EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000035779 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 171 bases
Position: chr1:130100667-130100837
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000024392	Ribosomal_S14	PF00253.21	3.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000026059	-	171	-	ENSSSCP00000024392	56 (aa)	-	I3LJY0

Gene Model

Click here to download ENSSSCG00000035779's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000035779's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000035779	-	100	87.500	ENSSSCG00000038507	-	100	87.500
ENSSSCG00000035779	-	77	62.791	ENSSSCG00000039388	-	88	62.791
ENSSSCG00000035779	-	100	80.357	ENSSSCG00000037150	-	100	80.357
ENSSSCG00000035779	-	100	76.786	ENSSSCG00000001855	-	100	76.786

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000035779	-	100	80.357	ENSACIG00000003518	rps29	75	80.357	Amphilophus_citrinellus
ENSSSCG00000035779	-	98	87.273	ENSANAG00000024423	-	100	87.273	Aotus_nancymaae
ENSSSCG00000035779	-	100	87.500	ENSBTAG00000052337	RPS29	100	87.500	Bos_taurus
ENSSSCG00000035779	-	100	87.500	ENSCJAG00000039096	-	100	87.500	Callithrix_jacchus
ENSSSCG00000035779	-	100	78.571	ENSCJAG00000031814	-	100	78.571	Callithrix_jacchus
ENSSSCG00000035779	-	100	80.357	ENSCAFG00020002956	-	100	80.357	Canis_lupus_dingo
ENSSSCG00000035779	-	100	82.143	ENSCAFG00020003021	-	100	82.143	Canis_lupus_dingo
ENSSSCG00000035779	-	98	65.455	ENSCAFG00020021989	-	50	65.455	Canis_lupus_dingo
ENSSSCG00000035779	-	100	85.714	ENSCHIG00000010682	-	100	85.714	Capra_hircus
ENSSSCG00000035779	-	100	71.429	ENSTSYG00000012410	-	100	71.429	Carlito_syrichta
ENSSSCG00000035779	-	100	87.500	ENSTSYG00000030415	-	100	87.500	Carlito_syrichta
ENSSSCG00000035779	-	100	87.500	ENSCPOG00000032637	-	100	87.500	Cavia_porcellus
ENSSSCG00000035779	-	100	87.500	ENSCCAG00000019033	-	100	87.500	Cebus_capucinus
ENSSSCG00000035779	-	100	87.500	ENSCCAG00000001210	-	100	87.500	Cebus_capucinus
ENSSSCG00000035779	-	100	87.500	ENSCCAG00000019847	-	100	87.500	Cebus_capucinus
ENSSSCG00000035779	-	100	85.714	ENSCCAG00000032225	-	100	85.714	Cebus_capucinus
ENSSSCG00000035779	-	100	85.714	ENSCCAG00000020608	-	100	85.714	Cebus_capucinus
ENSSSCG00000035779	-	100	87.500	ENSCCAG00000032090	-	100	87.500	Cebus_capucinus
ENSSSCG00000035779	-	100	87.500	ENSCATG00000017816	-	100	87.500	Cercocebus_atys
ENSSSCG00000035779	-	100	87.500	ENSCATG00000011469	-	100	87.500	Cercocebus_atys
ENSSSCG00000035779	-	100	67.857	ENSCATG00000041319	-	100	67.857	Cercocebus_atys
ENSSSCG00000035779	-	100	87.500	ENSCSAG00000015276	-	100	87.500	Chlorocebus_sabaeus
ENSSSCG00000035779	-	91	70.588	ENSCHOG00000011358	-	93	70.588	Choloepus_hoffmanni
