EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000035505 (Gene tree)
Gene ID: 110262114
Gene Symbol: YTHDC1
Alias: KIAA1966|YT521|YT521-B
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 123203 bases
Position: chr8:65999525-66122727
Accession: 110262114
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000033587	YTH	PF04146.15	3.8e-40	1	1
ENSSSCP00000043625	YTH	PF04146.15	4.1e-40	1	1
ENSSSCP00000038585	YTH	PF04146.15	4.3e-40	1	1
ENSSSCP00000049284	YTH	PF04146.15	4.3e-40	1	1
ENSSSCP00000041165	YTH	PF04146.15	4.3e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000051191	YTHDC1-204	3443	XM_021101399	ENSSSCP00000041165	740 (aa)	XP_020957058	A0A287AB29
ENSSSCT00000053699	YTHDC1-201	2220	-	ENSSSCP00000038585	739 (aa)	-	A0A287A3X4
ENSSSCT00000039784	YTHDC1-202	2279	-	ENSSSCP00000049284	743 (aa)	-	A0A287AZ94
ENSSSCT00000046524	YTHDC1-203	2467	-	ENSSSCP00000033587	689 (aa)	-	A0A286ZQ41
ENSSSCT00000046446	YTHDC1-205	3389	XM_021101401	ENSSSCP00000043625	722 (aa)	XP_020957060	A0A287AIB6

Gene Model

Click here to download ENSSSCG00000035505's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000035505's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000035505	YTHDC1	100	96.761	ENSG00000083896	YTHDC1	100	96.761	Homo_sapiens
ENSSSCG00000035505	YTHDC1	61	59.574	ENSAPOG00000013997	ythdc1	57	63.221	Acanthochromis_polyacanthus
ENSSSCG00000035505	YTHDC1	100	97.162	ENSAMEG00000005688	YTHDC1	99	98.199	Ailuropoda_melanoleuca
ENSSSCG00000035505	YTHDC1	82	53.529	ENSACIG00000019728	ythdc1	80	59.390	Amphilophus_citrinellus
ENSSSCG00000035505	YTHDC1	61	60.811	ENSAOCG00000000239	ythdc1	59	66.970	Amphiprion_ocellaris
ENSSSCG00000035505	YTHDC1	53	64.960	ENSAPEG00000000618	ythdc1	53	68.280	Amphiprion_percula
ENSSSCG00000035505	YTHDC1	92	82.862	ENSAPLG00000009921	YTHDC1	60	96.420	Anas_platyrhynchos
ENSSSCG00000035505	YTHDC1	93	82.096	ENSACAG00000009697	YTHDC1	86	81.761	Anolis_carolinensis
ENSSSCG00000035505	YTHDC1	100	96.522	ENSANAG00000001522	YTHDC1	100	95.682	Aotus_nancymaae
ENSSSCG00000035505	YTHDC1	61	59.685	ENSACLG00000019371	ythdc1	59	66.133	Astatotilapia_calliptera
ENSSSCG00000035505	YTHDC1	93	64.151	ENSAMXG00000006978	ythdc1	58	79.814	Astyanax_mexicanus
ENSSSCG00000035505	YTHDC1	100	96.892	ENSBTAG00000015572	YTHDC1	99	97.922	Bos_taurus
ENSSSCG00000035505	YTHDC1	100	96.086	ENSCJAG00000009934	YTHDC1	99	97.095	Callithrix_jacchus
ENSSSCG00000035505	YTHDC1	100	97.027	ENSCAFG00000002821	YTHDC1	99	98.061	Canis_familiaris
ENSSSCG00000035505	YTHDC1	100	97.027	ENSCAFG00020027112	YTHDC1	99	98.061	Canis_lupus_dingo
ENSSSCG00000035505	YTHDC1	99	93.829	ENSCHIG00000004810	YTHDC1	98	93.829	Capra_hircus
ENSSSCG00000035505	YTHDC1	100	96.221	ENSTSYG00000011668	YTHDC1	99	97.234	Carlito_syrichta
