENSACAG00000011313	-	100	87.712	Anolis_carolinensis
ENSSSCG00000035258	RABL3	100	98.729	ENSANAG00000027278	RABL3	100	98.729	Aotus_nancymaae
ENSSSCG00000035258	RABL3	100	87.288	ENSACLG00000009820	rabl3	100	87.288	Astatotilapia_calliptera
ENSSSCG00000035258	RABL3	100	87.712	ENSAMXG00000038716	rabl3	100	87.712	Astyanax_mexicanus
ENSSSCG00000035258	RABL3	100	99.576	ENSBTAG00000015898	RABL3	100	99.576	Bos_taurus
ENSSSCG00000035258	RABL3	100	98.729	ENSCJAG00000008611	RABL3	100	98.729	Callithrix_jacchus
ENSSSCG00000035258	RABL3	100	99.576	ENSCAFG00000011292	RABL3	89	99.576	Canis_familiaris
ENSSSCG00000035258	RABL3	100	99.576	ENSCAFG00020006397	RABL3	100	99.576	Canis_lupus_dingo
ENSSSCG00000035258	RABL3	100	99.576	ENSCHIG00000017365	RABL3	100	99.576	Capra_hircus
ENSSSCG00000035258	RABL3	100	95.763	ENSCPOG00000009645	RABL3	100	95.763	Cavia_porcellus
ENSSSCG00000035258	RABL3	100	97.881	ENSCATG00000032561	RABL3	100	97.881	Cercocebus_atys
ENSSSCG00000035258	RABL3	100	95.339	ENSCLAG00000010855	RABL3	100	95.339	Chinchilla_lanigera
ENSSSCG00000035258	RABL3	99	97.854	ENSCSAG00000007155	RABL3	100	97.854	Chlorocebus_sabaeus
ENSSSCG00000035258	RABL3	100	95.763	ENSCPBG00000001999	RABL3	100	95.763	Chrysemys_picta_bellii
ENSSSCG00000035258	RABL3	100	97.881	ENSCANG00000031684	RABL3	100	97.881	Colobus_angolensis_palliatus
ENSSSCG00000035258	RABL3	100	95.339	ENSCGRG00001021537	Rabl3	100	95.339	Cricetulus_griseus_chok1gshd
ENSSSCG00000035258	RABL3	100	95.339	ENSCGRG00000002114	Rabl3	100	95.339	Cricetulus_griseus_crigri
ENSSSCG00000035258	RABL3	100	82.629	ENSCSEG00000014982	rabl3	100	82.629	Cynoglossus_semilaevis
ENSSSCG00000035258	RABL3	100	81.604	ENSCVAG00000009904	rabl3	100	81.604	Cyprinodon_variegatus
ENSSSCG00000035258	RABL3	100	85.593	ENSDARG00000040959	rabl3	100	85.593	Danio_rerio
ENSSSCG00000035258	RABL3	100	97.034	ENSDNOG00000008174	RABL3	100	97.034	Dasypus_novemcinctus
ENSSSCG00000035258	RABL3	100	97.034	ENSETEG00000010206	RABL3	100	97.034	Echinops_telfairi
ENSSSCG00000035258	RABL3	100	100.000	ENSECAG00000023059	RABL3	100	100.000	Equus_caballus
ENSSSCG00000035258	RABL3	100	91.949	ENSEEUG00000002897	RABL3	100	91.949	Erinaceus_europaeus
ENSSSCG00000035258	RABL3	100	86.017	ENSELUG00000014758	rabl3	100	86.017	Esox_lucius
ENSSSCG00000035258	RABL3	100	98.729	ENSFCAG00000031879	RABL3	100	98.585	Felis_catus
ENSSSCG00000035258	RABL3	100	94.068	ENSFALG00000005296	RABL3	100	94.068	Ficedula_albicollis
ENSSSCG00000035258	RABL3	100	97.034	ENSFDAG00000000307	RABL3	100	97.034	Fukomys_damarensis
ENSSSCG00000035258	RABL3	100	86.017	ENSFHEG00000011273	rabl3	100	86.017	Fundulus_heteroclitus
ENSSSCG00000035258	RABL3	100	85.169	ENSGMOG00000007845	rabl3	100	85.169	Gadus_morhua