ENSSSCG00000035779	-	98	69.091	ENSCPBG00000015078	-	64	69.091	Chrysemys_picta_bellii
ENSSSCG00000035779	-	100	80.357	ENSCPBG00000019385	-	100	80.357	Chrysemys_picta_bellii
ENSSSCG00000035779	-	100	87.500	ENSCPBG00000018320	-	100	87.500	Chrysemys_picta_bellii
ENSSSCG00000035779	-	100	87.500	ENSCANG00000037526	-	100	87.500	Colobus_angolensis_palliatus
ENSSSCG00000035779	-	100	85.714	ENSCANG00000010019	-	100	85.714	Colobus_angolensis_palliatus
ENSSSCG00000035779	-	100	87.500	ENSCANG00000019407	-	100	87.500	Colobus_angolensis_palliatus
ENSSSCG00000035779	-	100	78.571	ENSCGRG00001010167	-	100	78.571	Cricetulus_griseus_chok1gshd
ENSSSCG00000035779	-	100	75.000	ENSCGRG00001000990	-	66	75.000	Cricetulus_griseus_chok1gshd
ENSSSCG00000035779	-	100	85.714	ENSCGRG00001001537	-	92	85.714	Cricetulus_griseus_chok1gshd
ENSSSCG00000035779	-	100	80.357	ENSCGRG00001005461	-	100	80.357	Cricetulus_griseus_chok1gshd
ENSSSCG00000035779	-	100	87.500	ENSCGRG00001020113	Rps29	100	87.500	Cricetulus_griseus_chok1gshd
ENSSSCG00000035779	-	100	85.714	ENSCGRG00000018591	-	92	85.714	Cricetulus_griseus_crigri
ENSSSCG00000035779	-	100	78.571	ENSCGRG00000019055	-	100	78.571	Cricetulus_griseus_crigri
ENSSSCG00000035779	-	100	75.000	ENSCGRG00000019197	-	66	75.000	Cricetulus_griseus_crigri
ENSSSCG00000035779	-	100	80.357	ENSCGRG00000019460	-	100	80.357	Cricetulus_griseus_crigri
ENSSSCG00000035779	-	100	62.500	ENSCGRG00000009208	-	100	62.500	Cricetulus_griseus_crigri
ENSSSCG00000035779	-	98	83.636	ENSCSEG00000001818	rps29	60	83.636	Cynoglossus_semilaevis
ENSSSCG00000035779	-	100	83.929	ENSDARG00000041232	rps29	100	83.929	Danio_rerio
ENSSSCG00000035779	-	100	82.143	ENSDORG00000026532	-	100	82.143	Dipodomys_ordii
ENSSSCG00000035779	-	100	85.714	ENSDORG00000028731	-	100	85.714	Dipodomys_ordii
ENSSSCG00000035779	-	100	78.333	ENSDORG00000013874	-	100	78.333	Dipodomys_ordii
ENSSSCG00000035779	-	100	73.214	ENSEBUG00000011966	rps29	65	73.214	Eptatretus_burgeri
ENSSSCG00000035779	-	98	67.273	ENSEASG00005020582	-	95	67.273	Equus_asinus_asinus
ENSSSCG00000035779	-	98	83.636	ENSEASG00005007821	-	65	83.636	Equus_asinus_asinus
ENSSSCG00000035779	-	98	83.636	ENSECAG00000011782	RPS29	65	83.636	Equus_caballus
ENSSSCG00000035779	-	100	76.786	ENSFCAG00000024162	-	100	76.786	Felis_catus
ENSSSCG00000035779	-	100	87.500	ENSFALG00000001738	-	92	87.500	Ficedula_albicollis
ENSSSCG00000035779	-	100	87.500	ENSFALG00000001808	-	92	87.500	Ficedula_albicollis
ENSSSCG00000035779	-	100	85.714	ENSGACG00000012858	rps29	100	85.714	Gasterosteus_aculeatus
ENSSSCG00000035779	-	98	80.000	ENSGAGG00000016743	-	92	80.000	Gopherus_agassizii
ENSSSCG00000035779	-	84	82.979	ENSGAGG00000025088	-	57	82.979	Gopherus_agassizii
