EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000035690 (Gene tree)
Gene ID: 110261143
Gene Symbol: SFPQ
Alias: PPP1R140|PSF
Full Name: splicing factor proline and glutamine rich
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 18443 bases
Position: chr6:91389859-91408301
Accession: 110261143
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000055130	RRM_1	PF00076.22	4.5e-30	1	2
ENSSSCP00000055130	RRM_1	PF00076.22	4.5e-30	2	2
ENSSSCP00000059099	RRM_1	PF00076.22	4.5e-30	1	2
ENSSSCP00000059099	RRM_1	PF00076.22	4.5e-30	2	2
ENSSSCP00000038653	RRM_1	PF00076.22	5.2e-30	1	2
ENSSSCP00000038653	RRM_1	PF00076.22	5.2e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000060562	SFPQ-201	5172	XM_021095898	ENSSSCP00000055130	664 (aa)	XP_020951557	A0A287BRG3
ENSSSCT00000043368	SFPQ-203	5293	XM_021095897	ENSSSCP00000038653	702 (aa)	XP_020951556	A0A287A4F2
ENSSSCT00000045859	SFPQ-202	2283	-	ENSSSCP00000059099	664 (aa)	-	A0A287BRG3

Gene Model

Click here to download ENSSSCG00000035690's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000035690's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000035690	SFPQ	54	68.852	ENSSSCG00000009569	PSPC1	84	73.089

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000035690	SFPQ	100	97.454	ENSG00000116560	SFPQ	100	100.000	Homo_sapiens
ENSSSCG00000035690	SFPQ	62	74.596	ENSAPOG00000024257	sfpq	62	74.376	Acanthochromis_polyacanthus
ENSSSCG00000035690	SFPQ	63	100.000	ENSAMEG00000000815	SFPQ	100	100.000	Ailuropoda_melanoleuca
ENSSSCG00000035690	SFPQ	79	61.702	ENSACIG00000000905	sfpq	72	70.481	Amphilophus_citrinellus
ENSSSCG00000035690	SFPQ	61	74.246	ENSAOCG00000002889	sfpq	61	73.696	Amphiprion_ocellaris
ENSSSCG00000035690	SFPQ	61	74.246	ENSAPEG00000016556	sfpq	61	73.696	Amphiprion_percula
ENSSSCG00000035690	SFPQ	74	68.846	ENSATEG00000002981	sfpq	67	76.082	Anabas_testudineus
ENSSSCG00000035690	SFPQ	50	75.424	ENSANAG00000021268	-	100	74.359	Aotus_nancymaae
ENSSSCG00000035690	SFPQ	50	76.000	ENSANAG00000037798	-	99	75.714	Aotus_nancymaae
ENSSSCG00000035690	SFPQ	88	96.226	ENSANAG00000027438	-	68	83.447	Aotus_nancymaae
ENSSSCG00000035690	SFPQ	63	72.973	ENSACLG00000022332	sfpq	63	73.529	Astatotilapia_calliptera
ENSSSCG00000035690	SFPQ	69	66.529	ENSAMXG00000011538	sfpq	65	72.273	Astyanax_mexicanus
ENSSSCG00000035690	SFPQ	100	97.737	ENSBTAG00000016328	SFPQ	100	97.737	Bos_taurus
ENSSSCG00000035690	SFPQ	100	96.756	ENSCJAG00000001431	SFPQ	100	96.756	Callithrix_jacchus
ENSSSCG00000035690	SFPQ	100	92.450	ENSCAFG00000003595	-	100	92.450	Canis_familiaris
ENSSSCG00000035690	SFPQ	83	87.568	ENSCAFG00000018271	-	66	92.971	Canis_familiaris
