EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSSSCG00000036592 (Gene tree)
Gene ID: 768117
Gene Symbol: -
Alias: PR264|SC-35|SC35|SFRS2|SFRS2A
Full Name: serine and arginine rich splicing factor 2
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 3943 bases
Position: chr12:4800594-4804536
Accession: 768117
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000032453	RRM_1	PF00076.22	8.1e-22	1	1
ENSSSCP00000040547	RRM_1	PF00076.22	8.1e-22	1	1
ENSSSCP00000041853	RRM_1	PF00076.22	8.1e-22	1	1
ENSSSCP00000048729	RRM_1	PF00076.22	8.1e-22	1	1
ENSSSCP00000049300	RRM_1	PF00076.22	8.1e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000061735	-	1452	XM_021066263	ENSSSCP00000048729	221 (aa)	XP_020921922	Q06A98
ENSSSCT00000061170	-	3140	-	ENSSSCP00000049300	221 (aa)	-	Q06A98
ENSSSCT00000060921	-	2627	-	ENSSSCP00000041853	221 (aa)	-	Q06A98
ENSSSCT00000048281	-	2064	XM_021066262	ENSSSCP00000032453	221 (aa)	XP_020921921	Q06A98
ENSSSCT00000065251	-	1558	-	ENSSSCP00000040547	221 (aa)	-	Q06A98

Gene Model

Click here to download ENSSSCG00000036592's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03040	Spliceosome	KEGG
ssc05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000036592's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000036592	-	64	67.832	ENSSSCG00000012212	-	51	77.000
ENSSSCG00000036592	-	53	37.692	ENSSSCG00000008484	SRSF7	64	39.130

