EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000036595 (Gene tree)
Gene ID: 100625315
Gene Symbol: -
Alias: -
Full Name: zinc finger CCCH-type and G-patch domain containing
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 20848 bases
Position: chr17:62635018-62655865
Accession: 100625315
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000042308	zf-CCCH	PF00642.24	0.00044	1	1
ENSSSCP00000045305	zf-CCCH	PF00642.24	0.00044	1	1
ENSSSCP00000028003	zf-CCCH	PF00642.24	0.00046	1	1
ENSSSCP00000038874	zf-CCCH	PF00642.24	0.00046	1	1
ENSSSCP00000042308	G-patch	PF01585.23	6.5e-12	1	1
ENSSSCP00000045305	G-patch	PF01585.23	6.5e-12	1	1
ENSSSCP00000028003	G-patch	PF01585.23	6.5e-12	1	1
ENSSSCP00000038874	G-patch	PF01585.23	6.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000044674	-	5816	-	ENSSSCP00000042308	494 (aa)	-	A0A287AEP2
ENSSSCT00000029862	-	2507	-	ENSSSCP00000028003	513 (aa)	-	I3LV51
ENSSSCT00000040269	-	5699	XM_021078372	ENSSSCP00000038874	513 (aa)	XP_020934031	I3LV51
ENSSSCT00000052751	-	5530	-	ENSSSCP00000045305	494 (aa)	-	A0A287AEP2

Gene Model

Click here to download ENSSSCG00000036595's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000036595's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000036595	-	100	78.641	ENSG00000197114	ZGPAT	100	78.641	Homo_sapiens
ENSSSCG00000036595	-	100	52.256	ENSAPOG00000001732	zgpat	100	51.412	Acanthochromis_polyacanthus
ENSSSCG00000036595	-	100	85.243	ENSAMEG00000001752	-	100	84.272	Ailuropoda_melanoleuca
ENSSSCG00000036595	-	100	51.692	ENSACIG00000015939	zgpat	100	49.909	Amphilophus_citrinellus
ENSSSCG00000036595	-	100	52.632	ENSAOCG00000014437	zgpat	100	51.789	Amphiprion_ocellaris
ENSSSCG00000036595	-	100	52.174	ENSAPEG00000006555	zgpat	100	51.977	Amphiprion_percula
ENSSSCG00000036595	-	100	52.060	ENSATEG00000003346	zgpat	100	51.224	Anabas_testudineus
ENSSSCG00000036595	-	100	66.157	ENSAPLG00000014707	-	100	65.583	Anas_platyrhynchos
ENSSSCG00000036595	-	95	61.741	ENSACAG00000012278	-	100	61.460	Anolis_carolinensis
ENSSSCG00000036595	-	100	79.922	ENSANAG00000035708	ZGPAT	100	80.117	Aotus_nancymaae
ENSSSCG00000036595	-	100	51.769	ENSACLG00000013778	zgpat	100	51.397	Astatotilapia_calliptera
ENSSSCG00000036595	-	100	48.507	ENSAMXG00000018583	zgpat	100	47.842	Astyanax_mexicanus
ENSSSCG00000036595	-	100	86.770	ENSBTAG00000007498	ZGPAT	100	86.965	Bos_taurus
ENSSSCG00000036595	-	100	77.563	ENSCJAG00000010398	ZGPAT	100	78.143	Callithrix_jacchus
ENSSSCG00000036595	-	99	81.467	ENSCAFG00000013056	ZGPAT	99	79.730	Canis_familiaris
ENSSSCG00000036595	-	100	82.081	ENSCAFG00020001956	-	100	79.961	Canis_lupus_dingo
ENSSSCG00000036595	-	100	86.576	ENSCHIG00000026209	-	100	86.965	Capra_hircus
ENSSSCG00000036595	-	96	75.904	ENSTSYG00000000795	ZGPAT	97	75.904	Carlito_syrichta
ENSSSCG00000036595	-	62	65.094	ENSCAPG00000009466	-	100	66.352	Cavia_aperea
ENSSSCG00000036595	-	100	77.432	ENSCPOG00000014427	ZGPAT	100	76.848	Cavia_porcellus
ENSSSCG00000036595	-	100	78.752	ENSCCAG00000035441	ZGPAT	100	79.337	Cebus_capucinus
ENSSSCG00000036595	-	100	78.016	ENSCATG00000034076	ZGPAT	100	78.405	Cercocebus_atys
ENSSSCG00000036595	-	100	80.545	ENSCLAG00000004087	ZGPAT	100	80.156	Chinchilla_lanigera
ENSSSCG00000036595	-	100	75.281	ENSCSAG00000016628	ZGPAT	100	75.468	Chlorocebus_sabaeus
ENSSSCG00000036595	-	67	69.065	ENSCHOG00000013646	-	84	68.345	Choloepus_hoffmanni
ENSSSCG00000036595	-	100	63.080	ENSCPBG00000014736	-	99	61.273	Chrysemys_picta_bellii
ENSSSCG00000036595	-	100	78.210	ENSCANG00000041082	ZGPAT	100	78.210	Colobus_angolensis_palliatus
