EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000036170 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 3602 bases
Position: chr14:15116472-15120073
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000036548	RRM_1	PF00076.22	6.3e-20	1	1
ENSSSCP00000038361	RRM_1	PF00076.22	8.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000043864	-	666	-	ENSSSCP00000038361	221 (aa)	-	A0A287A3N4
ENSSSCT00000052708	-	1398	-	ENSSSCP00000036548	465 (aa)	-	A0A286ZY34

Gene Model

Click here to download ENSSSCG00000036170's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000036170's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000036170	-	96	50.505	ENSSSCG00000003660	-	89	50.505
ENSSSCG00000036170	-	51	35.738	ENSSSCG00000040194	PABPC5	77	36.486
ENSSSCG00000036170	-	95	40.708	ENSSSCG00000006063	PABPC1	88	41.710
ENSSSCG00000036170	-	92	34.982	ENSSSCG00000007382	PABPC1L	87	34.982
ENSSSCG00000036170	-	96	32.573	ENSSSCG00000036199	-	91	32.454

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000036170	-	96	51.730	ENSG00000090621	PABPC4	99	53.731	Homo_sapiens
ENSSSCG00000036170	-	95	44.946	ENSAPOG00000001161	pabpc4	88	44.723	Acanthochromis_polyacanthus
ENSSSCG00000036170	-	96	50.673	ENSAMEG00000011535	-	89	50.673	Ailuropoda_melanoleuca
ENSSSCG00000036170	-	95	36.210	ENSAMEG00000015083	-	88	36.742	Ailuropoda_melanoleuca
ENSSSCG00000036170	-	96	44.991	ENSACIG00000023343	pabpc4	89	44.991	Amphilophus_citrinellus
ENSSSCG00000036170	-	95	44.946	ENSAOCG00000021529	pabpc4	88	44.936	Amphiprion_ocellaris
ENSSSCG00000036170	-	95	44.946	ENSAPEG00000019196	pabpc4	88	44.723	Amphiprion_percula
ENSSSCG00000036170	-	95	44.505	ENSATEG00000007402	pabpc4	88	44.464	Anabas_testudineus
ENSSSCG00000036170	-	96	45.502	ENSAPLG00000009729	-	89	46.903	Anas_platyrhynchos
ENSSSCG00000036170	-	93	47.984	ENSACAG00000002544	PABPC4	100	44.991	Anolis_carolinensis
ENSSSCG00000036170	-	96	50.168	ENSANAG00000025079	PABPC4	95	47.809	Aotus_nancymaae
ENSSSCG00000036170	-	96	45.213	ENSACLG00000019558	pabpc4	89	45.213	Astatotilapia_calliptera
ENSSSCG00000036170	-	95	44.981	ENSAMXG00000018779	pabpc4	87	44.796	Astyanax_mexicanus
ENSSSCG00000036170	-	96	51.641	ENSBTAG00000017125	PABPC4	89	51.641	Bos_taurus
ENSSSCG00000036170	-	81	54.545	ENSCJAG00000045953	-	93	53.282	Callithrix_jacchus
ENSSSCG00000036170	-	96	50.168	ENSCJAG00000002512	-	89	50.168	Callithrix_jacchus
ENSSSCG00000036170	-	96	50.673	ENSCAFG00000003081	PABPC4	89	49.481	Canis_familiaris
ENSSSCG00000036170	-	96	50.673	ENSCAFG00020004161	PABPC4	89	50.673	Canis_lupus_dingo
ENSSSCG00000036170	-	96	46.283	ENSCHIG00000023385	-	89	45.725	Capra_hircus
ENSSSCG00000036170	-	96	50.168	ENSCHIG00000019398	-	89	50.168	Capra_hircus
ENSSSCG00000036170	-	96	50.505	ENSTSYG00000006532	PABPC4	89	50.505	Carlito_syrichta
ENSSSCG00000036170	-	96	49.832	ENSCAPG00000015984	PABPC4	90	49.832	Cavia_aperea