ENSSSCG00000035258	RABL3	100	95.339	ENSGALG00000014949	RABL3	100	95.339	Gallus_gallus
ENSSSCG00000035258	RABL3	100	84.746	ENSGAFG00000015953	rabl3	100	84.746	Gambusia_affinis
ENSSSCG00000035258	RABL3	100	86.441	ENSGACG00000007387	rabl3	100	91.473	Gasterosteus_aculeatus
ENSSSCG00000035258	RABL3	100	96.610	ENSGAGG00000003677	RABL3	100	96.610	Gopherus_agassizii
ENSSSCG00000035258	RABL3	100	97.458	ENSGGOG00000006059	RABL3	100	97.458	Gorilla_gorilla
ENSSSCG00000035258	RABL3	100	87.712	ENSHBUG00000019478	rabl3	93	87.712	Haplochromis_burtoni
ENSSSCG00000035258	RABL3	100	97.034	ENSHGLG00000014491	RABL3	100	97.034	Heterocephalus_glaber_female
ENSSSCG00000035258	RABL3	100	97.034	ENSHGLG00100004866	RABL3	100	97.034	Heterocephalus_glaber_male
ENSSSCG00000035258	RABL3	100	82.547	ENSHCOG00000019245	rabl3	100	82.547	Hippocampus_comes
ENSSSCG00000035258	RABL3	100	87.712	ENSIPUG00000012657	rabl3	100	87.712	Ictalurus_punctatus
ENSSSCG00000035258	RABL3	100	97.034	ENSSTOG00000019452	RABL3	100	97.034	Ictidomys_tridecemlineatus
ENSSSCG00000035258	RABL3	100	97.642	ENSJJAG00000023553	Rabl3	100	97.642	Jaculus_jaculus
ENSSSCG00000035258	RABL3	100	81.780	ENSKMAG00000015464	rabl3	100	81.780	Kryptolebias_marmoratus
ENSSSCG00000035258	RABL3	100	87.764	ENSLBEG00000020595	rabl3	100	87.764	Labrus_bergylta
ENSSSCG00000035258	RABL3	100	87.764	ENSLBEG00000010627	-	100	87.764	Labrus_bergylta
ENSSSCG00000035258	RABL3	100	89.407	ENSLOCG00000006265	rabl3	100	89.407	Lepisosteus_oculatus
ENSSSCG00000035258	RABL3	100	97.034	ENSLAFG00000003711	RABL3	100	97.034	Loxodonta_africana
ENSSSCG00000035258	RABL3	100	97.881	ENSMFAG00000031923	RABL3	100	97.881	Macaca_fascicularis
ENSSSCG00000035258	RABL3	100	97.642	ENSMMUG00000001594	RABL3	100	97.642	Macaca_mulatta
ENSSSCG00000035258	RABL3	100	97.881	ENSMNEG00000043980	RABL3	100	97.881	Macaca_nemestrina
ENSSSCG00000035258	RABL3	100	97.881	ENSMLEG00000028177	RABL3	100	97.881	Mandrillus_leucophaeus
ENSSSCG00000035258	RABL3	100	87.288	ENSMAMG00000015155	rabl3	100	87.288	Mastacembelus_armatus
ENSSSCG00000035258	RABL3	100	87.288	ENSMZEG00005002607	rabl3	100	87.288	Maylandia_zebra
ENSSSCG00000035258	RABL3	100	95.339	ENSMAUG00000013022	Rabl3	100	95.339	Mesocricetus_auratus
ENSSSCG00000035258	RABL3	100	99.153	ENSMICG00000049288	RABL3	100	99.153	Microcebus_murinus
ENSSSCG00000035258	RABL3	100	93.220	ENSMOCG00000015237	Rabl3	100	93.220	Microtus_ochrogaster
ENSSSCG00000035258	RABL3	100	83.051	ENSMMOG00000005628	rabl3	100	83.051	Mola_mola
ENSSSCG00000035258	RABL3	100	92.797	ENSMODG00000018232	RABL3	100	92.797	Monodelphis_domestica
ENSSSCG00000035258	RABL3	100	82.427	ENSMALG00000018837	rabl3	100	82.427	Monopterus_albus
