EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000035570 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein L
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 11945 bases
Position: chr6:47643566-47655510
Accession: 102163392
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000026125	RRM_5	PF13893.6	1.8e-08	1	1
ENSSSCP00000044313	RRM_5	PF13893.6	2e-08	1	1
ENSSSCP00000044838	RRM_5	PF13893.6	2e-08	1	1
ENSSSCP00000026125	RRM_1	PF00076.22	1.5e-16	1	2
ENSSSCP00000026125	RRM_1	PF00076.22	1.5e-16	2	2
ENSSSCP00000044313	RRM_1	PF00076.22	1.5e-16	1	2
ENSSSCP00000044313	RRM_1	PF00076.22	1.5e-16	2	2
ENSSSCP00000044838	RRM_1	PF00076.22	1.5e-16	1	2
ENSSSCP00000044838	RRM_1	PF00076.22	1.5e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000031006	-	3275	-	ENSSSCP00000026125	278 (aa)	-	I3LPU8
ENSSSCT00000064445	-	7190	-	ENSSSCP00000044838	281 (aa)	-	A0A287AJX7
ENSSSCT00000061924	-	6615	XM_021094349	ENSSSCP00000044313	281 (aa)	XP_020950008	A0A287AJX7

Gene Model

Click here to download ENSSSCG00000035570's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000035570's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000035570	-	76	62.844	ENSSSCG00000020878	HNRNPLL	68	66.332

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000035570	-	90	55.849	ENSG00000143889	HNRNPLL	95	63.830	Homo_sapiens
ENSSSCG00000035570	-	94	98.099	ENSG00000104824	HNRNPL	100	100.000	Homo_sapiens
ENSSSCG00000035570	-	93	72.453	ENSACIG00000004909	hnrnpl	58	78.889	Amphilophus_citrinellus
ENSSSCG00000035570	-	76	58.019	ENSAOCG00000024299	-	79	58.019	Amphiprion_ocellaris
ENSSSCG00000035570	-	94	81.923	ENSANAG00000027695	-	82	81.679	Aotus_nancymaae
ENSSSCG00000035570	-	92	53.791	ENSANAG00000034951	HNRNPLL	71	65.829	Aotus_nancymaae
ENSSSCG00000035570	-	64	30.332	ENSANAG00000020883	-	70	30.213	Aotus_nancymaae
ENSSSCG00000035570	-	75	59.809	ENSAMXG00000007014	-	79	59.809	Astyanax_mexicanus
ENSSSCG00000035570	-	73	31.624	ENSAMXG00000000378	ptbp2b	51	30.769	Astyanax_mexicanus
ENSSSCG00000035570	-	71	50.761	WBGene00016624	C44B7.2	58	50.761	Caenorhabditis_elegans
ENSSSCG00000035570	-	100	96.809	ENSCJAG00000013931	-	100	96.809	Callithrix_jacchus
ENSSSCG00000035570	-	77	30.159	ENSCJAG00000020162	-	51	30.638	Callithrix_jacchus
ENSSSCG00000035570	-	92	54.874	ENSCJAG00000004088	HNRNPLL	70	63.819	Callithrix_jacchus
ENSSSCG00000035570	-	76	62.844	ENSCAFG00020022813	HNRNPLL	67	66.332	Canis_lupus_dingo
ENSSSCG00000035570	-	94	96.970	ENSCAFG00020017321	-	88	95.941	Canis_lupus_dingo
ENSSSCG00000035570	-	88	56.641	ENSCPOG00000007588	HNRNPLL	71	66.332	Cavia_porcellus
ENSSSCG00000035570	-	92	52.857	ENSCCAG00000028404	HNRNPLL	71	65.327	Cebus_capucinus
ENSSSCG00000035570	-	64	31.068	ENSCCAG00000036365	-	72	30.435	Cebus_capucinus
ENSSSCG00000035570	-	77	30.159	ENSCCAG00000025811	-	77	30.638	Cebus_capucinus