ENSSSCG00000035779	-	100	83.929	ENSGGOG00000042896	-	100	83.929	Gorilla_gorilla
ENSSSCG00000035779	-	100	87.500	ENSGGOG00000042996	-	100	87.500	Gorilla_gorilla
ENSSSCG00000035779	-	100	83.929	ENSHBUG00000018115	rps29	100	83.929	Haplochromis_burtoni
ENSSSCG00000035779	-	100	71.429	ENSJJAG00000011627	-	100	71.429	Jaculus_jaculus
ENSSSCG00000035779	-	100	87.500	ENSLAFG00000031145	-	100	87.500	Loxodonta_africana
ENSSSCG00000035779	-	100	87.500	ENSMFAG00000026635	-	100	87.500	Macaca_fascicularis
ENSSSCG00000035779	-	100	87.500	ENSMMUG00000032153	-	100	87.500	Macaca_mulatta
ENSSSCG00000035779	-	100	87.500	ENSMMUG00000043502	-	100	87.500	Macaca_mulatta
ENSSSCG00000035779	-	100	85.714	ENSMMUG00000040278	-	100	85.714	Macaca_mulatta
ENSSSCG00000035779	-	100	78.571	ENSMMUG00000043202	-	100	78.571	Macaca_mulatta
ENSSSCG00000035779	-	100	87.500	ENSMMUG00000008939	-	100	87.500	Macaca_mulatta
ENSSSCG00000035779	-	100	87.500	ENSMNEG00000027952	-	100	87.500	Macaca_nemestrina
ENSSSCG00000035779	-	100	87.500	ENSMNEG00000037893	-	100	87.500	Macaca_nemestrina
ENSSSCG00000035779	-	100	85.714	ENSMLEG00000026733	-	100	85.714	Mandrillus_leucophaeus
ENSSSCG00000035779	-	100	83.929	ENSMZEG00005012261	rps29	100	83.929	Maylandia_zebra
ENSSSCG00000035779	-	100	87.500	ENSMGAG00000013705	-	100	87.500	Meleagris_gallopavo
ENSSSCG00000035779	-	98	78.182	ENSMAUG00000019410	-	100	78.182	Mesocricetus_auratus
ENSSSCG00000035779	-	61	85.294	ENSMAUG00000000899	-	97	85.294	Mesocricetus_auratus
ENSSSCG00000035779	-	100	78.571	ENSMAUG00000005362	-	100	78.571	Mesocricetus_auratus
ENSSSCG00000035779	-	100	87.500	ENSMICG00000041582	-	100	87.500	Microcebus_murinus
ENSSSCG00000035779	-	100	87.500	ENSMICG00000045654	-	100	87.500	Microcebus_murinus
ENSSSCG00000035779	-	100	87.500	ENSMOCG00000017681	Rps29	100	87.500	Microtus_ochrogaster
ENSSSCG00000035779	-	96	87.037	ENSMMOG00000005119	rps29	51	87.037	Mola_mola
ENSSSCG00000035779	-	100	80.357	ENSMODG00000025305	-	100	80.357	Monodelphis_domestica
ENSSSCG00000035779	-	100	87.500	MGP_CAROLIEiJ_G0017795	-	100	87.500	Mus_caroli
ENSSSCG00000035779	-	100	87.500	ENSMUSG00000034892	Rps29	100	87.500	Mus_musculus
ENSSSCG00000035779	-	100	87.500	MGP_PahariEiJ_G0029551	-	100	87.500	Mus_pahari
ENSSSCG00000035779	-	100	80.357	MGP_SPRETEiJ_G0019597	-	92	80.357	Mus_spretus
ENSSSCG00000035779	-	100	87.500	MGP_SPRETEiJ_G0018641	Rps29	100	87.500	Mus_spretus
ENSSSCG00000035779	-	100	80.357	ENSMLUG00000029871	-	100	80.357	Myotis_lucifugus
ENSSSCG00000035779	-	100	87.500	ENSMLUG00000025262	-	100	87.500	Myotis_lucifugus
ENSSSCG00000035779	-	98	87.273	ENSMLUG00000025007	-	100	87.273	Myotis_lucifugus