ENSSSCG00000035505	YTHDC1	90	67.331	ENSCAPG00000008722	YTHDC1	90	67.025	Cavia_aperea
ENSSSCG00000035505	YTHDC1	93	85.714	ENSCPOG00000010929	YTHDC1	92	85.277	Cavia_porcellus
ENSSSCG00000035505	YTHDC1	100	95.816	ENSCCAG00000035754	YTHDC1	99	96.819	Cebus_capucinus
ENSSSCG00000035505	YTHDC1	100	96.896	ENSCATG00000036320	YTHDC1	100	96.896	Cercocebus_atys
ENSSSCG00000035505	YTHDC1	92	93.701	ENSCLAG00000005482	YTHDC1	92	93.195	Chinchilla_lanigera
ENSSSCG00000035505	YTHDC1	100	95.816	ENSCSAG00000005252	YTHDC1	99	96.819	Chlorocebus_sabaeus
ENSSSCG00000035505	YTHDC1	91	86.438	ENSCPBG00000021965	YTHDC1	63	96.659	Chrysemys_picta_bellii
ENSSSCG00000035505	YTHDC1	100	96.812	ENSCANG00000004769	YTHDC1	99	96.957	Colobus_angolensis_palliatus
ENSSSCG00000035505	YTHDC1	100	95.412	ENSCGRG00001000816	Ythdc1	100	95.412	Cricetulus_griseus_chok1gshd
ENSSSCG00000035505	YTHDC1	100	94.058	ENSCGRG00000009807	Ythdc1	100	93.878	Cricetulus_griseus_crigri
ENSSSCG00000035505	YTHDC1	61	59.740	ENSCSEG00000020404	ythdc1	59	65.982	Cynoglossus_semilaevis
ENSSSCG00000035505	YTHDC1	61	59.041	ENSCVAG00000022349	ythdc1	59	66.055	Cyprinodon_variegatus
ENSSSCG00000035505	YTHDC1	93	63.343	ENSDARG00000051953	ythdc1	58	78.588	Danio_rerio
ENSSSCG00000035505	YTHDC1	100	94.340	ENSDNOG00000004949	YTHDC1	100	94.340	Dasypus_novemcinctus
ENSSSCG00000035505	YTHDC1	100	96.372	ENSDORG00000013045	Ythdc1	100	96.399	Dipodomys_ordii
ENSSSCG00000035505	YTHDC1	78	98.734	ENSETEG00000001878	YTHDC1	78	98.734	Echinops_telfairi
ENSSSCG00000035505	YTHDC1	100	97.568	ENSEASG00005018383	YTHDC1	100	98.532	Equus_asinus_asinus
ENSSSCG00000035505	YTHDC1	100	97.027	ENSECAG00000018303	YTHDC1	100	97.944	Equus_caballus
ENSSSCG00000035505	YTHDC1	100	95.135	ENSEEUG00000015466	YTHDC1	100	95.135	Erinaceus_europaeus
ENSSSCG00000035505	YTHDC1	93	61.593	ENSELUG00000014029	ythdc1	57	76.716	Esox_lucius
ENSSSCG00000035505	YTHDC1	100	96.757	ENSFCAG00000026791	YTHDC1	99	97.784	Felis_catus
ENSSSCG00000035505	YTHDC1	68	87.613	ENSFALG00000006581	YTHDC1	87	95.000	Ficedula_albicollis
ENSSSCG00000035505	YTHDC1	100	94.203	ENSFDAG00000018560	YTHDC1	100	95.574	Fukomys_damarensis
ENSSSCG00000035505	YTHDC1	63	68.519	ENSFHEG00000001286	ythdc1	60	55.723	Fundulus_heteroclitus
ENSSSCG00000035505	YTHDC1	63	64.539	ENSGMOG00000018815	ythdc1	73	68.085	Gadus_morhua
ENSSSCG00000035505	YTHDC1	91	85.224	ENSGALG00000035906	YTHDC1	56	96.181	Gallus_gallus
ENSSSCG00000035505	YTHDC1	61	63.023	ENSGACG00000015486	ythdc1	57	62.937	Gasterosteus_aculeatus
ENSSSCG00000035505	YTHDC1	93	85.881	ENSGAGG00000007108	YTHDC1	60	96.253	Gopherus_agassizii
ENSSSCG00000035505	YTHDC1	100	96.896	ENSGGOG00000021958	YTHDC1	100	96.896	Gorilla_gorilla
ENSSSCG00000035505	YTHDC1	93	51.460	ENSHBUG00000019288	ythdc1	59	66.133	Haplochromis_burtoni
ENSSSCG00000035505	YTHDC1	100	95.412	ENSHGLG00000006319	-	100	95.412	Heterocephalus_glaber_female
