EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSSCG00000036018 (Gene tree)
Gene ID
100518202
Gene Symbol
APOBEC2
Alias
ARCD1|ARP1
Full Name
apolipoprotein B mRNA editing enzyme catalytic subunit 2
Gene Type
protein_coding
Species
Sus_scrofa
Status
putative
Strand
Plus strand
Length
14437 bases
Position
chr7:36364300-36378736
Accession
100518202
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSSCP00000035406APOBEC_NPF08210.114.2e-5011
ENSSSCP00000056390APOBEC_NPF08210.115e-5011
ENSSSCP00000035406APOBEC_CPF05240.142.6e-2511
ENSSSCP00000056390APOBEC_CPF05240.143.1e-2511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSSCT00000037415APOBEC2-2027012-ENSSSCP00000035406213 (aa)-A0A286ZUS5
ENSSSCT00000064999APOBEC2-2012635XM_001928899ENSSSCP00000056390224 (aa)XP_001928934A0A287BIN1
Gene Model
Click here to download ENSSSCG00000036018's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000036018's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSSCG00000036018APOBEC28135.593ENSSSCG00000000667AICDA8633.523
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSSCG00000036018APOBEC210091.518ENSG00000124701APOBEC210091.518Homo_sapiens
ENSSSCG00000036018APOBEC29953.812ENSAPOG00000019390apobec2b7455.556Acanthochromis_polyacanthus
ENSSSCG00000036018APOBEC28986.772ENSAMEG00000004467APOBEC27586.772Ailuropoda_melanoleuca
ENSSSCG00000036018APOBEC29953.812ENSACIG00000002472APOBEC27758.639Amphilophus_citrinellus
ENSSSCG00000036018APOBEC29353.266ENSACIG00000016370apobec2a7253.646Amphilophus_citrinellus
ENSSSCG00000036018APOBEC29752.511ENSAOCG00000003291apobec2a7756.186Amphiprion_ocellaris
ENSSSCG00000036018APOBEC29954.260ENSAOCG00000023355apobec2b7555.288Amphiprion_ocellaris
ENSSSCG00000036018APOBEC29752.511ENSAPEG00000003630apobec2a7756.186Amphiprion_percula
ENSSSCG00000036018APOBEC29954.260ENSAPEG00000004591apobec2b7555.288Amphiprion_percula
ENSSSCG00000036018APOBEC29854.091ENSATEG00000023043APOBEC26859.162Anabas_testudineus
ENSSSCG00000036018APOBEC29854.091ENSATEG00000000956apobec2a9958.242Anabas_testudineus
ENSSSCG00000036018APOBEC29971.491ENSAPLG00000002895APOBEC29375.234Anas_platyrhynchos
ENSSSCG00000036018APOBEC28576.243ENSACAG00000016506APOBEC29675.824Anolis_carolinensis
ENSSSCG00000036018APOBEC210091.071ENSANAG00000026993APOBEC210091.071Aotus_nancymaae
ENSSSCG00000036018APOBEC29952.915ENSACLG00000007634APOBEC26958.115Astatotilapia_calliptera
ENSSSCG00000036018APOBEC28452.222ENSACLG00000026736-9752.222Astatotilapia_calliptera
ENSSSCG00000036018APOBEC210048.684ENSAMXG00000042992apobec2a7753.398Astyanax_mexicanus
ENSSSCG00000036018APOBEC29657.870ENSAMXG00000015966apobec2b7158.911Astyanax_mexicanus
ENSSSCG00000036018APOBEC210091.071ENSBTAG00000005974APOBEC27291.071Bos_taurus
ENSSSCG00000036018APOBEC210091.518ENSCJAG00000004063APOBEC210091.518Callithrix_jacchus
ENSSSCG00000036018APOBEC210091.964ENSCAFG00000001575APOBEC210091.964Canis_familiaris
ENSSSCG00000036018APOBEC210092.411ENSCAFG00020008306APOBEC210092.411Canis_lupus_dingo
ENSSSCG00000036018APOBEC210091.964ENSCHIG00000026348APOBEC210091.964Capra_hircus
ENSSSCG00000036018APOBEC29493.333ENSTSYG00000008206APOBEC29393.333Carlito_syrichta
