EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000035613 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 3629 bases
Position: chr5:78060687-78064315
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000053933	MRP-S32	PF10210.9	3.9e-28	1	1
ENSSSCP00000049812	MRP-S32	PF10210.9	5.6e-28	1	1
ENSSSCP00000056044	MRP-S32	PF10210.9	7e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000059492	-	327	-	ENSSSCP00000056044	108 (aa)	-	A0A287BIS5
ENSSSCT00000063377	-	327	-	ENSSSCP00000053933	108 (aa)	-	A0A287BC56
ENSSSCT00000038225	-	369	-	ENSSSCP00000049812	122 (aa)	-	A0A287B0X9

Gene Model

Click here to download ENSSSCG00000035613's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000035613's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000035613	-	90	43.564	ENSSSCG00000034693	-	69	47.674
ENSSSCG00000035613	-	80	86.047	ENSSSCG00000030478	-	81	70.175
ENSSSCG00000035613	-	92	45.536	ENSSSCG00000036897	-	72	45.536

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000035613	-	80	79.070	ENSG00000198015	MRPL42	61	79.070	Homo_sapiens
ENSSSCG00000035613	-	67	80.556	ENSAMEG00000009832	MRPL42	73	64.646	Ailuropoda_melanoleuca
ENSSSCG00000035613	-	99	44.628	ENSACIG00000017826	mrpl42	81	44.628	Amphilophus_citrinellus
ENSSSCG00000035613	-	98	51.639	ENSAPLG00000015057	MRPL42	85	51.639	Anas_platyrhynchos
ENSSSCG00000035613	-	86	56.863	ENSANAG00000033101	-	59	61.798	Aotus_nancymaae
ENSSSCG00000035613	-	50	63.793	ENSANAG00000036083	-	55	54.930	Aotus_nancymaae
ENSSSCG00000035613	-	76	61.628	ENSANAG00000000692	-	52	68.493	Aotus_nancymaae
ENSSSCG00000035613	-	88	69.697	ENSANAG00000036935	-	60	76.744	Aotus_nancymaae
ENSSSCG00000035613	-	91	64.286	ENSBTAG00000052971	-	88	64.286	Bos_taurus
ENSSSCG00000035613	-	100	63.934	ENSBTAG00000002708	MRPL42	82	63.934	Bos_taurus
ENSSSCG00000035613	-	100	58.197	ENSCJAG00000046971	MRPL42	61	76.744	Callithrix_jacchus
ENSSSCG00000035613	-	100	67.593	ENSCAFG00020022967	-	98	63.393	Canis_lupus_dingo
ENSSSCG00000035613	-	67	84.722	ENSCHIG00000014921	MRPL42	73	68.000	Capra_hircus
ENSSSCG00000035613	-	88	70.707	ENSTSYG00000006370	-	61	77.907	Carlito_syrichta
ENSSSCG00000035613	-	78	69.318	ENSTSYG00000036466	-	51	77.333	Carlito_syrichta
ENSSSCG00000035613	-	94	67.290	ENSTSYG00000032810	-	98	67.290	Carlito_syrichta
ENSSSCG00000035613	-	88	67.677	ENSCAPG00000016985	-	80	61.947	Cavia_aperea
ENSSSCG00000035613	-	57	70.968	ENSCAPG00000015105	-	51	69.841	Cavia_aperea
ENSSSCG00000035613	-	57	70.968	ENSCPOG00000008943	-	51	69.841	Cavia_porcellus
ENSSSCG00000035613	-	88	68.687	ENSCPOG00000030015	-	75	62.281	Cavia_porcellus
ENSSSCG00000035613	-	56	72.131	ENSCCAG00000029290	-	64	72.131	Cebus_capucinus
ENSSSCG00000035613	-	88	70.707	ENSCCAG00000031179	-	61	77.907	Cebus_capucinus