ENSSSCG00000035505	YTHDC1	95	67.949	ENSHGLG00000003239	-	57	77.990	Heterocephalus_glaber_female
ENSSSCG00000035505	YTHDC1	95	66.950	ENSHGLG00100008060	-	57	75.534	Heterocephalus_glaber_male
ENSSSCG00000035505	YTHDC1	100	94.348	ENSHGLG00100001556	-	100	94.672	Heterocephalus_glaber_male
ENSSSCG00000035505	YTHDC1	69	70.213	ENSHCOG00000001520	ythdc1	84	70.213	Hippocampus_comes
ENSSSCG00000035505	YTHDC1	93	66.286	ENSIPUG00000018136	ythdc1	61	83.991	Ictalurus_punctatus
ENSSSCG00000035505	YTHDC1	100	96.896	ENSSTOG00000013652	YTHDC1	100	96.896	Ictidomys_tridecemlineatus
ENSSSCG00000035505	YTHDC1	92	90.079	ENSJJAG00000010268	Ythdc1	93	90.694	Jaculus_jaculus
ENSSSCG00000035505	YTHDC1	61	59.865	ENSKMAG00000006483	ythdc1	85	65.525	Kryptolebias_marmoratus
ENSSSCG00000035505	YTHDC1	64	63.462	ENSLBEG00000020831	ythdc1	72	75.000	Labrus_bergylta
ENSSSCG00000035505	YTHDC1	92	73.438	ENSLACG00000004893	YTHDC1	92	74.068	Latimeria_chalumnae
ENSSSCG00000035505	YTHDC1	93	73.149	ENSLOCG00000003045	ythdc1	92	87.264	Lepisosteus_oculatus
ENSSSCG00000035505	YTHDC1	100	95.951	ENSLAFG00000021592	YTHDC1	100	99.160	Loxodonta_africana
ENSSSCG00000035505	YTHDC1	100	97.031	ENSMFAG00000031927	YTHDC1	100	97.031	Macaca_fascicularis
ENSSSCG00000035505	YTHDC1	100	96.812	ENSMMUG00000002265	YTHDC1	100	96.862	Macaca_mulatta
ENSSSCG00000035505	YTHDC1	100	96.812	ENSMNEG00000033751	YTHDC1	99	96.957	Macaca_nemestrina
ENSSSCG00000035505	YTHDC1	100	96.812	ENSMLEG00000042147	YTHDC1	99	96.957	Mandrillus_leucophaeus
ENSSSCG00000035505	YTHDC1	56	61.176	ENSMAMG00000013122	ythdc1	58	66.136	Mastacembelus_armatus
ENSSSCG00000035505	YTHDC1	61	59.009	ENSMZEG00005023173	ythdc1	59	66.133	Maylandia_zebra
ENSSSCG00000035505	YTHDC1	93	82.678	ENSMGAG00000010391	YTHDC1	59	96.181	Meleagris_gallopavo
ENSSSCG00000035505	YTHDC1	100	91.633	ENSMAUG00000001286	Ythdc1	100	91.633	Mesocricetus_auratus
ENSSSCG00000035505	YTHDC1	100	97.301	ENSMICG00000034640	YTHDC1	100	97.301	Microcebus_murinus
ENSSSCG00000035505	YTHDC1	100	95.412	ENSMOCG00000020201	Ythdc1	100	95.412	Microtus_ochrogaster
ENSSSCG00000035505	YTHDC1	69	57.113	ENSMODG00000009173	-	88	62.077	Monodelphis_domestica
ENSSSCG00000035505	YTHDC1	50	59.483	ENSMODG00000004117	-	92	63.259	Monodelphis_domestica
ENSSSCG00000035505	YTHDC1	93	87.609	ENSMODG00000020754	-	85	86.142	Monodelphis_domestica
ENSSSCG00000035505	YTHDC1	86	68.233	ENSMODG00000014337	-	95	69.059	Monodelphis_domestica
ENSSSCG00000035505	YTHDC1	96	50.769	ENSMODG00000010076	-	60	62.019	Monodelphis_domestica
ENSSSCG00000035505	YTHDC1	58	67.797	ENSMALG00000013412	ythdc1	56	68.378	Monopterus_albus
ENSSSCG00000035505	YTHDC1	93	93.586	MGP_CAROLIEiJ_G0027347	Ythdc1	97	91.107	Mus_caroli
ENSSSCG00000035505	YTHDC1	93	93.878	ENSMUSG00000035851	Ythdc1	97	89.493	Mus_musculus