ENSSSCG00000036170	-	96	49.909	ENSCPOG00000009552	PABPC4	89	49.832	Cavia_porcellus
ENSSSCG00000036170	-	96	50.084	ENSCCAG00000037306	PABPC4	89	50.253	Cebus_capucinus
ENSSSCG00000036170	-	96	50.337	ENSCATG00000042164	PABPC4	95	47.809	Cercocebus_atys
ENSSSCG00000036170	-	96	50.000	ENSCLAG00000011899	PABPC4	89	50.088	Chinchilla_lanigera
ENSSSCG00000036170	-	96	50.337	ENSCSAG00000001135	PABPC4	89	50.337	Chlorocebus_sabaeus
ENSSSCG00000036170	-	84	53.846	ENSCHOG00000005327	PABPC4	79	53.846	Choloepus_hoffmanni
ENSSSCG00000036170	-	96	46.726	ENSCPBG00000001038	PABPC4	89	46.372	Chrysemys_picta_bellii
ENSSSCG00000036170	-	96	50.337	ENSCANG00000034177	PABPC4	90	50.337	Colobus_angolensis_palliatus
ENSSSCG00000036170	-	94	49.540	ENSCGRG00001018166	Pabpc4	89	49.412	Cricetulus_griseus_chok1gshd
ENSSSCG00000036170	-	94	50.880	ENSCGRG00000009777	Pabpc4	90	50.777	Cricetulus_griseus_crigri
ENSSSCG00000036170	-	95	44.128	ENSCSEG00000000130	pabpc4	88	44.128	Cynoglossus_semilaevis
ENSSSCG00000036170	-	96	44.425	ENSCVAG00000019246	pabpc4	90	44.425	Cyprinodon_variegatus
ENSSSCG00000036170	-	94	44.207	ENSDARG00000059259	pabpc4	89	43.860	Danio_rerio
ENSSSCG00000036170	-	96	49.308	ENSDNOG00000018444	-	100	49.308	Dasypus_novemcinctus
ENSSSCG00000036170	-	96	51.384	ENSDORG00000011581	Pabpc4	89	51.384	Dipodomys_ordii
ENSSSCG00000036170	-	87	54.000	ENSETEG00000018453	-	72	51.139	Echinops_telfairi
ENSSSCG00000036170	-	83	36.688	ENSETEG00000009172	-	91	36.765	Echinops_telfairi
ENSSSCG00000036170	-	98	41.152	ENSEBUG00000013782	pabpc4	96	39.078	Eptatretus_burgeri
ENSSSCG00000036170	-	94	41.098	ENSEBUG00000000992	pabpc4	88	40.934	Eptatretus_burgeri
ENSSSCG00000036170	-	96	50.505	ENSEASG00005014119	PABPC4	89	50.505	Equus_asinus_asinus
ENSSSCG00000036170	-	96	50.505	ENSECAG00000009396	PABPC4	89	50.505	Equus_caballus
ENSSSCG00000036170	-	96	48.567	ENSEEUG00000002962	PABPC4	89	48.567	Erinaceus_europaeus
ENSSSCG00000036170	-	96	42.701	ENSELUG00000003195	pabpc4	89	44.714	Esox_lucius
ENSSSCG00000036170	-	96	50.673	ENSFCAG00000015254	-	89	50.673	Felis_catus
ENSSSCG00000036170	-	95	45.826	ENSFALG00000000543	PABPC4	89	46.004	Ficedula_albicollis
ENSSSCG00000036170	-	87	52.838	ENSFDAG00000010581	-	99	40.832	Fukomys_damarensis
ENSSSCG00000036170	-	96	50.337	ENSFDAG00000020016	-	89	50.337	Fukomys_damarensis
ENSSSCG00000036170	-	96	45.996	ENSFHEG00000007548	pabpc4	88	45.996	Fundulus_heteroclitus
ENSSSCG00000036170	-	95	43.894	ENSGMOG00000019025	pabpc4	88	43.894	Gadus_morhua
ENSSSCG00000036170	-	96	46.372	ENSGALG00000003800	PABPC4	89	45.567	Gallus_gallus
ENSSSCG00000036170	-	96	44.382	ENSGAFG00000018195	pabpc4	91	44.382	Gambusia_affinis
ENSSSCG00000036170	-	96	44.107	ENSGACG00000007179	pabpc4	88	44.107	Gasterosteus_aculeatus
ENSSSCG00000036170	-	96	46.549	ENSGAGG00000001888	PABPC4	89	46.195	Gopherus_agassizii