ENSSSCG00000036018APOBEC29492.417ENSCAPG00000015084APOBEC29392.417Cavia_aperea
ENSSSCG00000036018APOBEC29492.417ENSCPOG00000036103APOBEC29392.417Cavia_porcellus
ENSSSCG00000036018APOBEC210091.071ENSCCAG00000033987APOBEC210091.071Cebus_capucinus
ENSSSCG00000036018APOBEC210089.732ENSCATG00000010691APOBEC210089.732Cercocebus_atys
ENSSSCG00000036018APOBEC210090.351ENSCLAG00000013817APOBEC29393.365Chinchilla_lanigera
ENSSSCG00000036018APOBEC210091.071ENSCSAG00000011177APOBEC210091.071Chlorocebus_sabaeus
ENSSSCG00000036018APOBEC28591.111ENSCHOG00000008930APOBEC210091.111Choloepus_hoffmanni
ENSSSCG00000036018APOBEC28377.005ENSCPBG00000017469APOBEC29573.934Chrysemys_picta_bellii
ENSSSCG00000036018APOBEC210091.518ENSCANG00000035072APOBEC210091.518Colobus_angolensis_palliatus
ENSSSCG00000036018APOBEC210091.071ENSCGRG00001014983Apobec210091.071Cricetulus_griseus_chok1gshd
ENSSSCG00000036018APOBEC210091.071ENSCGRG00000007835Apobec210091.071Cricetulus_griseus_crigri
ENSSSCG00000036018APOBEC29853.636ENSCSEG00000020201apobec2a8053.623Cynoglossus_semilaevis
ENSSSCG00000036018APOBEC28556.545ENSCSEG00000000690-6956.545Cynoglossus_semilaevis
ENSSSCG00000036018APOBEC29257.971ENSCVAG00000012342apobec2b7557.971Cyprinodon_variegatus
ENSSSCG00000036018APOBEC28659.585ENSDARG00000018881apobec2a7657.895Danio_rerio
ENSSSCG00000036018APOBEC29356.604ENSDARG00000113992apobec2b7756.604Danio_rerio
ENSSSCG00000036018APOBEC210064.192ENSDNOG00000033914APOBEC210063.319Dasypus_novemcinctus
ENSSSCG00000036018APOBEC210088.210ENSDORG00000006447Apobec29290.047Dipodomys_ordii
ENSSSCG00000036018APOBEC29486.256ENSETEG00000000624APOBEC29286.256Echinops_telfairi
ENSSSCG00000036018APOBEC28690.625ENSEASG00005002937APOBEC210090.625Equus_asinus_asinus
ENSSSCG00000036018APOBEC210091.518ENSECAG00000006576APOBEC210091.518Equus_caballus
ENSSSCG00000036018APOBEC210088.839ENSEEUG00000006046APOBEC210088.839Erinaceus_europaeus
ENSSSCG00000036018APOBEC28655.959ENSELUG00000003736apobec2a6954.455Esox_lucius
ENSSSCG00000036018APOBEC210092.411ENSFCAG00000004108APOBEC210092.411Felis_catus
ENSSSCG00000036018APOBEC29959.912ENSFALG00000003910APOBEC29461.972Ficedula_albicollis
ENSSSCG00000036018APOBEC210092.000ENSFDAG00000006015APOBEC210092.000Fukomys_damarensis
ENSSSCG00000036018APOBEC29956.951ENSFHEG00000005492apobec2b7962.304Fundulus_heteroclitus
ENSSSCG00000036018APOBEC28554.450ENSGMOG00000006819apobec2b7654.450Gadus_morhua
ENSSSCG00000036018APOBEC28558.333ENSGMOG00000007028apobec2a10058.333Gadus_morhua
ENSSSCG00000036018APOBEC210069.869ENSGALG00000003226APOBEC29573.953Gallus_gallus
ENSSSCG00000036018APOBEC28561.257ENSGAFG00000007634apobec2b6061.257Gambusia_affinis
ENSSSCG00000036018APOBEC28658.031ENSGACG00000009663apobec2b8955.769Gasterosteus_aculeatus
ENSSSCG00000036018APOBEC28656.995ENSGACG00000011671apobec2a10056.995Gasterosteus_aculeatus
ENSSSCG00000036018APOBEC28376.471ENSGAGG00000010347APOBEC29573.113Gopherus_agassizii
ENSSSCG00000036018APOBEC29492.857ENSGGOG00000001099APOBEC29192.857Gorilla_gorilla
ENSSSCG00000036018APOBEC28658.549ENSHBUG00000015890apobec2a7558.549Haplochromis_burtoni