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000036592	-	100	99.548	ENSG00000161547	SRSF2	100	99.548	Homo_sapiens
ENSSSCG00000036592	-	100	98.643	ENSACAG00000008553	-	100	98.643	Anolis_carolinensis
ENSSSCG00000036592	-	100	99.548	ENSANAG00000004226	SRSF2	100	99.548	Aotus_nancymaae
ENSSSCG00000036592	-	100	99.548	ENSBTAG00000018258	SRSF2	100	99.548	Bos_taurus
ENSSSCG00000036592	-	100	99.548	ENSCJAG00000041154	SRSF2	100	99.548	Callithrix_jacchus
ENSSSCG00000036592	-	100	99.095	ENSCAFG00000005147	SRSF2	100	99.095	Canis_familiaris
ENSSSCG00000036592	-	100	99.548	ENSCAFG00020006267	-	100	99.548	Canis_lupus_dingo
ENSSSCG00000036592	-	100	99.548	ENSCHIG00000017001	-	100	99.548	Capra_hircus
ENSSSCG00000036592	-	50	100.000	ENSTSYG00000006517	-	50	100.000	Carlito_syrichta
ENSSSCG00000036592	-	100	99.548	ENSCCAG00000037532	SRSF2	100	99.548	Cebus_capucinus
ENSSSCG00000036592	-	100	99.548	ENSCATG00000033650	SRSF2	100	99.548	Cercocebus_atys
ENSSSCG00000036592	-	100	99.548	ENSCSAG00000005108	SRSF2	100	99.548	Chlorocebus_sabaeus
ENSSSCG00000036592	-	100	99.548	ENSCPBG00000027975	-	100	99.548	Chrysemys_picta_bellii
ENSSSCG00000036592	-	100	99.548	ENSCANG00000028176	SRSF2	100	99.548	Colobus_angolensis_palliatus
ENSSSCG00000036592	-	100	99.548	ENSCGRG00001023483	Srsf2	100	99.548	Cricetulus_griseus_chok1gshd
ENSSSCG00000036592	-	54	94.167	ENSDARG00000057484	srsf2a	85	96.000	Danio_rerio
ENSSSCG00000036592	-	100	99.548	ENSDNOG00000000439	-	100	99.548	Dasypus_novemcinctus
ENSSSCG00000036592	-	100	99.548	ENSEASG00005004319	-	100	99.548	Equus_asinus_asinus
ENSSSCG00000036592	-	100	99.548	ENSECAG00000033515	-	100	99.548	Equus_caballus
ENSSSCG00000036592	-	100	99.548	ENSFCAG00000043466	-	100	99.548	Felis_catus
ENSSSCG00000036592	-	100	98.190	ENSGALG00000017357	SRSF2	100	98.190	Gallus_gallus
ENSSSCG00000036592	-	100	99.548	ENSGAGG00000024457	-	100	99.548	Gopherus_agassizii
ENSSSCG00000036592	-	100	92.308	ENSGGOG00000014378	SRSF2	100	92.308	Gorilla_gorilla
ENSSSCG00000036592	-	100	99.548	ENSHGLG00000017262	-	100	99.548	Heterocephalus_glaber_female
ENSSSCG00000036592	-	100	99.548	ENSJJAG00000013794	Srsf2	100	99.548	Jaculus_jaculus
ENSSSCG00000036592	-	51	95.536	ENSLACG00000013394	srsf2a	51	95.536	Latimeria_chalumnae
ENSSSCG00000036592	-	100	99.548	ENSMFAG00000045524	SRSF2	100	99.548	Macaca_fascicularis
ENSSSCG00000036592	-	100	94.118	ENSMMUG00000022413	SRSF2	100	94.118	Macaca_mulatta
ENSSSCG00000036592	-	100	99.548	ENSMNEG00000031444	SRSF2	100	99.548	Macaca_nemestrina
ENSSSCG00000036592	-	100	99.548	ENSMAUG00000022242	Srsf2	100	99.548	Mesocricetus_auratus
ENSSSCG00000036592	-	100	99.548	ENSMICG00000016956	-	100	99.548	Microcebus_murinus
ENSSSCG00000036592	-	99	98.174	ENSMODG00000001575	-	86	98.174	Monodelphis_domestica
ENSSSCG00000036592	-	100	99.548	MGP_CAROLIEiJ_G0017457	Srsf2	100	99.548	Mus_caroli
ENSSSCG00000036592	-	100	99.548	ENSMUSG00000034120	Srsf2	100	99.548	Mus_musculus
ENSSSCG00000036592	-	100	99.548	MGP_PahariEiJ_G0018587	Srsf2	100	99.548	Mus_pahari
ENSSSCG00000036592	-	100	99.548	MGP_SPRETEiJ_G0018303	Srsf2	100	99.548	Mus_spretus
ENSSSCG00000036592	-	100	99.548	ENSNGAG00000021718	Srsf2	100	99.548	Nannospalax_galili
ENSSSCG00000036592	-	50	100.000	ENSNLEG00000002547	SRSF2	51	100.000	Nomascus_leucogenys
ENSSSCG00000036592	-	100	99.548	ENSMEUG00000016745	-	100	99.548	Notamacropus_eugenii
ENSSSCG00000036592	-	100	99.548	ENSODEG00000014748	-	100	99.548	Octodon_degus
ENSSSCG00000036592	-	54	100.000	ENSOANG00000002695	-	100	100.000	Ornithorhynchus_anatinus
ENSSSCG00000036592	-	100	99.548	ENSOGAG00000028335	-	100	99.548	Otolemur_garnettii
ENSSSCG00000036592	-	99	49.545	ENSOARG00000018667	-	50	73.000	Ovis_aries
ENSSSCG00000036592	-	99	49.545	ENSOARG00000018359	-	50	73.000	Ovis_aries
ENSSSCG00000036592	-	100	99.548	ENSPPAG00000031433	SRSF2	100	99.548	Pan_paniscus
ENSSSCG00000036592	-	100	99.548	ENSPTRG00000009692	SRSF2	100	99.548	Pan_troglodytes
ENSSSCG00000036592	-	100	99.548	ENSPANG00000020023	SRSF2	100	99.548	Papio_anubis
ENSSSCG00000036592	-	100	99.548	ENSPCIG00000005334	-	100	99.548	Phascolarctos_cinereus
ENSSSCG00000036592	-	100	99.548	ENSPPYG00000008668	SRSF2	100	99.548	Pongo_abelii
ENSSSCG00000036592	-	100	99.548	ENSPCOG00000023806	-	100	99.548	Propithecus_coquereli
ENSSSCG00000036592	-	54	100.000	ENSPVAG00000014264	-	100	100.000	Pteropus_vampyrus
ENSSSCG00000036592	-	100	99.548	ENSRNOG00000000248	Srsf2	100	99.548	Rattus_norvegicus
ENSSSCG00000036592	-	100	99.548	ENSRBIG00000034493	SRSF2	100	99.548	Rhinopithecus_bieti
ENSSSCG00000036592	-	100	99.548	ENSRROG00000042457	SRSF2	100	99.548	Rhinopithecus_roxellana
ENSSSCG00000036592	-	100	88.235	ENSSBOG00000030904	SRSF2	100	88.235	Saimiri_boliviensis_boliviensis
ENSSSCG00000036592	-	100	99.099	ENSSHAG00000005932	-	100	99.099	Sarcophilus_harrisii
ENSSSCG00000036592	-	51	94.643	ENSSFOG00015003975	-	54	87.705	Scleropages_formosus
ENSSSCG00000036592	-	100	93.213	ENSSPUG00000007582	-	100	93.213	Sphenodon_punctatus
ENSSSCG00000036592	-	100	98.190	ENSTGUG00000007799	-	100	98.190	Taeniopygia_guttata
ENSSSCG00000036592	-	100	99.548	ENSTBEG00000014339	-	100	99.548	Tupaia_belangeri
ENSSSCG00000036592	-	100	99.548	ENSUAMG00000013403	-	100	99.548	Ursus_americanus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005681	spliceosomal complex	-	IEA	Component
GO:0036002	pre-mRNA binding	-	IEA	Function