EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000036336 (Gene tree)
Gene ID: 100525442
Gene Symbol: -
Alias: -
Full Name: polyadenylate-binding protein 1-like 2
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 603 bases
Position: chrX:58830477-58831079
Accession: 100525442
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000021034	RRM_1	PF00076.22	7.3e-43	1	2
ENSSSCP00000021034	RRM_1	PF00076.22	7.3e-43	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000025081	-	603	XM_013983715	ENSSSCP00000021034	200 (aa)	XP_013839169	F1RPL9

Gene Model

Click here to download ENSSSCG00000036336's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03013	RNA transport	KEGG
ssc03015	mRNA surveillance pathway	KEGG
ssc03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000036336's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000036336	-	98	51.282	ENSSSCG00000009067	PABPC4L	94	51.282
ENSSSCG00000036336	-	98	59.896	ENSSSCG00000040194	PABPC5	93	60.204
ENSSSCG00000036336	-	98	80.102	ENSSSCG00000006063	PABPC1	68	80.102
ENSSSCG00000036336	-	98	77.041	ENSSSCG00000003660	-	58	77.041
ENSSSCG00000036336	-	72	37.838	ENSSSCG00000021591	-	87	37.500
ENSSSCG00000036336	-	98	72.308	ENSSSCG00000007382	PABPC1L	60	72.308
ENSSSCG00000036336	-	100	100.000	ENSSSCG00000032167	-	100	100.000
ENSSSCG00000036336	-	85	33.553	ENSSSCG00000013592	ELAVL1	94	33.553
ENSSSCG00000036336	-	74	66.216	ENSSSCG00000033638	-	95	66.216
ENSSSCG00000036336	-	97	30.808	ENSSSCG00000023409	TIA1	67	30.808
ENSSSCG00000036336	-	79	34.167	ENSSSCG00000010685	-	75	32.203

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000036336	-	100	99.500	ENSG00000186288	PABPC1L2A	100	99.500	Homo_sapiens
ENSSSCG00000036336	-	100	99.500	ENSG00000184388	PABPC1L2B	100	99.500	Homo_sapiens
ENSSSCG00000036336	-	98	79.592	ENSAPOG00000017776	pabpc1b	60	79.592	Acanthochromis_polyacanthus
ENSSSCG00000036336	-	98	80.102	ENSAPOG00000015105	pabpc1a	58	80.102	Acanthochromis_polyacanthus
ENSSSCG00000036336	-	100	100.000	ENSAMEG00000019441	-	100	100.000	Ailuropoda_melanoleuca
ENSSSCG00000036336	-	98	78.571	ENSACIG00000018366	pabpc1b	59	78.571	Amphilophus_citrinellus
ENSSSCG00000036336	-	98	80.102	ENSACIG00000004685	pabpc1a	58	80.102	Amphilophus_citrinellus
ENSSSCG00000036336	-	98	80.102	ENSAOCG00000011656	pabpc1a	58	80.102	Amphiprion_ocellaris
ENSSSCG00000036336	-	98	80.102	ENSAOCG00000019839	pabpc1b	58	80.102	Amphiprion_ocellaris
ENSSSCG00000036336	-	98	80.102	ENSAPEG00000006963	pabpc1a	58	80.102	Amphiprion_percula
ENSSSCG00000036336	-	98	80.102	ENSAPEG00000010435	pabpc1b	58	80.102	Amphiprion_percula