ENSSSCG00000035258	RABL3	100	94.068	MGP_CAROLIEiJ_G0020728	Rabl3	100	96.899	Mus_caroli
ENSSSCG00000035258	RABL3	100	94.068	ENSMUSG00000022827	Rabl3	100	96.899	Mus_musculus
ENSSSCG00000035258	RABL3	100	93.220	MGP_PahariEiJ_G0016429	Rabl3	100	96.899	Mus_pahari
ENSSSCG00000035258	RABL3	100	94.068	MGP_SPRETEiJ_G0021628	Rabl3	100	96.899	Mus_spretus
ENSSSCG00000035258	RABL3	100	99.576	ENSMPUG00000008257	RABL3	89	99.576	Mustela_putorius_furo
ENSSSCG00000035258	RABL3	100	95.763	ENSMLUG00000014113	RABL3	100	95.763	Myotis_lucifugus
ENSSSCG00000035258	RABL3	98	96.635	ENSNGAG00000001939	Rabl3	100	96.635	Nannospalax_galili
ENSSSCG00000035258	RABL3	92	90.278	ENSNBRG00000012423	rabl3	92	90.278	Neolamprologus_brichardi
ENSSSCG00000035258	RABL3	100	97.458	ENSNLEG00000031723	RABL3	100	97.458	Nomascus_leucogenys
ENSSSCG00000035258	RABL3	100	94.492	ENSMEUG00000006606	RABL3	100	94.492	Notamacropus_eugenii
ENSSSCG00000035258	RABL3	100	94.492	ENSODEG00000004758	-	100	94.492	Octodon_degus
ENSSSCG00000035258	RABL3	100	88.136	ENSONIG00000004281	rabl3	100	88.136	Oreochromis_niloticus
ENSSSCG00000035258	RABL3	99	93.162	ENSOANG00000003928	RABL3	99	93.162	Ornithorhynchus_anatinus
ENSSSCG00000035258	RABL3	100	86.864	ENSORLG00000020457	rabl3	100	86.864	Oryzias_latipes
ENSSSCG00000035258	RABL3	100	86.864	ENSORLG00020008991	rabl3	100	83.475	Oryzias_latipes_hni
ENSSSCG00000035258	RABL3	100	86.864	ENSORLG00015005649	rabl3	88	86.864	Oryzias_latipes_hsok
ENSSSCG00000035258	RABL3	100	87.288	ENSOMEG00000015066	rabl3	100	87.288	Oryzias_melastigma
ENSSSCG00000035258	RABL3	100	98.305	ENSOGAG00000005961	RABL3	100	98.305	Otolemur_garnettii
ENSSSCG00000035258	RABL3	100	99.576	ENSOARG00000019939	RABL3	100	99.576	Ovis_aries
ENSSSCG00000035258	RABL3	94	96.847	ENSPPAG00000036997	RABL3	87	96.847	Pan_paniscus
ENSSSCG00000035258	RABL3	100	99.576	ENSPPRG00000016325	RABL3	100	99.576	Panthera_pardus
ENSSSCG00000035258	RABL3	100	99.576	ENSPTIG00000018021	RABL3	100	99.576	Panthera_tigris_altaica
ENSSSCG00000035258	RABL3	100	97.458	ENSPTRG00000015272	RABL3	100	97.458	Pan_troglodytes
ENSSSCG00000035258	RABL3	100	97.881	ENSPANG00000001339	RABL3	100	97.881	Papio_anubis
ENSSSCG00000035258	RABL3	100	86.864	ENSPKIG00000007818	rabl3	100	86.864	Paramormyrops_kingsleyae
ENSSSCG00000035258	RABL3	100	95.339	ENSPSIG00000011358	RABL3	100	95.339	Pelodiscus_sinensis
ENSSSCG00000035258	RABL3	100	84.322	ENSPMGG00000015794	rabl3	100	84.322	Periophthalmus_magnuspinnatus
ENSSSCG00000035258	RABL3	100	94.915	ENSPEMG00000016913	Rabl3	100	94.915	Peromyscus_maniculatus_bairdii
ENSSSCG00000035258	RABL3	100	94.915	ENSPCIG00000018922	RABL3	100	94.915	Phascolarctos_cinereus
