EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000035547 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 1850 bases
Position: chr15:16156195-16158044
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000054947	RVT_1	PF00078.27	3.4e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000039652	-	1850	-	ENSSSCP00000054947	255 (aa)	-	A0A287BF46

Gene Model

Click here to download ENSSSCG00000035547's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000035547's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000035547	-	100	93.725	ENSSSCG00000033364	-	75	93.725
ENSSSCG00000035547	-	100	78.462	ENSSSCG00000032975	-	72	78.846
ENSSSCG00000035547	-	100	96.471	ENSSSCG00000037695	-	99	96.471
ENSSSCG00000035547	-	100	92.549	ENSSSCG00000034560	-	82	93.878
ENSSSCG00000035547	-	100	76.078	ENSSSCG00000033884	-	73	76.078

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000035547	-	58	88.514	ENSBTAG00000050601	-	58	88.514	Bos_taurus
ENSSSCG00000035547	-	100	81.569	ENSBTAG00000050159	-	90	81.569	Bos_taurus
ENSSSCG00000035547	-	64	70.122	ENSBTAG00000052701	-	99	70.122	Bos_taurus
ENSSSCG00000035547	-	100	82.745	ENSCHIG00000003856	-	84	82.745	Capra_hircus
ENSSSCG00000035547	-	98	83.133	ENSCHIG00000003238	-	97	83.133	Capra_hircus
ENSSSCG00000035547	-	93	63.025	ENSMODG00000027699	-	62	63.025	Monodelphis_domestica
ENSSSCG00000035547	-	100	66.667	ENSMODG00000028140	-	59	66.667	Monodelphis_domestica
ENSSSCG00000035547	-	100	67.451	ENSMODG00000029136	-	95	67.451	Monodelphis_domestica
ENSSSCG00000035547	-	67	72.941	ENSMODG00000028952	-	61	72.941	Monodelphis_domestica
ENSSSCG00000035547	-	100	66.667	ENSMODG00000027429	-	74	66.667	Monodelphis_domestica
ENSSSCG00000035547	-	80	65.854	ENSMODG00000029222	-	65	65.854	Monodelphis_domestica
ENSSSCG00000035547	-	100	66.667	ENSMODG00000028668	-	71	66.667	Monodelphis_domestica
ENSSSCG00000035547	-	100	66.667	ENSMODG00000029044	-	57	66.667	Monodelphis_domestica
ENSSSCG00000035547	-	58	72.973	ENSMODG00000029252	-	56	72.973	Monodelphis_domestica
ENSSSCG00000035547	-	94	67.500	ENSMODG00000028124	-	54	67.500	Monodelphis_domestica
ENSSSCG00000035547	-	100	67.451	ENSMODG00000028405	-	97	67.451	Monodelphis_domestica
ENSSSCG00000035547	-	67	71.176	ENSMODG00000028404	-	72	71.176	Monodelphis_domestica
ENSSSCG00000035547	-	100	66.275	ENSMODG00000027618	-	84	66.275	Monodelphis_domestica
ENSSSCG00000035547	-	67	71.765	ENSMODG00000029287	-	52	71.765	Monodelphis_domestica
ENSSSCG00000035547	-	71	66.851	ENSMODG00000027313	-	62	66.851	Monodelphis_domestica
ENSSSCG00000035547	-	100	67.451	ENSMODG00000029510	-	65	67.451	Monodelphis_domestica
ENSSSCG00000035547	-	79	66.832	ENSMODG00000027438	-	65	66.832	Monodelphis_domestica
ENSSSCG00000035547	-	100	67.059	ENSMODG00000027411	-	51	67.059	Monodelphis_domestica
ENSSSCG00000035547	-	84	66.512	ENSMODG00000028726	-	66	66.512	Monodelphis_domestica
ENSSSCG00000035547	-	67	73.529	ENSMODG00000028182	-	64	73.529	Monodelphis_domestica
ENSSSCG00000035547	-	100	67.059	ENSMODG00000029442	-	50	67.059	Monodelphis_domestica
ENSSSCG00000035547	-	67	74.118	ENSMODG00000028222	-	53	74.118	Monodelphis_domestica
ENSSSCG00000035547	-	100	67.451	ENSMODG00000029295	-	89	67.451	Monodelphis_domestica
ENSSSCG00000035547	-	100	67.059	ENSMODG00000029486	-	68	67.059	Monodelphis_domestica
ENSSSCG00000035547	-	100	66.667	ENSMODG00000028501	-	97	66.667	Monodelphis_domestica
ENSSSCG00000035547	-	74	66.667	ENSMODG00000028136	-	63	66.667	Monodelphis_domestica
ENSSSCG00000035547	-	100	67.059	ENSMODG00000027410	-	66	67.059	Monodelphis_domestica
ENSSSCG00000035547	-	76	66.154	ENSMODG00000027519	-	64	66.154	Monodelphis_domestica
ENSSSCG00000035547	-	89	65.487	ENSMODG00000027304	-	67	65.487	Monodelphis_domestica