ENSSSCG00000035613	-	80	77.907	ENSCATG00000037616	MRPL42	61	77.907	Cercocebus_atys
ENSSSCG00000035613	-	88	70.707	ENSCLAG00000005421	MRPL42	60	77.907	Chinchilla_lanigera
ENSSSCG00000035613	-	80	79.070	ENSCSAG00000003706	MRPL42	61	79.070	Chlorocebus_sabaeus
ENSSSCG00000035613	-	88	60.606	ENSCPBG00000001581	MRPL42	59	66.279	Chrysemys_picta_bellii
ENSSSCG00000035613	-	80	77.907	ENSCANG00000033457	MRPL42	61	77.907	Colobus_angolensis_palliatus
ENSSSCG00000035613	-	88	52.525	ENSCGRG00001003813	-	58	58.140	Cricetulus_griseus_chok1gshd
ENSSSCG00000035613	-	88	64.646	ENSCGRG00001012694	-	74	59.292	Cricetulus_griseus_chok1gshd
ENSSSCG00000035613	-	88	64.646	ENSCGRG00000003801	Mrpl42	76	59.292	Cricetulus_griseus_crigri
ENSSSCG00000035613	-	88	70.707	ENSDNOG00000032710	-	61	76.744	Dasypus_novemcinctus
ENSSSCG00000035613	-	67	80.556	ENSDNOG00000049701	-	51	80.556	Dasypus_novemcinctus
ENSSSCG00000035613	-	100	59.836	ENSDORG00000015571	Mrpl42	82	59.836	Dipodomys_ordii
ENSSSCG00000035613	-	56	72.581	ENSETEG00000014745	-	52	74.286	Echinops_telfairi
ENSSSCG00000035613	-	100	60.656	ENSEASG00005019361	MRPL42	82	60.656	Equus_asinus_asinus
ENSSSCG00000035613	-	88	71.717	ENSECAG00000026888	MRPL42	76	64.912	Equus_caballus
ENSSSCG00000035613	-	80	73.256	ENSFCAG00000040567	-	69	73.256	Felis_catus
ENSSSCG00000035613	-	74	67.500	ENSFCAG00000036356	-	68	59.000	Felis_catus
ENSSSCG00000035613	-	88	70.707	ENSFCAG00000037907	-	61	77.907	Felis_catus
ENSSSCG00000035613	-	88	58.586	ENSFALG00000010717	MRPL42	59	63.953	Ficedula_albicollis
ENSSSCG00000035613	-	88	69.697	ENSFDAG00000018129	MRPL42	77	63.158	Fukomys_damarensis
ENSSSCG00000035613	-	88	55.556	ENSGALG00000011293	MRPL42	59	60.465	Gallus_gallus
ENSSSCG00000035613	-	88	60.606	ENSGAGG00000010125	MRPL42	59	66.279	Gopherus_agassizii
ENSSSCG00000035613	-	80	79.070	ENSGGOG00000022760	MRPL42	61	79.070	Gorilla_gorilla
ENSSSCG00000035613	-	66	81.690	ENSHGLG00000007399	-	52	81.690	Heterocephalus_glaber_female
ENSSSCG00000035613	-	70	71.053	ENSHGLG00000008248	-	72	62.766	Heterocephalus_glaber_female
ENSSSCG00000035613	-	66	81.690	ENSHGLG00100018317	-	50	81.690	Heterocephalus_glaber_male
ENSSSCG00000035613	-	69	70.270	ENSHGLG00100013257	-	70	61.957	Heterocephalus_glaber_male
ENSSSCG00000035613	-	88	68.687	ENSSTOG00000026544	MRPL42	61	75.581	Ictidomys_tridecemlineatus
ENSSSCG00000035613	-	93	51.327	ENSLACG00000006919	MRPL42	76	51.327	Latimeria_chalumnae
ENSSSCG00000035613	-	88	70.707	ENSLAFG00000013779	MRPL42	76	64.602	Loxodonta_africana
ENSSSCG00000035613	-	80	76.744	ENSMFAG00000032330	MRPL42	61	76.744	Macaca_fascicularis
ENSSSCG00000035613	-	88	66.667	ENSMMUG00000016805	MRPL42	60	74.419	Macaca_mulatta
ENSSSCG00000035613	-	80	76.744	ENSMNEG00000028853	MRPL42	61	76.744	Macaca_nemestrina
ENSSSCG00000035613	-	80	77.907	ENSMLEG00000038104	MRPL42	61	77.907	Mandrillus_leucophaeus