ENSSSCG00000036170	-	96	50.337	ENSGGOG00000004002	PABPC4	89	50.337	Gorilla_gorilla
ENSSSCG00000036170	-	96	45.213	ENSHBUG00000020206	pabpc4	89	45.213	Haplochromis_burtoni
ENSSSCG00000036170	-	96	51.730	ENSHGLG00000011162	PABPC4	89	51.730	Heterocephalus_glaber_female
ENSSSCG00000036170	-	96	51.730	ENSHGLG00100001580	PABPC4	89	51.730	Heterocephalus_glaber_male
ENSSSCG00000036170	-	96	44.565	ENSHCOG00000012694	pabpc4	88	44.565	Hippocampus_comes
ENSSSCG00000036170	-	92	42.134	ENSIPUG00000016620	pabpc4	89	42.707	Ictalurus_punctatus
ENSSSCG00000036170	-	96	51.557	ENSSTOG00000010416	PABPC4	89	51.557	Ictidomys_tridecemlineatus
ENSSSCG00000036170	-	96	51.224	ENSJJAG00000007781	Pabpc4	89	51.573	Jaculus_jaculus
ENSSSCG00000036170	-	96	45.208	ENSKMAG00000013597	pabpc4	89	45.115	Kryptolebias_marmoratus
ENSSSCG00000036170	-	95	45.035	ENSLBEG00000013654	pabpc4	87	45.035	Labrus_bergylta
ENSSSCG00000036170	-	96	44.640	ENSLACG00000011907	PABPC4	89	44.991	Latimeria_chalumnae
ENSSSCG00000036170	-	96	45.423	ENSLOCG00000001877	pabpc4	89	45.423	Lepisosteus_oculatus
ENSSSCG00000036170	-	96	50.673	ENSLAFG00000000151	PABPC4	89	50.673	Loxodonta_africana
ENSSSCG00000036170	-	96	50.337	ENSMFAG00000041481	PABPC4	89	50.337	Macaca_fascicularis
ENSSSCG00000036170	-	96	50.337	ENSMMUG00000007497	PABPC4	89	50.337	Macaca_mulatta
ENSSSCG00000036170	-	96	50.168	ENSMNEG00000043054	PABPC4	89	50.168	Macaca_nemestrina
ENSSSCG00000036170	-	96	50.337	ENSMLEG00000040716	PABPC4	95	47.809	Mandrillus_leucophaeus
ENSSSCG00000036170	-	95	45.045	ENSMAMG00000010025	pabpc4	89	45.293	Mastacembelus_armatus
ENSSSCG00000036170	-	96	45.355	ENSMZEG00005006141	pabpc4	89	45.035	Maylandia_zebra
ENSSSCG00000036170	-	95	45.299	ENSMGAG00000005408	PABPC4	99	45.128	Meleagris_gallopavo
ENSSSCG00000036170	-	75	53.659	ENSMAUG00000001295	-	97	53.659	Mesocricetus_auratus
ENSSSCG00000036170	-	56	56.122	ENSMAUG00000019763	-	64	55.046	Mesocricetus_auratus
ENSSSCG00000036170	-	95	48.059	ENSMICG00000036729	-	96	48.059	Microcebus_murinus
ENSSSCG00000036170	-	87	58.547	ENSMICG00000016633	-	91	56.818	Microcebus_murinus
ENSSSCG00000036170	-	94	49.660	ENSMOCG00000006763	Pabpc4	89	49.414	Microtus_ochrogaster
ENSSSCG00000036170	-	96	45.648	ENSMMOG00000002363	pabpc4	88	46.364	Mola_mola
ENSSSCG00000036170	-	93	44.041	ENSMODG00000017657	-	89	43.655	Monodelphis_domestica
ENSSSCG00000036170	-	95	44.964	ENSMALG00000011017	pabpc4	88	44.920	Monopterus_albus
ENSSSCG00000036170	-	96	49.663	MGP_CAROLIEiJ_G0026435	-	89	49.663	Mus_caroli
ENSSSCG00000036170	-	96	44.965	MGP_CAROLIEiJ_G0024864	-	100	44.792	Mus_caroli
ENSSSCG00000036170	-	96	50.865	ENSMUSG00000011257	Pabpc4	89	50.865	Mus_musculus
ENSSSCG00000036170	-	96	49.158	MGP_PahariEiJ_G0028765	Pabpc4	90	49.158	Mus_pahari
ENSSSCG00000036170	-	96	51.245	MGP_SPRETEiJ_G0027415	Pabpc4	97	51.245	Mus_spretus
