EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000036156 (Gene tree)
Gene ID: 100157350
Gene Symbol: RBM12
Alias: HRIHFB2091|KIAA0765|SWAN
Full Name: RNA binding motif protein 12
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 14535 bases
Position: chr17:38982708-38997242
Accession: 100157350
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000025080	RRM_1	PF00076.22	2.9e-30	1	3
ENSSSCP00000025080	RRM_1	PF00076.22	2.9e-30	2	3
ENSSSCP00000025080	RRM_1	PF00076.22	2.9e-30	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000028045	RBM12-201	5318	XM_003483946	ENSSSCP00000025080	933 (aa)	XP_003483994	I3LLW0

Gene Model

Click here to download ENSSSCG00000036156's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000036156's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000036156	RBM12	54	72.414	ENSSSCG00000006110	RBM12B	51	72.414

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000036156	RBM12	100	94.023	ENSG00000244462	RBM12	100	98.507	Homo_sapiens
ENSSSCG00000036156	RBM12	100	97.320	ENSAMEG00000019189	RBM12	100	97.320	Ailuropoda_melanoleuca
ENSSSCG00000036156	RBM12	100	76.915	ENSACAG00000006330	RBM12	98	76.702	Anolis_carolinensis
ENSSSCG00000036156	RBM12	83	95.220	ENSANAG00000032596	RBM12	98	95.085	Aotus_nancymaae
ENSSSCG00000036156	RBM12	100	94.544	ENSBTAG00000044015	RBM12	100	94.124	Bos_taurus
ENSSSCG00000036156	RBM12	100	97.320	ENSCAFG00000008256	RBM12	98	97.320	Canis_familiaris
ENSSSCG00000036156	RBM12	100	96.892	ENSCAFG00020005650	RBM12	100	96.892	Canis_lupus_dingo
ENSSSCG00000036156	RBM12	100	95.606	ENSCHIG00000024592	RBM12	100	95.606	Capra_hircus
ENSSSCG00000036156	RBM12	100	93.790	ENSTSYG00000030563	RBM12	98	94.218	Carlito_syrichta
ENSSSCG00000036156	RBM12	84	88.402	ENSCAPG00000006176	RBM12	81	94.233	Cavia_aperea
ENSSSCG00000036156	RBM12	100	88.978	ENSCPOG00000035170	RBM12	100	88.377	Cavia_porcellus
ENSSSCG00000036156	RBM12	96	91.946	ENSCCAG00000036056	-	98	92.394	Cebus_capucinus
ENSSSCG00000036156	RBM12	100	74.439	ENSCCAG00000035899	-	100	68.977	Cebus_capucinus
ENSSSCG00000036156	RBM12	100	94.130	ENSCATG00000030934	RBM12	98	94.877	Cercocebus_atys
ENSSSCG00000036156	RBM12	100	94.861	ENSCLAG00000017230	RBM12	100	94.433	Chinchilla_lanigera
ENSSSCG00000036156	RBM12	100	93.810	ENSCANG00000030552	RBM12	98	94.557	Colobus_angolensis_palliatus
ENSSSCG00000036156	RBM12	100	88.206	ENSCGRG00001021144	Rbm12	100	88.004	Cricetulus_griseus_chok1gshd
ENSSSCG00000036156	RBM12	100	88.206	ENSCGRG00000012719	Rbm12	100	88.004	Cricetulus_griseus_crigri
ENSSSCG00000036156	RBM12	100	53.805	ENSDARG00000100636	rbm12	90	70.370	Danio_rerio
ENSSSCG00000036156	RBM12	76	86.402	ENSDORG00000000606	-	100	82.828	Dipodomys_ordii
ENSSSCG00000036156	RBM12	100	94.652	ENSDORG00000028509	-	100	94.652	Dipodomys_ordii
ENSSSCG00000036156	RBM12	53	85.870	ENSEBUG00000016806	rbm12	89	59.740	Eptatretus_burgeri
ENSSSCG00000036156	RBM12	100	96.463	ENSECAG00000021997	RBM12	100	96.463	Equus_caballus
ENSSSCG00000036156	RBM12	56	97.312	ENSEEUG00000008858	-	56	97.312	Erinaceus_europaeus
ENSSSCG00000036156	RBM12	100	95.396	ENSFDAG00000014663	RBM12	100	95.396	Fukomys_damarensis
ENSSSCG00000036156	RBM12	100	78.396	ENSGALG00000030253	RBM12	100	79.144	Gallus_gallus
ENSSSCG00000036156	RBM12	100	94.023	ENSGGOG00000028500	RBM12	98	94.771	Gorilla_gorilla
ENSSSCG00000036156	RBM12	100	94.218	ENSHGLG00000013208	RBM12	100	95.075	Heterocephalus_glaber_female
ENSSSCG00000036156	RBM12	89	97.492	ENSHGLG00100019158	RBM12	90	97.492	Heterocephalus_glaber_male
ENSSSCG00000036156	RBM12	100	92.308	ENSSTOG00000019739	RBM12	100	92.097	Ictidomys_tridecemlineatus
ENSSSCG00000036156	RBM12	100	94.754	ENSLAFG00000010341	RBM12	100	95.075	Loxodonta_africana
ENSSSCG00000036156	RBM12	100	94.130	ENSMFAG00000032583	RBM12	98	94.877	Macaca_fascicularis