ENSSSCG00000036018APOBEC29953.363ENSHBUG00000005993apobec2b6958.639Haplochromis_burtoni
ENSSSCG00000036018APOBEC29490.995ENSHGLG00000017169APOBEC29390.995Heterocephalus_glaber_female
ENSSSCG00000036018APOBEC29490.995ENSHGLG00100019442APOBEC29390.995Heterocephalus_glaber_male
ENSSSCG00000036018APOBEC28955.276ENSHCOG00000020319apobec2a7855.276Hippocampus_comes
ENSSSCG00000036018APOBEC28659.067ENSHCOG00000002712APOBEC27159.067Hippocampus_comes
ENSSSCG00000036018APOBEC29750.917ENSIPUG00000017355apobec2a5951.659Ictalurus_punctatus
ENSSSCG00000036018APOBEC28957.500ENSIPUG00000013784Apobec27855.660Ictalurus_punctatus
ENSSSCG00000036018APOBEC210091.518ENSSTOG00000023643APOBEC210091.518Ictidomys_tridecemlineatus
ENSSSCG00000036018APOBEC210089.732ENSJJAG00000009733Apobec210089.732Jaculus_jaculus
ENSSSCG00000036018APOBEC29256.522ENSKMAG00000020631apobec2b7556.522Kryptolebias_marmoratus
ENSSSCG00000036018APOBEC29950.893ENSLBEG00000025214apobec2a8254.680Labrus_bergylta
ENSSSCG00000036018APOBEC29853.881ENSLBEG00000009422-6658.639Labrus_bergylta
ENSSSCG00000036018APOBEC29862.555ENSLACG00000015985APOBEC28567.000Latimeria_chalumnae
ENSSSCG00000036018APOBEC29160.294ENSLOCG00000012415apobec2b7260.294Lepisosteus_oculatus
ENSSSCG00000036018APOBEC29592.453ENSLAFG00000016563APOBEC210091.964Loxodonta_africana
ENSSSCG00000036018APOBEC210091.071ENSMFAG00000044645APOBEC210091.071Macaca_fascicularis
ENSSSCG00000036018APOBEC210091.071ENSMMUG00000021171APOBEC210091.071Macaca_mulatta
ENSSSCG00000036018APOBEC210091.071ENSMNEG00000045497APOBEC210091.071Macaca_nemestrina
ENSSSCG00000036018APOBEC210091.071ENSMLEG00000028328APOBEC210091.071Mandrillus_leucophaeus
ENSSSCG00000036018APOBEC29956.054ENSMAMG00000007926APOBEC26861.257Mastacembelus_armatus
ENSSSCG00000036018APOBEC29855.909ENSMAMG00000023685apobec2a7459.067Mastacembelus_armatus
ENSSSCG00000036018APOBEC28658.031ENSMZEG00005005240-9653.448Maylandia_zebra
ENSSSCG00000036018APOBEC29952.915ENSMZEG00005027159APOBEC26958.115Maylandia_zebra
ENSSSCG00000036018APOBEC210069.869ENSMGAG00000010173APOBEC29476.796Meleagris_gallopavo
ENSSSCG00000036018APOBEC210091.071ENSMAUG00000011016Apobec210091.071Mesocricetus_auratus
ENSSSCG00000036018APOBEC210091.964ENSMICG00000043339APOBEC210091.964Microcebus_murinus
ENSSSCG00000036018APOBEC210090.625ENSMOCG00000001904Apobec210090.625Microtus_ochrogaster
ENSSSCG00000036018APOBEC29354.327ENSMMOG00000008681apobec2b7654.327Mola_mola
ENSSSCG00000036018APOBEC25444.828ENSMMOG00000009531-6744.444Mola_mola
ENSSSCG00000036018APOBEC29982.589ENSMODG00000013090APOBEC29584.689Monodelphis_domestica
ENSSSCG00000036018APOBEC28656.701ENSMALG00000020523apobec2a7656.701Monopterus_albus
ENSSSCG00000036018APOBEC28558.639ENSMALG00000013779APOBEC27258.639Monopterus_albus
ENSSSCG00000036018APOBEC210089.286MGP_CAROLIEiJ_G0021727Apobec210089.286Mus_caroli
ENSSSCG00000036018APOBEC210089.286ENSMUSG00000040694Apobec210089.286Mus_musculus
ENSSSCG00000036018APOBEC210089.732MGP_PahariEiJ_G0020716Apobec210089.732Mus_pahari
ENSSSCG00000036018APOBEC29490.047ENSMPUG00000013691APOBEC29090.476Mustela_putorius_furo
ENSSSCG00000036018APOBEC29589.202ENSMLUG00000011327APOBEC29189.048Myotis_lucifugus