ENSSSCG00000036336	-	98	80.102	ENSATEG00000024852	pabpc1a	58	80.102	Anabas_testudineus
ENSSSCG00000036336	-	98	79.082	ENSATEG00000012917	pabpc1b	58	79.082	Anabas_testudineus
ENSSSCG00000036336	-	100	99.500	ENSANAG00000019429	-	100	99.500	Aotus_nancymaae
ENSSSCG00000036336	-	100	99.500	ENSANAG00000019431	-	100	99.500	Aotus_nancymaae
ENSSSCG00000036336	-	98	80.102	ENSACLG00000009399	pabpc1a	68	78.889	Astatotilapia_calliptera
ENSSSCG00000036336	-	98	78.061	ENSACLG00000014335	pabpc1b	58	78.061	Astatotilapia_calliptera
ENSSSCG00000036336	-	98	79.592	ENSAMXG00000008599	pabpc1b	58	79.592	Astyanax_mexicanus
ENSSSCG00000036336	-	100	99.500	ENSBTAG00000052491	-	94	99.500	Bos_taurus
ENSSSCG00000036336	-	100	99.000	ENSBTAG00000050902	-	95	99.000	Bos_taurus
ENSSSCG00000036336	-	100	99.500	ENSCJAG00000041326	-	100	99.500	Callithrix_jacchus
ENSSSCG00000036336	-	100	100.000	ENSCAFG00020002052	-	96	100.000	Canis_lupus_dingo
ENSSSCG00000036336	-	100	99.500	ENSCHIG00000006283	-	100	99.500	Capra_hircus
ENSSSCG00000036336	-	100	100.000	ENSCHIG00000011138	-	100	100.000	Capra_hircus
ENSSSCG00000036336	-	100	100.000	ENSTSYG00000001775	-	100	100.000	Carlito_syrichta
ENSSSCG00000036336	-	100	99.500	ENSCPOG00000009525	-	100	99.500	Cavia_porcellus
ENSSSCG00000036336	-	100	99.500	ENSCCAG00000031524	-	100	99.500	Cebus_capucinus
ENSSSCG00000036336	-	100	99.500	ENSCATG00000042826	-	100	99.500	Cercocebus_atys
ENSSSCG00000036336	-	100	99.500	ENSCATG00000043125	-	100	99.500	Cercocebus_atys
ENSSSCG00000036336	-	100	96.000	ENSCLAG00000017409	-	100	96.000	Chinchilla_lanigera
ENSSSCG00000036336	-	100	96.000	ENSCLAG00000017412	-	100	96.000	Chinchilla_lanigera
ENSSSCG00000036336	-	100	99.500	ENSCSAG00000000102	-	100	99.500	Chlorocebus_sabaeus
ENSSSCG00000036336	-	99	92.965	ENSCGRG00001023387	-	98	92.965	Cricetulus_griseus_chok1gshd
ENSSSCG00000036336	-	98	79.082	ENSCSEG00000015241	-	58	79.082	Cynoglossus_semilaevis
ENSSSCG00000036336	-	98	80.102	ENSCSEG00000013324	pabpc1a	58	80.102	Cynoglossus_semilaevis
ENSSSCG00000036336	-	98	80.102	ENSCVAG00000021872	pabpc1a	58	80.102	Cyprinodon_variegatus
ENSSSCG00000036336	-	98	79.592	ENSCVAG00000005489	pabpc1b	58	79.592	Cyprinodon_variegatus
ENSSSCG00000036336	-	98	79.082	ENSDARG00000021140	pabpc1b	92	86.885	Danio_rerio
ENSSSCG00000036336	-	98	79.592	ENSDARG00000017219	pabpc1a	58	79.592	Danio_rerio
ENSSSCG00000036336	-	100	97.500	ENSDNOG00000030926	-	100	97.500	Dasypus_novemcinctus
ENSSSCG00000036336	-	100	97.000	ENSDORG00000011362	-	100	97.000	Dipodomys_ordii
ENSSSCG00000036336	-	100	99.500	ENSEASG00005010399	-	95	99.500	Equus_asinus_asinus