ENSSSCG00000035613	-	88	55.556	ENSMGAG00000011346	MRPL42	59	60.465	Meleagris_gallopavo
ENSSSCG00000035613	-	86	59.794	ENSMAUG00000018130	-	72	65.116	Mesocricetus_auratus
ENSSSCG00000035613	-	93	51.754	ENSMAUG00000010057	-	76	51.754	Mesocricetus_auratus
ENSSSCG00000035613	-	88	68.687	ENSMICG00000032596	-	75	62.832	Microcebus_murinus
ENSSSCG00000035613	-	69	78.378	ENSMICG00000035189	-	51	78.378	Microcebus_murinus
ENSSSCG00000035613	-	99	65.421	ENSMICG00000028094	-	93	65.421	Microcebus_murinus
ENSSSCG00000035613	-	87	67.347	ENSMICG00000045594	-	85	76.190	Microcebus_murinus
ENSSSCG00000035613	-	80	75.581	ENSMICG00000036541	-	80	75.581	Microcebus_murinus
ENSSSCG00000035613	-	88	65.657	ENSMOCG00000013541	-	61	72.093	Microtus_ochrogaster
ENSSSCG00000035613	-	93	53.097	ENSMOCG00000004616	-	75	53.097	Microtus_ochrogaster
ENSSSCG00000035613	-	88	61.000	MGP_CAROLIEiJ_G0015750	Mrpl42	61	67.816	Mus_caroli
ENSSSCG00000035613	-	88	59.000	ENSMUSG00000062981	Mrpl42	61	66.667	Mus_musculus
ENSSSCG00000035613	-	100	59.016	ENSMLUG00000029623	-	82	59.016	Myotis_lucifugus
ENSSSCG00000035613	-	99	58.678	ENSMLUG00000025058	-	81	58.678	Myotis_lucifugus
ENSSSCG00000035613	-	88	65.657	ENSMLUG00000023702	-	60	72.093	Myotis_lucifugus
ENSSSCG00000035613	-	67	81.944	ENSNGAG00000000717	Mrpl42	56	81.944	Nannospalax_galili
ENSSSCG00000035613	-	80	79.070	ENSNLEG00000005699	MRPL42	61	79.070	Nomascus_leucogenys
ENSSSCG00000035613	-	80	77.907	ENSOPRG00000010967	MRPL42	77	64.035	Ochotona_princeps
ENSSSCG00000035613	-	88	62.000	ENSODEG00000012689	-	76	57.391	Octodon_degus
ENSSSCG00000035613	-	80	72.414	ENSODEG00000016452	-	64	73.563	Octodon_degus
ENSSSCG00000035613	-	98	60.000	ENSODEG00000008681	-	96	60.000	Octodon_degus
ENSSSCG00000035613	-	88	66.667	ENSOCUG00000010928	MRPL42	61	73.256	Oryctolagus_cuniculus
ENSSSCG00000035613	-	88	64.211	ENSOGAG00000027617	-	75	58.407	Otolemur_garnettii
ENSSSCG00000035613	-	88	65.657	ENSOGAG00000025686	-	75	60.177	Otolemur_garnettii
ENSSSCG00000035613	-	88	62.626	ENSOGAG00000024156	-	59	69.048	Otolemur_garnettii
ENSSSCG00000035613	-	88	67.368	ENSOGAG00000034004	-	66	67.368	Otolemur_garnettii
ENSSSCG00000035613	-	88	66.667	ENSOGAG00000025600	-	76	60.526	Otolemur_garnettii
ENSSSCG00000035613	-	89	66.000	ENSOGAG00000030438	-	79	61.062	Otolemur_garnettii
ENSSSCG00000035613	-	93	53.982	ENSOGAG00000026395	-	75	53.982	Otolemur_garnettii
ENSSSCG00000035613	-	67	84.722	ENSOARG00000015849	MRPL42	73	68.000	Ovis_aries
ENSSSCG00000035613	-	80	79.070	ENSPPAG00000038254	MRPL42	61	79.070	Pan_paniscus
ENSSSCG00000035613	-	88	70.707	ENSPPRG00000013218	-	61	77.907	Panthera_pardus
ENSSSCG00000035613	-	88	69.697	ENSPPRG00000015755	-	61	76.744	Panthera_pardus
ENSSSCG00000035613	-	80	72.093	ENSPPRG00000017935	-	69	72.093	Panthera_pardus