ENSSSCG00000036018APOBEC210091.518ENSNGAG00000013717Apobec210091.518Nannospalax_galili
ENSSSCG00000036018APOBEC29953.571ENSNBRG00000018806apobec2b6158.115Neolamprologus_brichardi
ENSSSCG00000036018APOBEC28658.333ENSNBRG00000021776apobec2a7558.333Neolamprologus_brichardi
ENSSSCG00000036018APOBEC210091.964ENSNLEG00000005057APOBEC210091.964Nomascus_leucogenys
ENSSSCG00000036018APOBEC29983.482ENSMEUG00000011623APOBEC29585.238Notamacropus_eugenii
ENSSSCG00000036018APOBEC210089.912ENSOPRG00000014808APOBEC210091.228Ochotona_princeps
ENSSSCG00000036018APOBEC29492.417ENSODEG00000016183APOBEC29292.417Octodon_degus
ENSSSCG00000036018APOBEC29953.363ENSONIG00000012289apobec2b6958.639Oreochromis_niloticus
ENSSSCG00000036018APOBEC28659.067ENSONIG00000004644-7559.067Oreochromis_niloticus
ENSSSCG00000036018APOBEC28082.456ENSOANG00000000824APOBEC29879.006Ornithorhynchus_anatinus
ENSSSCG00000036018APOBEC210092.070ENSOCUG00000028008APOBEC210092.070Oryctolagus_cuniculus
ENSSSCG00000036018APOBEC29451.905ENSORLG00000010752apobec2a8651.905Oryzias_latipes
ENSSSCG00000036018APOBEC29952.018ENSORLG00000022372APOBEC26957.592Oryzias_latipes
ENSSSCG00000036018APOBEC29952.466ENSORLG00020006164APOBEC26958.115Oryzias_latipes_hni
ENSSSCG00000036018APOBEC29451.905ENSORLG00020004153apobec2a8651.905Oryzias_latipes_hni
ENSSSCG00000036018APOBEC28558.639ENSORLG00015022089-6958.639Oryzias_latipes_hsok
ENSSSCG00000036018APOBEC29451.905ENSORLG00015021781apobec2a8651.905Oryzias_latipes_hsok
ENSSSCG00000036018APOBEC29953.812ENSOMEG00000015449APOBEC28256.250Oryzias_melastigma
ENSSSCG00000036018APOBEC29851.598ENSOMEG00000001311apobec2a8352.451Oryzias_melastigma
ENSSSCG00000036018APOBEC210091.518ENSOGAG00000002632APOBEC210091.518Otolemur_garnettii
ENSSSCG00000036018APOBEC210091.071ENSOARG00000000820APOBEC210091.071Ovis_aries
ENSSSCG00000036018APOBEC29492.857ENSPPAG00000035598APOBEC29192.857Pan_paniscus
ENSSSCG00000036018APOBEC210092.411ENSPPRG00000008530APOBEC210092.411Panthera_pardus
ENSSSCG00000036018APOBEC29492.417ENSPTIG00000011084APOBEC29492.857Panthera_tigris_altaica
ENSSSCG00000036018APOBEC29492.857ENSPTRG00000029679APOBEC29192.857Pan_troglodytes
ENSSSCG00000036018APOBEC210091.071ENSPANG00000007121APOBEC210091.071Papio_anubis
ENSSSCG00000036018APOBEC29953.219ENSPKIG00000005395apobec2a7957.500Paramormyrops_kingsleyae
ENSSSCG00000036018APOBEC29758.257ENSPKIG00000004741apobec2b6862.176Paramormyrops_kingsleyae
ENSSSCG00000036018APOBEC28376.471ENSPSIG00000013480APOBEC29371.831Pelodiscus_sinensis
ENSSSCG00000036018APOBEC29757.798ENSPMGG00000004044apobec2a8157.895Periophthalmus_magnuspinnatus
ENSSSCG00000036018APOBEC28558.115ENSPMGG00000002686APOBEC25558.115Periophthalmus_magnuspinnatus
ENSSSCG00000036018APOBEC29490.952ENSPEMG00000005724Apobec210090.179Peromyscus_maniculatus_bairdii
ENSSSCG00000036018APOBEC29358.173ENSPFOG00000001216apobec2b7558.173Poecilia_formosa
ENSSSCG00000036018APOBEC29358.173ENSPLAG00000002074apobec2b8258.454Poecilia_latipinna
ENSSSCG00000036018APOBEC29358.173ENSPMEG00000017537apobec2b7558.173Poecilia_mexicana
ENSSSCG00000036018APOBEC29356.731ENSPREG00000020060apobec2b6556.731Poecilia_reticulata