ENSSSCG00000035690	SFPQ	85	83.694	ENSCAFG00000017608	-	87	83.361	Canis_familiaris
ENSSSCG00000035690	SFPQ	50	90.883	ENSCAFG00020010702	-	100	90.883	Canis_lupus_dingo
ENSSSCG00000035690	SFPQ	83	87.410	ENSCAFG00020004881	-	66	92.971	Canis_lupus_dingo
ENSSSCG00000035690	SFPQ	100	97.046	ENSCHIG00000023097	SFPQ	100	97.046	Capra_hircus
ENSSSCG00000035690	SFPQ	50	85.673	ENSTSYG00000035106	-	98	85.673	Carlito_syrichta
ENSSSCG00000035690	SFPQ	50	100.000	ENSTSYG00000037120	-	100	100.000	Carlito_syrichta
ENSSSCG00000035690	SFPQ	50	91.168	ENSCPOG00000015018	-	100	88.705	Cavia_porcellus
ENSSSCG00000035690	SFPQ	100	96.888	ENSCCAG00000029361	-	100	96.888	Cebus_capucinus
ENSSSCG00000035690	SFPQ	69	73.727	ENSCATG00000032664	-	85	75.041	Cercocebus_atys
ENSSSCG00000035690	SFPQ	64	96.462	ENSCATG00000036179	-	80	93.173	Cercocebus_atys
ENSSSCG00000035690	SFPQ	50	100.000	ENSCLAG00000009583	-	100	100.000	Chinchilla_lanigera
ENSSSCG00000035690	SFPQ	100	97.316	ENSCSAG00000001082	SFPQ	100	97.316	Chlorocebus_sabaeus
ENSSSCG00000035690	SFPQ	54	95.263	ENSCHOG00000009131	SFPQ	100	95.263	Choloepus_hoffmanni
ENSSSCG00000035690	SFPQ	63	92.428	ENSCPBG00000018674	SFPQ	69	92.793	Chrysemys_picta_bellii
ENSSSCG00000035690	SFPQ	50	100.000	ENSCANG00000028087	-	100	100.000	Colobus_angolensis_palliatus
ENSSSCG00000035690	SFPQ	85	92.180	ENSCGRG00001011698	Sfpq	85	93.844	Cricetulus_griseus_chok1gshd
ENSSSCG00000035690	SFPQ	61	99.536	ENSCGRG00000010128	Sfpq	95	99.536	Cricetulus_griseus_crigri
ENSSSCG00000035690	SFPQ	99	55.556	ENSCSEG00000007852	sfpq	66	72.936	Cynoglossus_semilaevis
ENSSSCG00000035690	SFPQ	90	51.912	ENSCVAG00000019538	sfpq	64	66.901	Cyprinodon_variegatus
ENSSSCG00000035690	SFPQ	60	74.065	ENSDARG00000011564	sfpq	100	83.478	Danio_rerio
ENSSSCG00000035690	SFPQ	100	96.484	ENSDNOG00000049454	SFPQ	100	96.484	Dasypus_novemcinctus
ENSSSCG00000035690	SFPQ	100	97.159	ENSDORG00000008109	Sfpq	100	97.159	Dipodomys_ordii
ENSSSCG00000035690	SFPQ	69	92.807	ENSETEG00000001095	SFPQ	61	92.807	Echinops_telfairi
ENSSSCG00000035690	SFPQ	100	97.602	ENSEASG00005012012	SFPQ	100	97.602	Equus_asinus_asinus
ENSSSCG00000035690	SFPQ	100	97.602	ENSECAG00000000642	SFPQ	100	97.602	Equus_caballus
ENSSSCG00000035690	SFPQ	61	72.917	ENSELUG00000023145	sfpq	66	71.462	Esox_lucius
ENSSSCG00000035690	SFPQ	100	99.145	ENSFCAG00000042862	SFPQ	100	99.145	Felis_catus
ENSSSCG00000035690	SFPQ	50	94.587	ENSFALG00000000731	SFPQ	100	94.587	Ficedula_albicollis
ENSSSCG00000035690	SFPQ	50	90.598	ENSFDAG00000017723	-	100	90.935	Fukomys_damarensis
ENSSSCG00000035690	SFPQ	62	67.356	ENSFHEG00000015200	sfpq	56	68.966	Fundulus_heteroclitus