ENSSSCG00000036170	-	96	50.673	ENSMPUG00000014414	-	89	50.673	Mustela_putorius_furo
ENSSSCG00000036170	-	94	33.008	ENSMPUG00000006836	-	90	33.008	Mustela_putorius_furo
ENSSSCG00000036170	-	96	50.638	ENSMLUG00000012068	PABPC4	88	50.624	Myotis_lucifugus
ENSSSCG00000036170	-	96	51.903	ENSNGAG00000018292	Pabpc4	89	51.903	Nannospalax_galili
ENSSSCG00000036170	-	89	43.612	ENSNBRG00000010047	-	97	43.612	Neolamprologus_brichardi
ENSSSCG00000036170	-	96	51.730	ENSNLEG00000011928	PABPC4	89	51.730	Nomascus_leucogenys
ENSSSCG00000036170	-	76	68.421	ENSOPRG00000011984	PABPC4	70	68.421	Ochotona_princeps
ENSSSCG00000036170	-	96	49.832	ENSODEG00000006592	-	89	49.912	Octodon_degus
ENSSSCG00000036170	-	87	54.400	ENSODEG00000017434	-	98	52.239	Octodon_degus
ENSSSCG00000036170	-	96	45.390	ENSONIG00000008176	pabpc4	89	45.390	Oreochromis_niloticus
ENSSSCG00000036170	-	96	45.502	ENSOANG00000010001	PABPC4	89	45.156	Ornithorhynchus_anatinus
ENSSSCG00000036170	-	87	54.000	ENSOCUG00000000562	PABPC4	74	49.907	Oryctolagus_cuniculus
ENSSSCG00000036170	-	95	44.865	ENSORLG00000017479	pabpc4	89	44.779	Oryzias_latipes
ENSSSCG00000036170	-	95	45.624	ENSORLG00020018644	pabpc4	88	45.179	Oryzias_latipes_hni
ENSSSCG00000036170	-	95	44.922	ENSORLG00015015042	pabpc4	88	45.179	Oryzias_latipes_hsok
ENSSSCG00000036170	-	95	45.198	ENSOMEG00000014410	pabpc4	89	44.912	Oryzias_melastigma
ENSSSCG00000036170	-	96	51.635	ENSOGAG00000004067	PABPC4	89	51.635	Otolemur_garnettii
ENSSSCG00000036170	-	96	50.168	ENSOARG00000020060	PABPC4	89	50.168	Ovis_aries
ENSSSCG00000036170	-	96	50.337	ENSPPAG00000043625	PABPC4	89	50.337	Pan_paniscus
ENSSSCG00000036170	-	96	50.673	ENSPPRG00000024727	PABPC4	89	50.673	Panthera_pardus
ENSSSCG00000036170	-	96	50.673	ENSPTIG00000005829	PABPC4	89	50.673	Panthera_tigris_altaica
ENSSSCG00000036170	-	96	50.337	ENSPTRG00000000573	PABPC4	89	50.337	Pan_troglodytes
ENSSSCG00000036170	-	96	50.505	ENSPANG00000009484	PABPC4	95	48.207	Papio_anubis
ENSSSCG00000036170	-	95	45.173	ENSPKIG00000025356	pabpc4	88	45.053	Paramormyrops_kingsleyae
ENSSSCG00000036170	-	96	46.726	ENSPSIG00000016892	PABPC4	89	46.372	Pelodiscus_sinensis
ENSSSCG00000036170	-	96	43.929	ENSPMGG00000009073	pabpc4	88	45.981	Periophthalmus_magnuspinnatus
ENSSSCG00000036170	-	96	49.129	ENSPEMG00000024193	-	89	48.780	Peromyscus_maniculatus_bairdii
ENSSSCG00000036170	-	96	49.495	ENSPEMG00000023569	-	89	49.495	Peromyscus_maniculatus_bairdii
ENSSSCG00000036170	-	81	37.474	ENSPMAG00000007885	pabpc4	99	37.014	Petromyzon_marinus
ENSSSCG00000036170	-	84	36.759	ENSPMAG00000002836	pabpc4	88	36.957	Petromyzon_marinus
ENSSSCG00000036170	-	93	44.894	ENSPCIG00000020674	PABPC4	91	45.301	Phascolarctos_cinereus
ENSSSCG00000036170	-	96	44.092	ENSPFOG00000002682	pabpc4	88	43.915	Poecilia_formosa
ENSSSCG00000036170	-	96	44.092	ENSPLAG00000010112	pabpc4	88	43.915	Poecilia_latipinna