ENSSSCG00000036336	-	100	99.500	ENSECAG00000002620	-	95	99.500	Equus_caballus
ENSSSCG00000036336	-	100	95.000	ENSEEUG00000008203	-	100	95.000	Erinaceus_europaeus
ENSSSCG00000036336	-	98	80.102	ENSELUG00000015062	-	58	80.102	Esox_lucius
ENSSSCG00000036336	-	93	55.615	ENSELUG00000005389	-	78	55.615	Esox_lucius
ENSSSCG00000036336	-	98	79.592	ENSELUG00000003614	pabpc1a	58	79.592	Esox_lucius
ENSSSCG00000036336	-	100	100.000	ENSFCAG00000039701	-	100	100.000	Felis_catus
ENSSSCG00000036336	-	100	99.500	ENSFDAG00000005484	-	100	99.500	Fukomys_damarensis
ENSSSCG00000036336	-	98	80.102	ENSFHEG00000018979	pabpc1a	58	80.102	Fundulus_heteroclitus
ENSSSCG00000036336	-	98	79.082	ENSFHEG00000008186	pabpc1b	58	79.082	Fundulus_heteroclitus
ENSSSCG00000036336	-	98	79.592	ENSGMOG00000002448	-	57	79.592	Gadus_morhua
ENSSSCG00000036336	-	98	79.592	ENSGMOG00000013448	pabpc1a	57	79.592	Gadus_morhua
ENSSSCG00000036336	-	98	79.592	ENSGAFG00000010193	pabpc1b	60	79.592	Gambusia_affinis
ENSSSCG00000036336	-	98	80.102	ENSGAFG00000019750	pabpc1a	61	80.102	Gambusia_affinis
ENSSSCG00000036336	-	98	80.102	ENSGACG00000003572	pabpc1a	58	80.102	Gasterosteus_aculeatus
ENSSSCG00000036336	-	98	80.612	ENSGACG00000003771	pabpc1b	64	80.612	Gasterosteus_aculeatus
ENSSSCG00000036336	-	100	99.500	ENSGGOG00000043933	-	100	99.500	Gorilla_gorilla
ENSSSCG00000036336	-	100	99.500	ENSGGOG00000038606	-	100	99.500	Gorilla_gorilla
ENSSSCG00000036336	-	98	78.061	ENSHBUG00000002075	pabpc1b	60	78.061	Haplochromis_burtoni
ENSSSCG00000036336	-	98	80.102	ENSHBUG00000020487	pabpc1a	68	78.889	Haplochromis_burtoni
ENSSSCG00000036336	-	100	97.500	ENSHGLG00000019762	-	100	97.500	Heterocephalus_glaber_female
ENSSSCG00000036336	-	100	97.500	ENSHGLG00000019668	-	100	97.500	Heterocephalus_glaber_female
ENSSSCG00000036336	-	100	97.500	ENSHGLG00100020854	-	100	97.500	Heterocephalus_glaber_male
ENSSSCG00000036336	-	95	68.783	ENSHCOG00000003175	pabpc1b	69	67.500	Hippocampus_comes
ENSSSCG00000036336	-	98	80.102	ENSHCOG00000013502	pabpc1a	58	80.102	Hippocampus_comes
ENSSSCG00000036336	-	98	79.592	ENSIPUG00000008848	pabpc1a	59	79.592	Ictalurus_punctatus
ENSSSCG00000036336	-	98	60.309	ENSIPUG00000021244	-	52	60.309	Ictalurus_punctatus
ENSSSCG00000036336	-	98	79.592	ENSIPUG00000010791	-	61	79.592	Ictalurus_punctatus
ENSSSCG00000036336	-	100	99.000	ENSSTOG00000026028	-	100	99.000	Ictidomys_tridecemlineatus
ENSSSCG00000036336	-	100	99.000	ENSSTOG00000022096	-	100	99.000	Ictidomys_tridecemlineatus
ENSSSCG00000036336	-	100	97.500	ENSJJAG00000007037	-	100	97.500	Jaculus_jaculus
ENSSSCG00000036336	-	98	80.102	ENSKMAG00000000605	pabpc1a	58	80.102	Kryptolebias_marmoratus