ENSSSCG00000035690	SFPQ	66	69.807	ENSGMOG00000011957	sfpq	65	73.782	Gadus_morhua
ENSSSCG00000035690	SFPQ	62	74.943	ENSGMOG00000011950	SFPQ	74	75.000	Gadus_morhua
ENSSSCG00000035690	SFPQ	62	94.292	ENSGALG00000002514	SFPQ	68	94.292	Gallus_gallus
ENSSSCG00000035690	SFPQ	61	67.981	ENSGAFG00000014571	sfpq	57	77.914	Gambusia_affinis
ENSSSCG00000035690	SFPQ	62	74.654	ENSGACG00000002034	sfpq	68	74.654	Gasterosteus_aculeatus
ENSSSCG00000035690	SFPQ	75	99.538	ENSGGOG00000026354	SFPQ	100	100.000	Gorilla_gorilla
ENSSSCG00000035690	SFPQ	63	72.973	ENSHBUG00000016818	sfpq	63	73.529	Haplochromis_burtoni
ENSSSCG00000035690	SFPQ	100	95.603	ENSHGLG00000012001	SFPQ	100	95.603	Heterocephalus_glaber_female
ENSSSCG00000035690	SFPQ	50	100.000	ENSHGLG00100004136	-	100	100.000	Heterocephalus_glaber_male
ENSSSCG00000035690	SFPQ	63	73.214	ENSHCOG00000008612	sfpq	58	72.912	Hippocampus_comes
ENSSSCG00000035690	SFPQ	64	70.000	ENSIPUG00000013076	SFPQ	73	72.769	Ictalurus_punctatus
ENSSSCG00000035690	SFPQ	50	100.000	ENSSTOG00000014004	-	100	100.000	Ictidomys_tridecemlineatus
ENSSSCG00000035690	SFPQ	69	99.174	ENSJJAG00000015633	Sfpq	85	95.008	Jaculus_jaculus
ENSSSCG00000035690	SFPQ	92	54.882	ENSKMAG00000000238	sfpq	54	70.805	Kryptolebias_marmoratus
ENSSSCG00000035690	SFPQ	62	76.027	ENSLACG00000014728	SFPQ	70	80.093	Latimeria_chalumnae
ENSSSCG00000035690	SFPQ	89	61.875	ENSLOCG00000001067	sfpq	69	80.711	Lepisosteus_oculatus
ENSSSCG00000035690	SFPQ	97	90.147	ENSLAFG00000015951	SFPQ	100	90.147	Loxodonta_africana
ENSSSCG00000035690	SFPQ	100	97.313	ENSMFAG00000000797	SFPQ	100	97.313	Macaca_fascicularis
ENSSSCG00000035690	SFPQ	69	99.587	ENSMMUG00000019154	SFPQ	100	97.171	Macaca_mulatta
ENSSSCG00000035690	SFPQ	100	97.454	ENSMNEG00000038895	SFPQ	100	97.454	Macaca_nemestrina
ENSSSCG00000035690	SFPQ	50	96.866	ENSMLEG00000010643	-	100	96.866	Mandrillus_leucophaeus
ENSSSCG00000035690	SFPQ	77	66.606	ENSMAMG00000007875	sfpq	66	77.726	Mastacembelus_armatus
ENSSSCG00000035690	SFPQ	63	72.973	ENSMZEG00005026091	sfpq	64	73.529	Maylandia_zebra
ENSSSCG00000035690	SFPQ	51	94.643	ENSMGAG00000004237	SFPQ	100	91.049	Meleagris_gallopavo
ENSSSCG00000035690	SFPQ	68	98.536	ENSMAUG00000006402	Sfpq	85	93.511	Mesocricetus_auratus
ENSSSCG00000035690	SFPQ	100	97.450	ENSMICG00000027265	SFPQ	100	97.450	Microcebus_murinus
ENSSSCG00000035690	SFPQ	69	94.813	ENSMOCG00000019075	Sfpq	99	94.813	Microtus_ochrogaster
ENSSSCG00000035690	SFPQ	100	55.944	ENSMMOG00000001074	sfpq	65	74.419	Mola_mola
ENSSSCG00000035690	SFPQ	64	96.188	ENSMODG00000017937	SFPQ	65	96.372	Monodelphis_domestica