ENSSSCG00000035570	-	88	56.420	ENSCATG00000023374	HNRNPLL	71	65.327	Cercocebus_atys
ENSSSCG00000035570	-	68	31.863	ENSCSAVG00000007421	-	52	31.863	Ciona_savignyi
ENSSSCG00000035570	-	76	30.000	ENSCANG00000038259	PTBP1	78	30.638	Colobus_angolensis_palliatus
ENSSSCG00000035570	-	88	56.420	ENSCANG00000033628	HNRNPLL	71	65.327	Colobus_angolensis_palliatus
ENSSSCG00000035570	-	94	74.242	ENSDARG00000035324	hnrnpl	77	83.962	Danio_rerio
ENSSSCG00000035570	-	71	46.465	ENSDARG00000116101	CABZ01100304.1	79	46.465	Danio_rerio
ENSSSCG00000035570	-	76	61.468	ENSDORG00000008609	Hnrnpll	70	64.824	Dipodomys_ordii
ENSSSCG00000035570	-	76	67.606	ENSEBUG00000003580	-	90	67.606	Eptatretus_burgeri
ENSSSCG00000035570	-	60	64.072	ENSEBUG00000002973	-	77	64.072	Eptatretus_burgeri
ENSSSCG00000035570	-	81	30.116	ENSEASG00005021525	-	66	30.638	Equus_asinus_asinus
ENSSSCG00000035570	-	87	56.589	ENSECAG00000018354	HNRNPLL	68	66.332	Equus_caballus
ENSSSCG00000035570	-	63	85.714	ENSFHEG00000017462	-	92	88.166	Fundulus_heteroclitus
ENSSSCG00000035570	-	63	85.714	ENSFHEG00000017940	-	84	88.166	Fundulus_heteroclitus
ENSSSCG00000035570	-	73	96.098	ENSGALG00000043929	-	69	95.631	Gallus_gallus
ENSSSCG00000035570	-	64	97.765	ENSGAGG00000008378	-	100	97.765	Gopherus_agassizii
ENSSSCG00000035570	-	88	56.420	ENSGGOG00000003456	HNRNPLL	71	65.327	Gorilla_gorilla
ENSSSCG00000035570	-	73	60.099	ENSHBUG00000003120	HNRNPLL	76	59.804	Haplochromis_burtoni
ENSSSCG00000035570	-	94	69.466	ENSHCOG00000016116	hnrnpl2	77	61.314	Hippocampus_comes
ENSSSCG00000035570	-	76	30.290	ENSIPUG00000019002	ptbp2b	51	30.769	Ictalurus_punctatus
ENSSSCG00000035570	-	76	62.100	ENSJJAG00000024192	Hnrnpll	69	65.500	Jaculus_jaculus
ENSSSCG00000035570	-	78	94.064	ENSLAFG00000025536	HNRNPL	86	94.686	Loxodonta_africana
ENSSSCG00000035570	-	88	56.420	ENSMMUG00000002338	HNRNPLL	71	65.327	Macaca_mulatta
ENSSSCG00000035570	-	76	30.000	ENSMNEG00000028851	PTBP1	81	30.638	Macaca_nemestrina
ENSSSCG00000035570	-	94	98.099	ENSMNEG00000039542	-	100	96.667	Macaca_nemestrina
ENSSSCG00000035570	-	88	56.420	ENSMLEG00000031558	HNRNPLL	71	65.327	Mandrillus_leucophaeus
ENSSSCG00000035570	-	76	62.844	ENSMICG00000013155	HNRNPLL	72	66.332	Microcebus_murinus
ENSSSCG00000035570	-	73	31.064	ENSMICG00000007131	PTBP1	73	30.638	Microcebus_murinus
ENSSSCG00000035570	-	71	61.000	ENSMMOG00000018608	HNRNPLL	70	61.026	Mola_mola
ENSSSCG00000035570	-	94	98.846	MGP_CAROLIEiJ_G0029463	Hnrnpl	100	100.000	Mus_caroli
ENSSSCG00000035570	-	79	62.115	MGP_CAROLIEiJ_G0021900	Hnrnpll	58	66.332	Mus_caroli
ENSSSCG00000035570	-	64	30.806	MGP_CAROLIEiJ_G0015545	Ptbp1	67	30.213	Mus_caroli
ENSSSCG00000035570	-	79	62.115	ENSMUSG00000024095	Hnrnpll	60	66.332	Mus_musculus
ENSSSCG00000035570	-	94	98.846	ENSMUSG00000015165	Hnrnpl	100	100.000	Mus_musculus
ENSSSCG00000035570	-	64	30.806	ENSMUSG00000006498	Ptbp1	67	30.213	Mus_musculus
