EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000036316 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 5964 bases
Position: chrAEMK02000130.1:26837-32800
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000058575	CSD	PF00313.22	9.1e-26	1	1
ENSSSCP00000054325	CSD	PF00313.22	1.1e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000062242	-	552	-	ENSSSCP00000054325	183 (aa)	-	A0A287BCS6
ENSSSCT00000047353	-	519	-	ENSSSCP00000058575	172 (aa)	-	A0A287BQY7

Gene Model

Click here to download ENSSSCG00000036316's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000036316's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000036316	-	52	80.000	ENSSSCG00000000633	YBX3	63	56.061
ENSSSCG00000036316	-	95	99.387	ENSSSCG00000040331	-	94	100.000
ENSSSCG00000036316	-	65	49.107	ENSSSCG00000040884	-	53	42.683

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000036316	-	95	66.061	ENSBTAG00000045616	-	52	66.061	Bos_taurus
ENSSSCG00000036316	-	70	89.167	ENSCAFG00000016523	-	57	88.710	Canis_familiaris
ENSSSCG00000036316	-	97	82.249	ENSCAFG00000016520	-	55	82.081	Canis_familiaris
ENSSSCG00000036316	-	97	82.249	ENSCAFG00020010236	-	51	82.081	Canis_lupus_dingo
ENSSSCG00000036316	-	97	82.249	ENSCAFG00020010238	-	50	82.081	Canis_lupus_dingo
ENSSSCG00000036316	-	76	57.895	ENSOARG00000005470	-	54	60.938	Ovis_aries
ENSSSCG00000036316	-	66	53.982	ENSOARG00000004671	-	51	53.982	Ovis_aries
ENSSSCG00000036316	-	65	62.162	ENSOARG00000005509	-	54	62.281	Ovis_aries