ENSSSCG00000035690	SFPQ	75	63.673	ENSMALG00000010381	sfpq	64	75.389	Monopterus_albus
ENSSSCG00000035690	SFPQ	85	94.807	MGP_CAROLIEiJ_G0026487	Sfpq	85	94.807	Mus_caroli
ENSSSCG00000035690	SFPQ	96	90.370	ENSMUSG00000028820	Sfpq	85	94.807	Mus_musculus
ENSSSCG00000035690	SFPQ	96	89.926	MGP_PahariEiJ_G0028818	Sfpq	85	94.472	Mus_pahari
ENSSSCG00000035690	SFPQ	96	90.370	MGP_SPRETEiJ_G0027466	Sfpq	85	94.807	Mus_spretus
ENSSSCG00000035690	SFPQ	64	97.111	ENSMLUG00000027090	SFPQ	100	97.111	Myotis_lucifugus
ENSSSCG00000035690	SFPQ	69	98.557	ENSNGAG00000000888	Sfpq	85	94.186	Nannospalax_galili
ENSSSCG00000035690	SFPQ	98	55.652	ENSNBRG00000017479	sfpq	64	73.756	Neolamprologus_brichardi
ENSSSCG00000035690	SFPQ	50	100.000	ENSNLEG00000035521	-	100	100.000	Nomascus_leucogenys
ENSSSCG00000035690	SFPQ	68	95.556	ENSMEUG00000014082	SFPQ	64	95.556	Notamacropus_eugenii
ENSSSCG00000035690	SFPQ	72	93.898	ENSOPRG00000013696	SFPQ	62	99.772	Ochotona_princeps
ENSSSCG00000035690	SFPQ	66	87.879	ENSODEG00000005485	SFPQ	86	86.809	Octodon_degus
ENSSSCG00000035690	SFPQ	63	74.099	ENSONIG00000017737	sfpq	57	80.601	Oreochromis_niloticus
ENSSSCG00000035690	SFPQ	50	97.436	ENSOANG00000008789	-	100	97.436	Ornithorhynchus_anatinus
ENSSSCG00000035690	SFPQ	73	89.615	ENSOCUG00000001877	SFPQ	86	100.000	Oryctolagus_cuniculus
ENSSSCG00000035690	SFPQ	72	65.422	ENSORLG00000007459	sfpq	57	72.158	Oryzias_latipes
ENSSSCG00000035690	SFPQ	87	58.386	ENSORLG00020011818	sfpq	57	72.158	Oryzias_latipes_hni
ENSSSCG00000035690	SFPQ	87	57.590	ENSORLG00015002131	sfpq	58	71.494	Oryzias_latipes_hsok
ENSSSCG00000035690	SFPQ	99	53.169	ENSOMEG00000018020	sfpq	56	71.926	Oryzias_melastigma
ENSSSCG00000035690	SFPQ	75	98.110	ENSOGAG00000027710	SFPQ	100	98.110	Otolemur_garnettii
ENSSSCG00000035690	SFPQ	75	99.769	ENSOARG00000019439	SFPQ	80	99.769	Ovis_aries
ENSSSCG00000035690	SFPQ	50	99.716	ENSPPRG00000015478	-	100	99.716	Panthera_pardus
ENSSSCG00000035690	SFPQ	50	100.000	ENSPTIG00000007710	-	100	100.000	Panthera_tigris_altaica
ENSSSCG00000035690	SFPQ	69	93.595	ENSPTRG00000000518	SFPQ	85	90.547	Pan_troglodytes
ENSSSCG00000035690	SFPQ	96	81.657	ENSPANG00000005380	SFPQ	72	99.793	Papio_anubis
ENSSSCG00000035690	SFPQ	61	76.798	ENSPKIG00000023035	sfpq	73	79.263	Paramormyrops_kingsleyae
ENSSSCG00000035690	SFPQ	61	94.664	ENSPSIG00000011494	SFPQ	100	94.664	Pelodiscus_sinensis
ENSSSCG00000035690	SFPQ	61	69.014	ENSPMGG00000023883	sfpq	58	81.115	Periophthalmus_magnuspinnatus
ENSSSCG00000035690	SFPQ	67	98.726	ENSPEMG00000009794	Sfpq	97	98.726	Peromyscus_maniculatus_bairdii