ENSSSCG00000036336	-	98	79.082	ENSKMAG00000008049	pabpc1b	63	79.082	Kryptolebias_marmoratus
ENSSSCG00000036336	-	98	80.102	ENSLBEG00000026845	pabpc1b	58	80.102	Labrus_bergylta
ENSSSCG00000036336	-	98	80.102	ENSLBEG00000024002	-	58	80.102	Labrus_bergylta
ENSSSCG00000036336	-	99	97.487	ENSLAFG00000023096	-	99	97.487	Loxodonta_africana
ENSSSCG00000036336	-	100	99.005	ENSMFAG00000028878	-	100	99.005	Macaca_fascicularis
ENSSSCG00000036336	-	100	99.500	ENSMMUG00000009740	-	100	99.500	Macaca_mulatta
ENSSSCG00000036336	-	100	99.500	ENSMMUG00000039929	-	100	99.500	Macaca_mulatta
ENSSSCG00000036336	-	100	99.500	ENSMMUG00000037681	-	100	99.500	Macaca_mulatta
ENSSSCG00000036336	-	100	99.500	ENSMNEG00000037732	-	100	99.500	Macaca_nemestrina
ENSSSCG00000036336	-	100	99.500	ENSMLEG00000027495	-	100	99.500	Mandrillus_leucophaeus
ENSSSCG00000036336	-	98	79.082	ENSMAMG00000014610	pabpc1b	59	79.082	Mastacembelus_armatus
ENSSSCG00000036336	-	98	80.102	ENSMAMG00000004502	-	68	78.889	Mastacembelus_armatus
ENSSSCG00000036336	-	98	78.061	ENSMZEG00005026745	pabpc1b	58	78.061	Maylandia_zebra
ENSSSCG00000036336	-	98	80.102	ENSMZEG00005025416	pabpc1a	68	78.889	Maylandia_zebra
ENSSSCG00000036336	-	100	99.500	ENSMICG00000047642	-	100	99.500	Microcebus_murinus
ENSSSCG00000036336	-	98	80.102	ENSMMOG00000018009	pabpc1b	62	80.102	Mola_mola
ENSSSCG00000036336	-	98	80.102	ENSMMOG00000018044	pabpc1a	68	78.889	Mola_mola
ENSSSCG00000036336	-	98	67.179	ENSMODG00000015024	-	57	67.179	Monodelphis_domestica
ENSSSCG00000036336	-	98	73.980	ENSMODG00000013156	-	58	73.980	Monodelphis_domestica
ENSSSCG00000036336	-	98	79.082	ENSMALG00000006066	pabpc1b	63	79.082	Monopterus_albus
ENSSSCG00000036336	-	98	80.102	ENSMALG00000013020	-	62	80.102	Monopterus_albus
ENSSSCG00000036336	-	100	97.000	ENSNGAG00000012688	-	100	97.000	Nannospalax_galili
ENSSSCG00000036336	-	98	80.102	ENSNBRG00000003068	-	68	78.889	Neolamprologus_brichardi
ENSSSCG00000036336	-	98	78.061	ENSNBRG00000013737	pabpc1b	62	78.061	Neolamprologus_brichardi
ENSSSCG00000036336	-	100	99.500	ENSNLEG00000018128	-	100	99.500	Nomascus_leucogenys
ENSSSCG00000036336	-	100	97.000	ENSODEG00000018540	-	100	97.000	Octodon_degus
ENSSSCG00000036336	-	98	80.102	ENSONIG00000006871	-	58	80.102	Oreochromis_niloticus
ENSSSCG00000036336	-	98	78.061	ENSONIG00000002717	pabpc1b	58	78.061	Oreochromis_niloticus
ENSSSCG00000036336	-	100	100.000	ENSOCUG00000002565	-	100	100.000	Oryctolagus_cuniculus
ENSSSCG00000036336	-	98	80.102	ENSORLG00000002691	pabpc1a	68	78.889	Oryzias_latipes
ENSSSCG00000036336	-	98	77.041	ENSORLG00000003008	-	58	77.041	Oryzias_latipes