ENSSSCG00000036018APOBEC210091.071ENSPPYG00000016586APOBEC210091.071Pongo_abelii
ENSSSCG00000036018APOBEC28593.717ENSPCAG00000011433APOBEC210093.717Procavia_capensis
ENSSSCG00000036018APOBEC210092.857ENSPCOG00000026935APOBEC210092.857Propithecus_coquereli
ENSSSCG00000036018APOBEC210090.179ENSPVAG00000008316APOBEC210090.179Pteropus_vampyrus
ENSSSCG00000036018APOBEC29953.363ENSPNYG00000016747apobec2b6958.639Pundamilia_nyererei
ENSSSCG00000036018APOBEC28657.292ENSPNAG00000010382apobec2a7156.995Pygocentrus_nattereri
ENSSSCG00000036018APOBEC28959.500ENSPNAG00000013666apobec2b7557.547Pygocentrus_nattereri
ENSSSCG00000036018APOBEC210090.179ENSRNOG00000012303Apobec210090.179Rattus_norvegicus
ENSSSCG00000036018APOBEC210091.964ENSRBIG00000044756APOBEC210091.964Rhinopithecus_bieti
ENSSSCG00000036018APOBEC210091.518ENSRROG00000030082APOBEC210091.518Rhinopithecus_roxellana
ENSSSCG00000036018APOBEC210091.071ENSSBOG00000028496APOBEC210091.071Saimiri_boliviensis_boliviensis
ENSSSCG00000036018APOBEC29386.124ENSSHAG00000017771APOBEC29585.714Sarcophilus_harrisii
ENSSSCG00000036018APOBEC29857.534ENSSFOG00015022920apobec26861.658Scleropages_formosus
ENSSSCG00000036018APOBEC28647.849ENSSFOG00015005437-7747.849Scleropages_formosus
ENSSSCG00000036018APOBEC28559.686ENSSMAG00000005110APOBEC27356.667Scophthalmus_maximus
ENSSSCG00000036018APOBEC29753.456ENSSMAG00000001011apobec2a5658.031Scophthalmus_maximus
ENSSSCG00000036018APOBEC29356.250ENSSDUG00000014543apobec2b7556.250Seriola_dumerili
ENSSSCG00000036018APOBEC29456.132ENSSDUG00000007013apobec2a8156.459Seriola_dumerili
ENSSSCG00000036018APOBEC29356.250ENSSLDG00000003321apobec2b7556.250Seriola_lalandi_dorsalis
ENSSSCG00000036018APOBEC29854.338ENSSLDG00000020199apobec2a8155.288Seriola_lalandi_dorsalis
ENSSSCG00000036018APOBEC29466.505ENSSPUG00000010839APOBEC29965.865Sphenodon_punctatus
ENSSSCG00000036018APOBEC29950.000ENSSPAG00000016299-7754.922Stegastes_partitus
ENSSSCG00000036018APOBEC29954.709ENSSPAG00000005253apobec2b7555.769Stegastes_partitus
ENSSSCG00000036018APOBEC29970.485ENSTGUG00000018533APOBEC29572.770Taeniopygia_guttata
ENSSSCG00000036018APOBEC29355.769ENSTRUG00000012839apobec2b7655.769Takifugu_rubripes
ENSSSCG00000036018APOBEC29453.081ENSTRUG00000009123apobec2a8152.857Takifugu_rubripes
ENSSSCG00000036018APOBEC29355.288ENSTNIG00000015038apobec2b7655.288Tetraodon_nigroviridis
ENSSSCG00000036018APOBEC210092.857ENSTBEG00000003553APOBEC210092.857Tupaia_belangeri
ENSSSCG00000036018APOBEC210088.839ENSTTRG00000013392APOBEC210088.839Tursiops_truncatus
ENSSSCG00000036018APOBEC210085.526ENSUAMG00000027667APOBEC29288.095Ursus_americanus
ENSSSCG00000036018APOBEC25986.765ENSUMAG00000012252APOBEC27791.525Ursus_maritimus
ENSSSCG00000036018APOBEC25597.468ENSVPAG00000008024APOBEC25597.468Vicugna_pacos
ENSSSCG00000036018APOBEC29492.857ENSVVUG00000026617APOBEC210091.964Vulpes_vulpes
ENSSSCG00000036018APOBEC210050.000ENSXETG00000008007apobec29252.968Xenopus_tropicalis
ENSSSCG00000036018APOBEC29159.113ENSXCOG00000007398apobec2b7759.113Xiphophorus_couchianus
ENSSSCG00000036018APOBEC28560.733ENSXMAG00000008134apobec2b6860.733Xiphophorus_maculatus

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