ENSSSCG00000035690	SFPQ	64	95.964	ENSPCIG00000000923	SFPQ	68	92.478	Phascolarctos_cinereus
ENSSSCG00000035690	SFPQ	91	55.641	ENSPFOG00000003127	sfpq	71	68.591	Poecilia_formosa
ENSSSCG00000035690	SFPQ	89	54.160	ENSPREG00000008060	sfpq	59	69.444	Poecilia_reticulata
ENSSSCG00000035690	SFPQ	100	97.454	ENSPPYG00000001560	SFPQ	100	97.454	Pongo_abelii
ENSSSCG00000035690	SFPQ	77	98.834	ENSPCAG00000006164	SFPQ	77	98.834	Procavia_capensis
ENSSSCG00000035690	SFPQ	100	97.171	ENSPCOG00000027127	SFPQ	100	97.171	Propithecus_coquereli
ENSSSCG00000035690	SFPQ	100	96.296	ENSPVAG00000001865	SFPQ	100	96.296	Pteropus_vampyrus
ENSSSCG00000035690	SFPQ	63	72.973	ENSPNYG00000007494	sfpq	62	73.303	Pundamilia_nyererei
ENSSSCG00000035690	SFPQ	75	63.910	ENSPNAG00000002128	sfpq	73	73.198	Pygocentrus_nattereri
ENSSSCG00000035690	SFPQ	68	98.745	ENSRNOG00000058461	Sfpq	86	94.975	Rattus_norvegicus
ENSSSCG00000035690	SFPQ	99	73.400	ENSRBIG00000035286	SFPQ	100	100.000	Rhinopithecus_bieti
ENSSSCG00000035690	SFPQ	70	100.000	ENSRROG00000040992	SFPQ	100	100.000	Rhinopithecus_roxellana
ENSSSCG00000035690	SFPQ	50	100.000	ENSSBOG00000024972	-	100	100.000	Saimiri_boliviensis_boliviensis
ENSSSCG00000035690	SFPQ	58	95.607	ENSSHAG00000016107	-	97	90.646	Sarcophilus_harrisii
ENSSSCG00000035690	SFPQ	50	91.453	ENSSHAG00000012312	-	100	90.883	Sarcophilus_harrisii
ENSSSCG00000035690	SFPQ	69	70.431	ENSSFOG00015009289	sfpq	79	78.005	Scleropages_formosus
ENSSSCG00000035690	SFPQ	62	77.083	ENSSMAG00000018201	sfpq	65	74.541	Scophthalmus_maximus
ENSSSCG00000035690	SFPQ	74	67.433	ENSSDUG00000008402	sfpq	65	78.291	Seriola_dumerili
ENSSSCG00000035690	SFPQ	52	100.000	ENSSARG00000006409	SFPQ	100	100.000	Sorex_araneus
ENSSSCG00000035690	SFPQ	64	71.274	ENSSPAG00000016550	sfpq	64	75.057	Stegastes_partitus
ENSSSCG00000035690	SFPQ	61	94.896	ENSTGUG00000001722	SFPQ	100	94.896	Taeniopygia_guttata
ENSSSCG00000035690	SFPQ	95	57.681	ENSTRUG00000003783	sfpq	62	76.092	Takifugu_rubripes
ENSSSCG00000035690	SFPQ	62	76.484	ENSTNIG00000011331	sfpq	72	76.027	Tetraodon_nigroviridis
ENSSSCG00000035690	SFPQ	79	85.575	ENSTBEG00000006238	SFPQ	79	80.792	Tupaia_belangeri
ENSSSCG00000035690	SFPQ	85	94.825	ENSTTRG00000013930	SFPQ	85	93.823	Tursiops_truncatus
ENSSSCG00000035690	SFPQ	60	98.377	ENSUAMG00000026758	SFPQ	100	98.377	Ursus_americanus
ENSSSCG00000035690	SFPQ	50	97.151	ENSUMAG00000008056	-	100	97.151	Ursus_maritimus
ENSSSCG00000035690	SFPQ	67	90.090	ENSVPAG00000006960	-	67	90.090	Vicugna_pacos
ENSSSCG00000035690	SFPQ	50	88.889	ENSVVUG00000000874	-	100	88.889	Vulpes_vulpes
ENSSSCG00000035690	SFPQ	65	80.172	ENSXETG00000009682	sfpq	100	85.139	Xenopus_tropicalis