ENSSSCG00000036156	RBM12	100	94.237	ENSMMUG00000020960	CPNE1	100	94.984	Macaca_mulatta
ENSSSCG00000036156	RBM12	100	94.237	ENSMNEG00000045365	RBM12	98	94.984	Macaca_nemestrina
ENSSSCG00000036156	RBM12	100	94.237	ENSMLEG00000032492	RBM12	98	94.984	Mandrillus_leucophaeus
ENSSSCG00000036156	RBM12	100	77.647	ENSMGAG00000001502	RBM12	100	79.198	Meleagris_gallopavo
ENSSSCG00000036156	RBM12	100	89.315	ENSMAUG00000012800	Rbm12	100	94.374	Mesocricetus_auratus
ENSSSCG00000036156	RBM12	100	95.075	ENSMICG00000032761	-	98	94.754	Microcebus_murinus
ENSSSCG00000036156	RBM12	75	86.286	ENSMICG00000029540	-	74	84.935	Microcebus_murinus
ENSSSCG00000036156	RBM12	100	80.639	ENSMOCG00000012950	Rbm12	100	86.560	Microtus_ochrogaster
ENSSSCG00000036156	RBM12	100	85.332	ENSMODG00000001591	RBM12	98	85.118	Monodelphis_domestica
ENSSSCG00000036156	RBM12	100	86.819	MGP_CAROLIEiJ_G0024551	Rbm12	100	93.249	Mus_caroli
ENSSSCG00000036156	RBM12	100	87.223	ENSMUSG00000089824	Rbm12	100	86.030	Mus_musculus
ENSSSCG00000036156	RBM12	100	86.720	MGP_PahariEiJ_G0025996	Rbm12	100	93.017	Mus_pahari
ENSSSCG00000036156	RBM12	100	86.653	MGP_SPRETEiJ_G0025473	Rbm12	100	84.960	Mus_spretus
ENSSSCG00000036156	RBM12	100	96.356	ENSMPUG00000017789	-	100	96.356	Mustela_putorius_furo
ENSSSCG00000036156	RBM12	100	96.141	ENSMLUG00000011217	RBM12	98	96.141	Myotis_lucifugus
ENSSSCG00000036156	RBM12	100	81.000	ENSNGAG00000015846	Rbm12	100	86.821	Nannospalax_galili
ENSSSCG00000036156	RBM12	100	94.130	ENSNLEG00000010268	RBM12	98	94.877	Nomascus_leucogenys
ENSSSCG00000036156	RBM12	100	84.797	ENSMEUG00000007621	RBM12	100	84.582	Notamacropus_eugenii
ENSSSCG00000036156	RBM12	100	93.504	ENSOPRG00000005687	RBM12	100	93.504	Ochotona_princeps
ENSSSCG00000036156	RBM12	100	90.010	ENSODEG00000013870	RBM12	100	90.112	Octodon_degus
ENSSSCG00000036156	RBM12	100	94.023	ENSPPAG00000040719	RBM12	98	94.771	Pan_paniscus
ENSSSCG00000036156	RBM12	100	94.023	ENSPTRG00000040708	-	98	94.771	Pan_troglodytes
ENSSSCG00000036156	RBM12	100	94.023	ENSPTRG00000013446	RBM12	98	94.771	Pan_troglodytes
ENSSSCG00000036156	RBM12	100	94.237	ENSPANG00000020003	CPNE1	98	94.984	Papio_anubis
ENSSSCG00000036156	RBM12	88	87.077	ENSPSIG00000007369	RBM12	98	87.077	Pelodiscus_sinensis
ENSSSCG00000036156	RBM12	100	80.677	ENSPEMG00000017769	Rbm12	100	82.388	Peromyscus_maniculatus_bairdii
ENSSSCG00000036156	RBM12	59	78.571	ENSPFOG00000023551	rbm12	98	78.873	Poecilia_formosa
ENSSSCG00000036156	RBM12	100	94.036	ENSPPYG00000010960	RBM12	100	94.356	Pongo_abelii
ENSSSCG00000036156	RBM12	100	92.819	ENSPCAG00000008653	RBM12	100	92.283	Procavia_capensis
ENSSSCG00000036156	RBM12	100	96.154	ENSPCOG00000023724	RBM12	98	96.154	Propithecus_coquereli
ENSSSCG00000036156	RBM12	100	96.034	ENSPVAG00000014937	RBM12	100	96.034	Pteropus_vampyrus
ENSSSCG00000036156	RBM12	75	93.314	ENSRNOG00000049913	LOC100910990	99	92.458	Rattus_norvegicus
ENSSSCG00000036156	RBM12	75	93.314	ENSRNOG00000019723	Rbm12	99	92.458	Rattus_norvegicus
ENSSSCG00000036156	RBM12	100	94.023	ENSRBIG00000042965	RBM12	98	94.771	Rhinopithecus_bieti
ENSSSCG00000036156	RBM12	100	94.023	ENSRROG00000037485	RBM12	98	94.771	Rhinopithecus_roxellana
ENSSSCG00000036156	RBM12	83	95.220	ENSSBOG00000027633	RBM12	98	95.085	Saimiri_boliviensis_boliviensis
ENSSSCG00000036156	RBM12	100	85.546	ENSSHAG00000018585	RBM12	100	85.332	Sarcophilus_harrisii
ENSSSCG00000036156	RBM12	100	79.764	ENSTGUG00000003002	RBM12	100	79.122	Taeniopygia_guttata
ENSSSCG00000036156	RBM12	100	96.892	ENSTTRG00000017035	RBM12	100	96.892	Tursiops_truncatus
ENSSSCG00000036156	RBM12	100	96.892	ENSUAMG00000010430	RBM12	100	96.892	Ursus_americanus
ENSSSCG00000036156	RBM12	91	100.000	ENSVPAG00000003812	RBM12	91	100.000	Vicugna_pacos
ENSSSCG00000036156	RBM12	100	60.252	ENSXETG00000033541	RBM12	72	56.657	Xenopus_tropicalis