ENSSSCG00000036336	-	98	80.102	ENSORLG00020022398	pabpc1a	58	80.102	Oryzias_latipes_hni
ENSSSCG00000036336	-	98	77.041	ENSORLG00020022259	-	58	77.041	Oryzias_latipes_hni
ENSSSCG00000036336	-	98	80.102	ENSORLG00015013633	pabpc1	58	80.102	Oryzias_latipes_hsok
ENSSSCG00000036336	-	98	77.041	ENSORLG00015010932	-	58	77.041	Oryzias_latipes_hsok
ENSSSCG00000036336	-	98	80.102	ENSOMEG00000020219	pabpc1a	58	80.102	Oryzias_melastigma
ENSSSCG00000036336	-	98	76.667	ENSOMEG00000013627	pabpc1b	67	76.667	Oryzias_melastigma
ENSSSCG00000036336	-	100	99.500	ENSOGAG00000026047	-	100	99.500	Otolemur_garnettii
ENSSSCG00000036336	-	100	99.500	ENSOGAG00000029513	-	100	99.500	Otolemur_garnettii
ENSSSCG00000036336	-	100	99.500	ENSOARG00000005943	-	100	99.500	Ovis_aries
ENSSSCG00000036336	-	100	99.500	ENSPPAG00000012920	-	100	99.500	Pan_paniscus
ENSSSCG00000036336	-	100	100.000	ENSPPRG00000011804	-	100	100.000	Panthera_pardus
ENSSSCG00000036336	-	100	100.000	ENSPPRG00000011809	-	100	100.000	Panthera_pardus
ENSSSCG00000036336	-	100	99.500	ENSPTRG00000028252	-	100	99.500	Pan_troglodytes
ENSSSCG00000036336	-	100	99.500	ENSPANG00000011549	-	100	99.500	Papio_anubis
ENSSSCG00000036336	-	98	79.592	ENSPKIG00000005676	pabpc1b	58	79.592	Paramormyrops_kingsleyae
ENSSSCG00000036336	-	98	79.592	ENSPMGG00000023134	-	79	79.592	Periophthalmus_magnuspinnatus
ENSSSCG00000036336	-	98	79.082	ENSPMGG00000022487	pabpc1a	76	79.082	Periophthalmus_magnuspinnatus
ENSSSCG00000036336	-	98	79.082	ENSPFOG00000005917	pabpc1b	58	79.082	Poecilia_formosa
ENSSSCG00000036336	-	98	80.102	ENSPFOG00000010815	pabpc1a	57	80.102	Poecilia_formosa
ENSSSCG00000036336	-	98	79.592	ENSPLAG00000001388	pabpc1b	58	79.592	Poecilia_latipinna
ENSSSCG00000036336	-	98	80.102	ENSPLAG00000004114	pabpc1a	58	80.102	Poecilia_latipinna
ENSSSCG00000036336	-	98	80.102	ENSPMEG00000001334	pabpc1a	58	80.102	Poecilia_mexicana
ENSSSCG00000036336	-	98	79.082	ENSPMEG00000014399	pabpc1b	58	79.082	Poecilia_mexicana
ENSSSCG00000036336	-	98	79.592	ENSPREG00000010911	pabpc1b	60	79.592	Poecilia_reticulata
ENSSSCG00000036336	-	98	80.102	ENSPREG00000019595	pabpc1a	92	86.885	Poecilia_reticulata
ENSSSCG00000036336	-	100	99.500	ENSPPYG00000020468	-	100	99.500	Pongo_abelii
ENSSSCG00000036336	-	100	99.000	ENSPCAG00000005308	-	100	99.000	Procavia_capensis
ENSSSCG00000036336	-	100	99.000	ENSPCOG00000026349	-	100	99.000	Propithecus_coquereli
ENSSSCG00000036336	-	100	96.000	ENSPVAG00000016117	-	100	96.000	Pteropus_vampyrus
ENSSSCG00000036336	-	98	78.061	ENSPNYG00000012578	pabpc1b	60	78.061	Pundamilia_nyererei
ENSSSCG00000036336	-	98	80.102	ENSPNYG00000005192	pabpc1a	61	78.889	Pundamilia_nyererei