ENSSSCG00000035505	YTHDC1	93	94.169	MGP_PahariEiJ_G0017126	Ythdc1	97	89.681	Mus_pahari
ENSSSCG00000035505	YTHDC1	93	94.169	MGP_SPRETEiJ_G0028339	Ythdc1	97	89.681	Mus_spretus
ENSSSCG00000035505	YTHDC1	100	95.791	ENSMLUG00000016300	YTHDC1	100	97.091	Myotis_lucifugus
ENSSSCG00000035505	YTHDC1	59	91.059	ENSNGAG00000024000	Ythdc1	93	89.906	Nannospalax_galili
ENSSSCG00000035505	YTHDC1	64	63.222	ENSNBRG00000007663	ythdc1	70	66.355	Neolamprologus_brichardi
ENSSSCG00000035505	YTHDC1	100	96.226	ENSNLEG00000009202	YTHDC1	99	96.306	Nomascus_leucogenys
ENSSSCG00000035505	YTHDC1	83	79.479	ENSMEUG00000007128	YTHDC1	81	79.479	Notamacropus_eugenii
ENSSSCG00000035505	YTHDC1	75	95.568	ENSOPRG00000008986	YTHDC1	74	97.734	Ochotona_princeps
ENSSSCG00000035505	YTHDC1	100	94.630	ENSODEG00000001715	YTHDC1	100	93.919	Octodon_degus
ENSSSCG00000035505	YTHDC1	93	52.156	ENSONIG00000012651	ythdc1	58	67.898	Oreochromis_niloticus
ENSSSCG00000035505	YTHDC1	92	77.273	ENSOANG00000014398	YTHDC1	55	96.962	Ornithorhynchus_anatinus
ENSSSCG00000035505	YTHDC1	93	79.855	ENSOCUG00000015886	YTHDC1	56	95.455	Oryctolagus_cuniculus
ENSSSCG00000035505	YTHDC1	51	67.021	ENSORLG00000030544	ythdc1	61	68.856	Oryzias_latipes
ENSSSCG00000035505	YTHDC1	51	66.223	ENSORLG00020019316	ythdc1	61	68.856	Oryzias_latipes_hni
ENSSSCG00000035505	YTHDC1	61	60.045	ENSOMEG00000000551	ythdc1	60	64.977	Oryzias_melastigma
ENSSSCG00000035505	YTHDC1	100	95.007	ENSOGAG00000003362	YTHDC1	100	95.007	Otolemur_garnettii
ENSSSCG00000035505	YTHDC1	100	96.892	ENSOARG00000008633	YTHDC1	99	97.922	Ovis_aries
ENSSSCG00000035505	YTHDC1	100	96.761	ENSPPAG00000041315	YTHDC1	100	96.761	Pan_paniscus
ENSSSCG00000035505	YTHDC1	100	97.973	ENSPPRG00000011979	YTHDC1	100	97.973	Panthera_pardus
ENSSSCG00000035505	YTHDC1	100	97.533	ENSPTIG00000015527	YTHDC1	100	97.671	Panthera_tigris_altaica
ENSSSCG00000035505	YTHDC1	100	96.761	ENSPTRG00000016105	YTHDC1	100	96.761	Pan_troglodytes
ENSSSCG00000035505	YTHDC1	100	96.896	ENSPANG00000021590	YTHDC1	100	96.896	Papio_anubis
ENSSSCG00000035505	YTHDC1	93	68.759	ENSPKIG00000018497	ythdc1	85	67.488	Paramormyrops_kingsleyae
ENSSSCG00000035505	YTHDC1	92	84.748	ENSPSIG00000002782	YTHDC1	60	96.420	Pelodiscus_sinensis
ENSSSCG00000035505	YTHDC1	66	51.667	ENSPMGG00000000970	-	70	62.829	Periophthalmus_magnuspinnatus
ENSSSCG00000035505	YTHDC1	100	95.507	ENSPEMG00000013850	Ythdc1	100	95.574	Peromyscus_maniculatus_bairdii
ENSSSCG00000035505	YTHDC1	92	86.614	ENSPCIG00000006870	YTHDC1	85	85.984	Phascolarctos_cinereus
ENSSSCG00000035505	YTHDC1	61	58.929	ENSPFOG00000013404	ythdc1	60	64.989	Poecilia_formosa
ENSSSCG00000035505	YTHDC1	65	57.895	ENSPLAG00000011079	ythdc1	85	64.989	Poecilia_latipinna
ENSSSCG00000035505	YTHDC1	61	58.929	ENSPMEG00000009238	ythdc1	60	64.989	Poecilia_mexicana