ENSSSCG00000035258	RABL3	100	85.169	ENSPFOG00000008586	rabl3	100	85.169	Poecilia_formosa
ENSSSCG00000035258	RABL3	100	85.169	ENSPLAG00000014482	rabl3	100	85.169	Poecilia_latipinna
ENSSSCG00000035258	RABL3	100	85.169	ENSPMEG00000002295	rabl3	100	85.169	Poecilia_mexicana
ENSSSCG00000035258	RABL3	100	85.169	ENSPREG00000014815	rabl3	100	85.169	Poecilia_reticulata
ENSSSCG00000035258	RABL3	100	97.881	ENSPPYG00000013501	RABL3	100	97.881	Pongo_abelii
ENSSSCG00000035258	RABL3	100	99.576	ENSPCOG00000022230	RABL3	100	99.576	Propithecus_coquereli
ENSSSCG00000035258	RABL3	100	96.610	ENSPVAG00000010013	RABL3	100	96.610	Pteropus_vampyrus
ENSSSCG00000035258	RABL3	100	87.712	ENSPNYG00000006659	rabl3	100	87.712	Pundamilia_nyererei
ENSSSCG00000035258	RABL3	100	88.136	ENSPNAG00000000748	rabl3	100	88.136	Pygocentrus_nattereri
ENSSSCG00000035258	RABL3	100	94.068	ENSRNOG00000026085	Rabl3	100	94.068	Rattus_norvegicus
ENSSSCG00000035258	RABL3	100	97.881	ENSRBIG00000040941	RABL3	100	97.881	Rhinopithecus_bieti
ENSSSCG00000035258	RABL3	100	97.881	ENSRROG00000043745	RABL3	100	97.881	Rhinopithecus_roxellana
ENSSSCG00000035258	RABL3	100	98.729	ENSSBOG00000004022	RABL3	100	98.729	Saimiri_boliviensis_boliviensis
ENSSSCG00000035258	RABL3	100	95.339	ENSSHAG00000012233	RABL3	100	95.339	Sarcophilus_harrisii
ENSSSCG00000035258	RABL3	100	88.983	ENSSFOG00015010171	rabl3	100	88.983	Scleropages_formosus
ENSSSCG00000035258	RABL3	100	86.498	ENSSMAG00000002403	rabl3	100	86.498	Scophthalmus_maximus
ENSSSCG00000035258	RABL3	100	88.136	ENSSDUG00000012078	rabl3	100	88.136	Seriola_dumerili
ENSSSCG00000035258	RABL3	100	88.559	ENSSLDG00000021899	rabl3	100	88.559	Seriola_lalandi_dorsalis
ENSSSCG00000035258	RABL3	100	98.729	ENSSARG00000008316	RABL3	100	98.729	Sorex_araneus
ENSSSCG00000035258	RABL3	100	94.492	ENSSPUG00000017490	RABL3	100	94.492	Sphenodon_punctatus
ENSSSCG00000035258	RABL3	100	87.712	ENSSPAG00000011642	rabl3	100	87.712	Stegastes_partitus
ENSSSCG00000035258	RABL3	100	94.492	ENSTGUG00000013374	RABL3	100	94.492	Taeniopygia_guttata
ENSSSCG00000035258	RABL3	86	89.071	ENSTRUG00000007846	RABL3	100	93.750	Takifugu_rubripes
ENSSSCG00000035258	RABL3	100	82.627	ENSTBEG00000005153	RABL3	100	82.627	Tupaia_belangeri
ENSSSCG00000035258	RABL3	100	98.305	ENSUAMG00000005299	RABL3	100	98.305	Ursus_americanus
ENSSSCG00000035258	RABL3	100	97.881	ENSUMAG00000025256	RABL3	89	97.881	Ursus_maritimus
ENSSSCG00000035258	RABL3	100	100.000	ENSVPAG00000003776	RABL3	100	100.000	Vicugna_pacos
ENSSSCG00000035258	RABL3	100	99.576	ENSVVUG00000022300	RABL3	89	99.576	Vulpes_vulpes
ENSSSCG00000035258	RABL3	100	85.169	ENSXMAG00000003244	rabl3	100	85.169	Xiphophorus_maculatus