ENSSSCG00000035547	-	100	66.667	ENSMODG00000028162	-	55	66.667	Monodelphis_domestica
ENSSSCG00000035547	-	100	65.882	ENSMODG00000029766	-	81	65.882	Monodelphis_domestica
ENSSSCG00000035547	-	100	67.451	ENSMODG00000027686	-	86	67.451	Monodelphis_domestica
ENSSSCG00000035547	-	91	66.234	ENSMODG00000027682	-	53	66.234	Monodelphis_domestica
ENSSSCG00000035547	-	95	66.390	ENSMODG00000028037	-	54	66.390	Monodelphis_domestica
ENSSSCG00000035547	-	100	67.059	ENSMODG00000027479	-	89	67.059	Monodelphis_domestica
ENSSSCG00000035547	-	67	72.353	ENSMODG00000028166	-	65	72.353	Monodelphis_domestica
ENSSSCG00000035547	-	67	74.706	ENSMODG00000028460	-	50	74.706	Monodelphis_domestica
ENSSSCG00000035547	-	100	67.451	ENSMODG00000028759	-	51	67.451	Monodelphis_domestica
ENSSSCG00000035547	-	100	66.275	ENSMODG00000029459	-	62	66.275	Monodelphis_domestica
ENSSSCG00000035547	-	85	66.820	ENSMODG00000029028	-	50	66.820	Monodelphis_domestica
ENSSSCG00000035547	-	100	67.059	ENSMODG00000027853	-	64	67.059	Monodelphis_domestica
ENSSSCG00000035547	-	84	66.977	ENSMODG00000027816	-	51	66.977	Monodelphis_domestica
ENSSSCG00000035547	-	67	74.706	ENSMODG00000027747	-	57	74.706	Monodelphis_domestica
ENSSSCG00000035547	-	100	60.392	ENSMODG00000028024	-	89	60.392	Monodelphis_domestica
ENSSSCG00000035547	-	100	67.059	ENSMODG00000028674	-	62	67.059	Monodelphis_domestica
ENSSSCG00000035547	-	78	66.834	ENSMODG00000029686	-	53	66.834	Monodelphis_domestica
ENSSSCG00000035547	-	71	66.667	ENSMODG00000029620	-	62	66.667	Monodelphis_domestica
ENSSSCG00000035547	-	98	66.667	ENSMODG00000029352	-	54	66.667	Monodelphis_domestica
ENSSSCG00000035547	-	100	64.706	ENSMODG00000028322	-	62	64.706	Monodelphis_domestica
ENSSSCG00000035547	-	77	66.837	ENSMODG00000027714	-	64	66.837	Monodelphis_domestica
ENSSSCG00000035547	-	86	66.818	ENSMODG00000028630	-	66	66.818	Monodelphis_domestica
ENSSSCG00000035547	-	70	67.039	ENSMODG00000028840	-	62	67.039	Monodelphis_domestica
ENSSSCG00000035547	-	77	66.837	ENSMODG00000027650	-	50	66.837	Monodelphis_domestica
ENSSSCG00000035547	-	100	62.745	ENSMODG00000029521	-	92	62.745	Monodelphis_domestica
ENSSSCG00000035547	-	100	67.451	ENSMODG00000029176	-	71	67.451	Monodelphis_domestica
ENSSSCG00000035547	-	100	67.059	ENSMODG00000028890	-	73	67.059	Monodelphis_domestica
ENSSSCG00000035547	-	87	66.816	ENSMODG00000029633	-	52	66.816	Monodelphis_domestica
ENSSSCG00000035547	-	100	67.059	ENSMODG00000029634	-	79	67.059	Monodelphis_domestica
ENSSSCG00000035547	-	100	64.706	ENSMODG00000028615	-	60	64.706	Monodelphis_domestica
ENSSSCG00000035547	-	100	67.059	ENSMODG00000028948	-	76	67.059	Monodelphis_domestica
ENSSSCG00000035547	-	100	65.098	ENSMODG00000029714	-	69	65.098	Monodelphis_domestica
ENSSSCG00000035547	-	100	67.451	ENSMODG00000029460	-	68	67.451	Monodelphis_domestica
ENSSSCG00000035547	-	67	72.353	ENSMODG00000029469	-	58	72.353	Monodelphis_domestica
ENSSSCG00000035547	-	100	65.882	ENSMODG00000028209	-	76	65.882	Monodelphis_domestica
ENSSSCG00000035547	-	93	66.949	ENSMODG00000027534	-	53	66.949	Monodelphis_domestica
ENSSSCG00000035547	-	100	65.490	ENSMODG00000027530	-	58	65.490	Monodelphis_domestica
ENSSSCG00000035547	-	92	66.809	ENSMODG00000028411	-	68	66.809	Monodelphis_domestica
ENSSSCG00000035547	-	100	80.000	ENSMPUG00000018641	-	85	80.000	Mustela_putorius_furo
ENSSSCG00000035547	-	100	71.765	ENSNLEG00000027825	-	66	71.765	Nomascus_leucogenys
ENSSSCG00000035547	-	84	68.837	ENSPCIG00000002267	-	68	68.837	Phascolarctos_cinereus
ENSSSCG00000035547	-	100	61.569	ENSPCIG00000009071	-	99	61.569	Phascolarctos_cinereus
ENSSSCG00000035547	-	90	63.319	ENSUAMG00000014636	-	100	63.319	Ursus_americanus