ENSSSCG00000035505	YTHDC1	65	71.429	ENSPREG00000016973	ythdc1	59	59.360	Poecilia_reticulata
ENSSSCG00000035505	YTHDC1	93	95.504	ENSPPYG00000014726	YTHDC1	100	96.703	Pongo_abelii
ENSSSCG00000035505	YTHDC1	78	86.744	ENSPCAG00000009607	YTHDC1	77	86.167	Procavia_capensis
ENSSSCG00000035505	YTHDC1	100	92.713	ENSPCOG00000019105	YTHDC1	100	92.713	Propithecus_coquereli
ENSSSCG00000035505	YTHDC1	100	94.595	ENSPVAG00000015551	YTHDC1	100	94.595	Pteropus_vampyrus
ENSSSCG00000035505	YTHDC1	61	59.685	ENSPNYG00000011687	ythdc1	59	66.133	Pundamilia_nyererei
ENSSSCG00000035505	YTHDC1	93	67.949	ENSPNAG00000028365	ythdc1	85	67.638	Pygocentrus_nattereri
ENSSSCG00000035505	YTHDC1	93	93.149	ENSRNOG00000001996	Ythdc1	93	92.566	Rattus_norvegicus
ENSSSCG00000035505	YTHDC1	100	96.377	ENSRBIG00000028279	YTHDC1	99	94.550	Rhinopithecus_bieti
ENSSSCG00000035505	YTHDC1	100	96.812	ENSRROG00000035028	YTHDC1	99	96.957	Rhinopithecus_roxellana
ENSSSCG00000035505	YTHDC1	100	97.166	ENSSBOG00000022353	YTHDC1	100	97.166	Saimiri_boliviensis_boliviensis
ENSSSCG00000035505	YTHDC1	93	86.443	ENSSHAG00000002538	YTHDC1	91	84.441	Sarcophilus_harrisii
ENSSSCG00000035505	YTHDC1	93	67.806	ENSSFOG00015003298	ythdc1	60	86.256	Scleropages_formosus
ENSSSCG00000035505	YTHDC1	61	59.692	ENSSMAG00000009086	ythdc1	60	65.747	Scophthalmus_maximus
ENSSSCG00000035505	YTHDC1	51	65.957	ENSSDUG00000022008	ythdc1	59	67.048	Seriola_dumerili
ENSSSCG00000035505	YTHDC1	51	65.957	ENSSLDG00000007926	ythdc1	59	67.048	Seriola_lalandi_dorsalis
ENSSSCG00000035505	YTHDC1	85	97.445	ENSSARG00000010960	YTHDC1	100	98.791	Sorex_araneus
ENSSSCG00000035505	YTHDC1	93	80.870	ENSSPUG00000009357	YTHDC1	62	95.724	Sphenodon_punctatus
ENSSSCG00000035505	YTHDC1	61	61.712	ENSSPAG00000011449	ythdc1	59	67.661	Stegastes_partitus
ENSSSCG00000035505	YTHDC1	93	84.279	ENSTGUG00000004452	-	59	96.659	Taeniopygia_guttata
ENSSSCG00000035505	YTHDC1	61	69.231	ENSTRUG00000010142	ythdc1	69	70.000	Takifugu_rubripes
ENSSSCG00000035505	YTHDC1	88	59.873	ENSTNIG00000013243	ythdc1	88	66.279	Tetraodon_nigroviridis
ENSSSCG00000035505	YTHDC1	93	84.840	ENSTBEG00000011546	YTHDC1	85	85.197	Tupaia_belangeri
ENSSSCG00000035505	YTHDC1	100	96.757	ENSTTRG00000005083	YTHDC1	99	97.784	Tursiops_truncatus
ENSSSCG00000035505	YTHDC1	100	96.807	ENSUAMG00000010388	YTHDC1	100	97.944	Ursus_americanus
ENSSSCG00000035505	YTHDC1	100	81.713	ENSUMAG00000013668	YTHDC1	98	83.541	Ursus_maritimus
ENSSSCG00000035505	YTHDC1	100	96.260	ENSVPAG00000009040	YTHDC1	100	96.260	Vicugna_pacos
ENSSSCG00000035505	YTHDC1	100	98.113	ENSVVUG00000005387	YTHDC1	100	98.091	Vulpes_vulpes
ENSSSCG00000035505	YTHDC1	92	72.076	ENSXETG00000017960	ythdc1	91	70.925	Xenopus_tropicalis
ENSSSCG00000035505	YTHDC1	61	58.170	ENSXMAG00000005196	ythdc1	61	64.908	Xiphophorus_maculatus