ENSSSCG00000035570	-	79	62.115	MGP_PahariEiJ_G0020889	Hnrnpll	59	66.332	Mus_pahari
ENSSSCG00000035570	-	94	98.846	MGP_PahariEiJ_G0012697	Hnrnpl	100	100.000	Mus_pahari
ENSSSCG00000035570	-	79	62.115	MGP_SPRETEiJ_G0022815	Hnrnpll	60	66.332	Mus_spretus
ENSSSCG00000035570	-	94	98.846	MGP_SPRETEiJ_G0030559	Hnrnpl	100	100.000	Mus_spretus
ENSSSCG00000035570	-	59	63.804	ENSNBRG00000024244	HNRNPLL	100	62.130	Neolamprologus_brichardi
ENSSSCG00000035570	-	74	53.670	ENSODEG00000012905	-	54	53.211	Octodon_degus
ENSSSCG00000035570	-	56	50.595	ENSOANG00000031200	-	66	57.377	Ornithorhynchus_anatinus
ENSSSCG00000035570	-	77	30.544	ENSORLG00020001452	PTBP1	61	32.110	Oryzias_latipes_hni
ENSSSCG00000035570	-	77	30.544	ENSORLG00015020649	PTBP1	61	32.110	Oryzias_latipes_hsok
ENSSSCG00000035570	-	62	69.006	ENSOMEG00000012688	-	89	71.141	Oryzias_melastigma
ENSSSCG00000035570	-	82	30.040	ENSPTIG00000012325	-	75	31.304	Panthera_tigris_altaica
ENSSSCG00000035570	-	88	56.420	ENSPANG00000015805	HNRNPLL	71	65.327	Papio_anubis
ENSSSCG00000035570	-	100	95.105	ENSPCIG00000010541	-	84	95.105	Phascolarctos_cinereus
ENSSSCG00000035570	-	76	61.086	ENSPCIG00000020489	HNRNPLL	63	64.356	Phascolarctos_cinereus
ENSSSCG00000035570	-	77	30.342	ENSPREG00000015110	-	61	31.944	Poecilia_reticulata
ENSSSCG00000035570	-	92	52.878	ENSPCOG00000025638	HNRNPLL	69	62.814	Propithecus_coquereli
ENSSSCG00000035570	-	81	31.048	ENSPNYG00000005088	-	71	33.028	Pundamilia_nyererei
ENSSSCG00000035570	-	75	31.535	ENSPNYG00000012610	-	50	31.535	Pundamilia_nyererei
ENSSSCG00000035570	-	59	63.804	ENSPNYG00000009070	-	100	62.130	Pundamilia_nyererei
ENSSSCG00000035570	-	79	30.924	ENSPNAG00000011818	ptbp1a	50	30.279	Pygocentrus_nattereri
ENSSSCG00000035570	-	76	30.000	ENSRBIG00000044228	PTBP1	78	30.638	Rhinopithecus_bieti
ENSSSCG00000035570	-	76	30.000	ENSRROG00000016534	PTBP1	78	30.638	Rhinopithecus_roxellana
ENSSSCG00000035570	-	88	56.420	ENSSBOG00000025720	HNRNPLL	71	65.327	Saimiri_boliviensis_boliviensis
ENSSSCG00000035570	-	82	56.332	ENSSLDG00000017942	-	77	58.371	Seriola_lalandi_dorsalis
ENSSSCG00000035570	-	79	57.273	ENSSPAG00000020833	-	83	61.084	Stegastes_partitus
ENSSSCG00000035570	-	76	31.707	ENSSPAG00000006393	-	51	31.707	Stegastes_partitus
ENSSSCG00000035570	-	65	61.667	ENSTRUG00000000830	-	75	61.667	Takifugu_rubripes
ENSSSCG00000035570	-	82	59.402	ENSUAMG00000024895	HNRNPLL	65	65.000	Ursus_americanus
ENSSSCG00000035570	-	73	31.718	ENSUMAG00000005280	-	69	30.579	Ursus_maritimus
ENSSSCG00000035570	-	94	96.591	ENSVVUG00000006478	-	88	95.572	Vulpes_vulpes
ENSSSCG00000035570	-	76	62.844	ENSVVUG00000018784	HNRNPLL	67	66.332	Vulpes_vulpes
ENSSSCG00000035570	-	90	75.600	ENSXCOG00000009196	hnrnpl2	66	76.852	Xiphophorus_couchianus
ENSSSCG00000035570	-	73	60.000	ENSXCOG00000011252	-	62	54.545	Xiphophorus_couchianus