ENSSSCG00000035779	-	100	87.500	ENSNGAG00000013159	Rps29	100	87.500	Nannospalax_galili
ENSSSCG00000035779	-	100	82.143	ENSNGAG00000011632	-	100	82.143	Nannospalax_galili
ENSSSCG00000035779	-	100	80.357	ENSNBRG00000021854	rps29	70	80.357	Neolamprologus_brichardi
ENSSSCG00000035779	-	100	85.714	ENSNLEG00000018259	-	100	85.714	Nomascus_leucogenys
ENSSSCG00000035779	-	100	71.429	ENSNLEG00000031810	-	64	71.429	Nomascus_leucogenys
ENSSSCG00000035779	-	100	87.500	ENSODEG00000019220	-	100	87.500	Octodon_degus
ENSSSCG00000035779	-	100	87.500	ENSODEG00000018519	-	100	87.500	Octodon_degus
ENSSSCG00000035779	-	100	85.714	ENSODEG00000019457	-	100	85.714	Octodon_degus
ENSSSCG00000035779	-	93	84.615	ENSODEG00000019249	-	100	84.615	Octodon_degus
ENSSSCG00000035779	-	100	87.500	ENSODEG00000019960	-	100	87.500	Octodon_degus
ENSSSCG00000035779	-	100	83.929	ENSONIG00000000829	rps29	100	83.929	Oreochromis_niloticus
ENSSSCG00000035779	-	100	87.500	ENSOCUG00000027423	RPS29	100	87.500	Oryctolagus_cuniculus
ENSSSCG00000035779	-	98	83.636	ENSOMEG00000010831	rps29	69	83.636	Oryzias_melastigma
ENSSSCG00000035779	-	100	78.571	ENSOGAG00000033843	-	100	78.571	Otolemur_garnettii
ENSSSCG00000035779	-	100	78.571	ENSOGAG00000032475	-	100	78.571	Otolemur_garnettii
ENSSSCG00000035779	-	100	78.571	ENSOARG00000007891	-	92	78.571	Ovis_aries
ENSSSCG00000035779	-	100	75.000	ENSPPRG00000017352	-	100	75.000	Panthera_pardus
ENSSSCG00000035779	-	100	85.714	ENSPPRG00000011061	-	100	85.714	Panthera_pardus
ENSSSCG00000035779	-	100	87.500	ENSPPRG00000022391	-	100	87.500	Panthera_pardus
ENSSSCG00000035779	-	100	87.500	ENSPTIG00000006207	-	100	87.500	Panthera_tigris_altaica
ENSSSCG00000035779	-	100	78.571	ENSPANG00000029212	-	100	78.571	Papio_anubis
ENSSSCG00000035779	-	100	87.500	ENSPANG00000033247	-	100	87.500	Papio_anubis
ENSSSCG00000035779	-	100	87.500	ENSPANG00000023730	-	100	87.500	Papio_anubis
ENSSSCG00000035779	-	100	87.500	ENSPPYG00000005785	RPS29	100	87.500	Pongo_abelii
ENSSSCG00000035779	-	100	78.571	ENSPCOG00000015576	-	100	78.571	Propithecus_coquereli
ENSSSCG00000035779	-	100	87.500	ENSPCOG00000024671	-	100	87.500	Propithecus_coquereli
ENSSSCG00000035779	-	100	87.500	ENSRNOG00000004196	LOC108350501	100	87.500	Rattus_norvegicus
ENSSSCG00000035779	-	100	87.500	ENSRNOG00000028939	Rps29	100	87.500	Rattus_norvegicus
ENSSSCG00000035779	-	100	87.500	ENSRNOG00000029443	LOC108352650	100	87.500	Rattus_norvegicus
ENSSSCG00000035779	-	100	87.500	ENSRNOG00000032542	LOC108351482	100	87.500	Rattus_norvegicus
ENSSSCG00000035779	-	100	85.714	ENSRBIG00000020563	-	100	85.714	Rhinopithecus_bieti
ENSSSCG00000035779	-	100	89.286	ENSRBIG00000007567	-	100	89.286	Rhinopithecus_bieti