ENSSSCG00000035613	-	88	68.687	ENSPTIG00000009394	-	61	75.581	Panthera_tigris_altaica
ENSSSCG00000035613	-	88	70.707	ENSPTIG00000019099	-	61	77.907	Panthera_tigris_altaica
ENSSSCG00000035613	-	80	72.093	ENSPTIG00000009717	-	82	60.550	Panthera_tigris_altaica
ENSSSCG00000035613	-	80	79.070	ENSPTRG00000022791	MRPL42	61	79.070	Pan_troglodytes
ENSSSCG00000035613	-	96	64.286	ENSPANG00000030179	MRPL42	93	66.981	Papio_anubis
ENSSSCG00000035613	-	88	59.596	ENSPSIG00000010745	MRPL42	59	65.116	Pelodiscus_sinensis
ENSSSCG00000035613	-	88	63.636	ENSPEMG00000020562	-	76	58.407	Peromyscus_maniculatus_bairdii
ENSSSCG00000035613	-	80	79.070	ENSPPYG00000004833	MRPL42	61	79.070	Pongo_abelii
ENSSSCG00000035613	-	84	70.526	ENSPCAG00000003791	MRPL42	89	63.636	Procavia_capensis
ENSSSCG00000035613	-	93	44.737	ENSPCOG00000018896	-	71	44.737	Propithecus_coquereli
ENSSSCG00000035613	-	88	63.636	ENSPCOG00000025008	-	76	54.783	Propithecus_coquereli
ENSSSCG00000035613	-	66	83.099	ENSPCOG00000014986	-	51	83.099	Propithecus_coquereli
ENSSSCG00000035613	-	72	53.659	ENSPVAG00000013736	-	60	59.155	Pteropus_vampyrus
ENSSSCG00000035613	-	74	68.750	ENSRNOG00000021867	AABR07009508.1	56	68.750	Rattus_norvegicus
ENSSSCG00000035613	-	88	63.636	ENSRNOG00000042740	Mrpl42	76	58.407	Rattus_norvegicus
ENSSSCG00000035613	-	88	67.677	ENSRBIG00000011046	-	61	75.581	Rhinopithecus_bieti
ENSSSCG00000035613	-	80	77.907	ENSRROG00000033949	MRPL42	61	77.907	Rhinopithecus_roxellana
ENSSSCG00000035613	-	80	69.767	ENSSBOG00000027483	-	75	69.767	Saimiri_boliviensis_boliviensis
ENSSSCG00000035613	-	64	73.913	ENSSBOG00000025086	-	78	73.913	Saimiri_boliviensis_boliviensis
ENSSSCG00000035613	-	88	67.677	ENSSBOG00000009656	-	61	74.419	Saimiri_boliviensis_boliviensis
ENSSSCG00000035613	-	92	50.893	ENSSFOG00015006975	mrpl42	73	50.893	Scleropages_formosus
ENSSSCG00000035613	-	97	50.847	ENSSPUG00000015009	-	75	50.847	Sphenodon_punctatus
ENSSSCG00000035613	-	75	54.118	ENSSPAG00000013637	mrpl42	56	59.722	Stegastes_partitus
ENSSSCG00000035613	-	88	58.586	ENSTGUG00000008272	MRPL42	75	63.636	Taeniopygia_guttata
ENSSSCG00000035613	-	75	48.193	ENSTNIG00000018478	mrpl42	55	54.167	Tetraodon_nigroviridis
ENSSSCG00000035613	-	88	73.737	ENSTTRG00000003312	MRPL42	80	67.257	Tursiops_truncatus
ENSSSCG00000035613	-	100	60.656	ENSUAMG00000025405	-	87	60.656	Ursus_americanus
ENSSSCG00000035613	-	88	71.717	ENSUMAG00000003107	-	75	65.487	Ursus_maritimus
ENSSSCG00000035613	-	86	58.163	ENSUMAG00000014643	-	52	65.060	Ursus_maritimus
ENSSSCG00000035613	-	100	62.295	ENSVPAG00000007658	MRPL42	99	62.295	Vicugna_pacos
ENSSSCG00000035613	-	100	59.016	ENSVVUG00000011842	-	82	59.016	Vulpes_vulpes
ENSSSCG00000035613	-	86	49.485	ENSXMAG00000004057	mrpl42	65	53.488	Xiphophorus_maculatus