ENSSSCG00000036336	-	98	80.102	ENSPNAG00000024626	pabpc1b	58	80.102	Pygocentrus_nattereri
ENSSSCG00000036336	-	98	78.571	ENSPNAG00000028408	pabpc1a	64	78.571	Pygocentrus_nattereri
ENSSSCG00000036336	-	100	99.500	ENSRBIG00000027173	-	100	99.500	Rhinopithecus_bieti
ENSSSCG00000036336	-	99	78.680	ENSRBIG00000028738	-	69	78.680	Rhinopithecus_bieti
ENSSSCG00000036336	-	100	99.500	ENSRROG00000017404	-	100	99.500	Rhinopithecus_roxellana
ENSSSCG00000036336	-	98	69.388	ENSSHAG00000000511	-	59	69.388	Sarcophilus_harrisii
ENSSSCG00000036336	-	98	80.102	ENSSFOG00015002752	-	58	80.102	Scleropages_formosus
ENSSSCG00000036336	-	98	80.102	ENSSFOG00015006662	pabpc1a	58	80.102	Scleropages_formosus
ENSSSCG00000036336	-	87	68.966	ENSSFOG00015019668	-	67	68.966	Scleropages_formosus
ENSSSCG00000036336	-	98	80.102	ENSSMAG00000010803	pabpc1a	58	80.102	Scophthalmus_maximus
ENSSSCG00000036336	-	98	79.082	ENSSMAG00000006869	pabpc1b	58	79.082	Scophthalmus_maximus
ENSSSCG00000036336	-	98	80.102	ENSSDUG00000006675	pabpc1a	58	80.102	Seriola_dumerili
ENSSSCG00000036336	-	98	79.592	ENSSDUG00000011965	pabpc1b	58	79.592	Seriola_dumerili
ENSSSCG00000036336	-	98	79.592	ENSSLDG00000014156	pabpc1b	58	79.592	Seriola_lalandi_dorsalis
ENSSSCG00000036336	-	98	80.102	ENSSLDG00000011661	pabpc1a	58	80.102	Seriola_lalandi_dorsalis
ENSSSCG00000036336	-	98	79.592	ENSSPAG00000019265	pabpc1b	63	79.592	Stegastes_partitus
ENSSSCG00000036336	-	98	80.102	ENSSPAG00000014453	-	58	80.102	Stegastes_partitus
ENSSSCG00000036336	-	98	80.102	ENSTRUG00000003767	-	59	80.102	Takifugu_rubripes
ENSSSCG00000036336	-	98	80.102	ENSTRUG00000011577	-	58	80.102	Takifugu_rubripes
ENSSSCG00000036336	-	98	80.612	ENSTNIG00000009153	pabpc1b	58	80.612	Tetraodon_nigroviridis
ENSSSCG00000036336	-	98	75.743	ENSTNIG00000013307	pabpc1a	58	75.743	Tetraodon_nigroviridis
ENSSSCG00000036336	-	100	100.000	ENSTTRG00000013181	-	100	100.000	Tursiops_truncatus
ENSSSCG00000036336	-	100	100.000	ENSUAMG00000008089	-	100	100.000	Ursus_americanus
ENSSSCG00000036336	-	100	100.000	ENSUMAG00000003364	-	100	100.000	Ursus_maritimus
ENSSSCG00000036336	-	99	57.868	ENSUMAG00000023926	-	88	57.360	Ursus_maritimus
ENSSSCG00000036336	-	100	99.500	ENSVVUG00000015892	-	97	99.500	Vulpes_vulpes
ENSSSCG00000036336	-	98	80.102	ENSXCOG00000017066	pabpc1a	61	80.102	Xiphophorus_couchianus
ENSSSCG00000036336	-	98	79.592	ENSXCOG00000019901	pabpc1b	60	79.592	Xiphophorus_couchianus
ENSSSCG00000036336	-	98	80.102	ENSXMAG00000002555	pabpc1a	60	80.102	Xiphophorus_maculatus
ENSSSCG00000036336	-	98	79.592	ENSXMAG00000003753	pabpc1b	89	79.592	Xiphophorus_maculatus