ENSSSCG00000035779	-	100	85.714	ENSRBIG00000011261	-	100	85.714	Rhinopithecus_bieti
ENSSSCG00000035779	-	100	87.500	ENSRBIG00000017110	-	100	87.500	Rhinopithecus_bieti
ENSSSCG00000035779	-	100	87.500	ENSRBIG00000016462	-	100	87.500	Rhinopithecus_bieti
ENSSSCG00000035779	-	100	87.500	ENSRROG00000009633	-	100	87.500	Rhinopithecus_roxellana
ENSSSCG00000035779	-	100	87.500	ENSRROG00000009364	-	100	87.500	Rhinopithecus_roxellana
ENSSSCG00000035779	-	100	87.500	ENSRROG00000020854	-	100	87.500	Rhinopithecus_roxellana
ENSSSCG00000035779	-	100	87.500	ENSRROG00000037175	-	100	87.500	Rhinopithecus_roxellana
ENSSSCG00000035779	-	100	83.929	ENSRROG00000017887	-	100	83.929	Rhinopithecus_roxellana
ENSSSCG00000035779	-	100	87.500	ENSRROG00000011987	-	100	87.500	Rhinopithecus_roxellana
ENSSSCG00000035779	-	100	89.286	ENSRROG00000015879	-	100	89.286	Rhinopithecus_roxellana
ENSSSCG00000035779	-	100	85.714	ENSSBOG00000019207	-	100	85.714	Saimiri_boliviensis_boliviensis
ENSSSCG00000035779	-	100	85.714	ENSSBOG00000012724	-	100	85.714	Saimiri_boliviensis_boliviensis
ENSSSCG00000035779	-	61	85.294	ENSSBOG00000029046	-	64	85.294	Saimiri_boliviensis_boliviensis
ENSSSCG00000035779	-	100	87.500	ENSSBOG00000009349	-	100	87.500	Saimiri_boliviensis_boliviensis
ENSSSCG00000035779	-	98	83.636	ENSSFOG00015000394	-	73	83.636	Scleropages_formosus
ENSSSCG00000035779	-	100	82.143	ENSSDUG00000009578	rps29	63	82.143	Seriola_dumerili
ENSSSCG00000035779	-	91	64.706	ENSUAMG00000005201	-	96	64.706	Ursus_americanus
ENSSSCG00000035779	-	100	87.500	ENSUAMG00000022821	-	100	87.500	Ursus_americanus
ENSSSCG00000035779	-	100	85.714	ENSUAMG00000016993	-	100	85.714	Ursus_americanus
ENSSSCG00000035779	-	100	83.929	ENSUAMG00000002506	-	100	83.929	Ursus_americanus
ENSSSCG00000035779	-	100	78.571	ENSUAMG00000003050	-	100	78.571	Ursus_americanus
ENSSSCG00000035779	-	98	85.455	ENSUAMG00000012422	-	54	85.455	Ursus_americanus
ENSSSCG00000035779	-	100	78.571	ENSUMAG00000008130	-	100	78.571	Ursus_maritimus
ENSSSCG00000035779	-	100	82.143	ENSUMAG00000012903	-	100	82.143	Ursus_maritimus
ENSSSCG00000035779	-	98	85.455	ENSUMAG00000007648	-	54	85.455	Ursus_maritimus
ENSSSCG00000035779	-	100	85.714	ENSUMAG00000019137	-	100	85.714	Ursus_maritimus
ENSSSCG00000035779	-	100	87.500	ENSVVUG00000000785	-	100	87.500	Vulpes_vulpes
ENSSSCG00000035779	-	98	65.455	ENSVVUG00000029871	-	53	65.455	Vulpes_vulpes
ENSSSCG00000035779	-	100	83.929	ENSVVUG00000016811	-	100	83.929	Vulpes_vulpes
ENSSSCG00000035779	-	100	87.500	ENSXETG00000027734	rps29	100	87.500	Xenopus_tropicalis
ENSSSCG00000035779	-	100	82.143	ENSXCOG00000007248	rps29	72	82.143	Xiphophorus_couchianus
ENSSSCG00000035779	-	80	82.222	ENSXMAG00000019760	-	80	82.222	Xiphophorus_maculatus