ENSSSCG00000036170	-	94	44.444	ENSPMEG00000019739	pabpc4	88	43.915	Poecilia_mexicana
ENSSSCG00000036170	-	96	44.268	ENSPREG00000001589	pabpc4	95	44.268	Poecilia_reticulata
ENSSSCG00000036170	-	96	50.337	ENSPPYG00000001506	PABPC4	89	50.337	Pongo_abelii
ENSSSCG00000036170	-	96	46.970	ENSPCAG00000003341	PABPC4	95	46.970	Procavia_capensis
ENSSSCG00000036170	-	96	48.644	ENSPCOG00000025882	-	100	49.005	Propithecus_coquereli
ENSSSCG00000036170	-	96	50.420	ENSPCOG00000023725	-	89	50.420	Propithecus_coquereli
ENSSSCG00000036170	-	96	50.253	ENSPVAG00000002187	PABPC4	99	50.253	Pteropus_vampyrus
ENSSSCG00000036170	-	96	45.213	ENSPNYG00000006134	pabpc4	89	45.213	Pundamilia_nyererei
ENSSSCG00000036170	-	96	44.621	ENSPNAG00000024355	pabpc4	88	44.621	Pygocentrus_nattereri
ENSSSCG00000036170	-	96	51.127	ENSRNOG00000028592	AABR07035074.1	89	51.127	Rattus_norvegicus
ENSSSCG00000036170	-	96	51.211	ENSRNOG00000015642	Pabpc4	89	51.211	Rattus_norvegicus
ENSSSCG00000036170	-	96	50.337	ENSRBIG00000039761	PABPC4	89	50.337	Rhinopithecus_bieti
ENSSSCG00000036170	-	96	50.337	ENSRROG00000033355	PABPC4	89	50.337	Rhinopithecus_roxellana
ENSSSCG00000036170	-	96	50.253	ENSSBOG00000026193	PABPC4	89	50.422	Saimiri_boliviensis_boliviensis
ENSSSCG00000036170	-	93	44.425	ENSSHAG00000018139	PABPC4	89	44.810	Sarcophilus_harrisii
ENSSSCG00000036170	-	95	44.852	ENSSFOG00015023514	pabpc4	92	44.852	Scleropages_formosus
ENSSSCG00000036170	-	95	45.063	ENSSMAG00000009007	pabpc4	88	45.063	Scophthalmus_maximus
ENSSSCG00000036170	-	95	44.384	ENSSDUG00000012683	pabpc4	88	44.345	Seriola_dumerili
ENSSSCG00000036170	-	95	44.384	ENSSLDG00000013025	pabpc4	88	44.345	Seriola_lalandi_dorsalis
ENSSSCG00000036170	-	96	50.168	ENSSARG00000000310	PABPC4	93	50.168	Sorex_araneus
ENSSSCG00000036170	-	96	45.234	ENSSPUG00000003204	PABPC4	89	45.811	Sphenodon_punctatus
ENSSSCG00000036170	-	95	45.076	ENSSPAG00000009252	pabpc4	88	44.821	Stegastes_partitus
ENSSSCG00000036170	-	95	44.781	ENSTGUG00000001266	PABPC4	89	44.444	Taeniopygia_guttata
ENSSSCG00000036170	-	96	43.540	ENSTRUG00000005907	pabpc4	88	43.540	Takifugu_rubripes
ENSSSCG00000036170	-	96	42.068	ENSTNIG00000016902	pabpc4	88	42.068	Tetraodon_nigroviridis
ENSSSCG00000036170	-	96	46.387	ENSTBEG00000009035	PABPC4	99	46.555	Tupaia_belangeri
ENSSSCG00000036170	-	96	46.379	ENSTTRG00000014340	PABPC4	99	46.379	Tursiops_truncatus
ENSSSCG00000036170	-	96	50.673	ENSUAMG00000000303	PABPC4	89	50.673	Ursus_americanus
ENSSSCG00000036170	-	96	50.505	ENSUMAG00000019585	PABPC4	100	50.505	Ursus_maritimus
ENSSSCG00000036170	-	96	50.673	ENSVVUG00000005215	PABPC4	89	50.673	Vulpes_vulpes
ENSSSCG00000036170	-	96	42.681	ENSXETG00000010946	pabpc4	95	42.602	Xenopus_tropicalis
ENSSSCG00000036170	-	96	45.063	ENSXCOG00000013190	pabpc4	95	44.704	Xiphophorus_couchianus
ENSSSCG00000036170	-	96	44.092	ENSXMAG00000019007	pabpc4	94	44.092	Xiphophorus_maculatus