ENSSSCG00000036595	-	100	77.388	ENSCGRG00001011442	Zgpat	100	76.803	Cricetulus_griseus_chok1gshd
ENSSSCG00000036595	-	100	69.201	ENSCGRG00000014321	Zgpat	100	68.616	Cricetulus_griseus_crigri
ENSSSCG00000036595	-	100	50.575	ENSCSEG00000002301	zgpat	100	48.785	Cynoglossus_semilaevis
ENSSSCG00000036595	-	100	51.220	ENSCVAG00000007255	zgpat	100	49.077	Cyprinodon_variegatus
ENSSSCG00000036595	-	100	48.197	ENSDARG00000027403	zgpat	100	47.538	Danio_rerio
ENSSSCG00000036595	-	100	80.000	ENSDNOG00000025874	-	100	80.194	Dasypus_novemcinctus
ENSSSCG00000036595	-	96	77.755	ENSDORG00000001360	Zgpat	100	76.939	Dipodomys_ordii
ENSSSCG00000036595	-	93	40.038	ENSEBUG00000009006	ZGPAT	99	38.899	Eptatretus_burgeri
ENSSSCG00000036595	-	100	74.427	ENSEASG00005023159	-	100	74.427	Equus_asinus_asinus
ENSSSCG00000036595	-	100	76.998	ENSECAG00000019674	-	100	76.998	Equus_caballus
ENSSSCG00000036595	-	100	51.201	ENSELUG00000003733	zgpat	100	49.907	Esox_lucius
ENSSSCG00000036595	-	100	84.211	ENSFCAG00000001173	-	100	84.016	Felis_catus
ENSSSCG00000036595	-	100	62.915	ENSFALG00000005924	-	100	63.284	Ficedula_albicollis
ENSSSCG00000036595	-	100	78.947	ENSFDAG00000002974	ZGPAT	100	78.947	Fukomys_damarensis
ENSSSCG00000036595	-	100	51.941	ENSFHEG00000009966	zgpat	100	51.577	Fundulus_heteroclitus
ENSSSCG00000036595	-	100	61.510	ENSGALG00000006092	-	100	62.063	Gallus_gallus
ENSSSCG00000036595	-	100	49.905	ENSGAFG00000020149	zgpat	100	49.254	Gambusia_affinis
ENSSSCG00000036595	-	100	49.534	ENSGACG00000004662	zgpat	100	48.315	Gasterosteus_aculeatus
ENSSSCG00000036595	-	100	62.662	ENSGAGG00000019510	-	99	60.830	Gopherus_agassizii
ENSSSCG00000036595	-	100	75.701	ENSGGOG00000004801	ZGPAT	100	75.701	Gorilla_gorilla
ENSSSCG00000036595	-	100	51.397	ENSHBUG00000010362	zgpat	100	51.210	Haplochromis_burtoni
ENSSSCG00000036595	-	100	75.000	ENSHGLG00000014870	ZGPAT	100	76.145	Heterocephalus_glaber_female
ENSSSCG00000036595	-	100	76.998	ENSHGLG00100003927	ZGPAT	100	78.168	Heterocephalus_glaber_male
ENSSSCG00000036595	-	100	49.526	ENSHCOG00000004674	zgpat	100	48.491	Hippocampus_comes
ENSSSCG00000036595	-	100	49.522	ENSIPUG00000012890	zgpat	100	48.224	Ictalurus_punctatus
ENSSSCG00000036595	-	95	75.051	ENSSTOG00000011986	ZGPAT	100	75.869	Ictidomys_tridecemlineatus
ENSSSCG00000036595	-	100	76.803	ENSJJAG00000018714	-	100	76.608	Jaculus_jaculus
ENSSSCG00000036595	-	100	69.201	ENSJJAG00000008007	-	100	69.201	Jaculus_jaculus
ENSSSCG00000036595	-	100	49.907	ENSKMAG00000006523	zgpat	100	49.438	Kryptolebias_marmoratus
ENSSSCG00000036595	-	100	50.466	ENSLBEG00000016259	zgpat	100	49.907	Labrus_bergylta
ENSSSCG00000036595	-	100	56.481	ENSLACG00000002661	zgpat	100	55.741	Latimeria_chalumnae
ENSSSCG00000036595	-	100	55.910	ENSLOCG00000001659	zgpat	100	56.489	Lepisosteus_oculatus
ENSSSCG00000036595	-	100	78.016	ENSMFAG00000001467	ZGPAT	100	78.210	Macaca_fascicularis
ENSSSCG00000036595	-	100	77.821	ENSMMUG00000000171	ZGPAT	100	78.016	Macaca_mulatta
ENSSSCG00000036595	-	100	77.821	ENSMNEG00000019568	ZGPAT	100	78.016	Macaca_nemestrina
ENSSSCG00000036595	-	100	78.016	ENSMLEG00000035416	ZGPAT	100	78.210	Mandrillus_leucophaeus
ENSSSCG00000036595	-	100	51.487	ENSMAMG00000008266	zgpat	100	50.000	Mastacembelus_armatus
ENSSSCG00000036595	-	100	51.685	ENSMZEG00005021620	zgpat	100	51.498	Maylandia_zebra
ENSSSCG00000036595	-	100	59.227	ENSMGAG00000006823	-	100	60.000	Meleagris_gallopavo
ENSSSCG00000036595	-	100	76.998	ENSMAUG00000017248	Zgpat	100	76.413	Mesocricetus_auratus
ENSSSCG00000036595	-	100	82.136	ENSMICG00000033269	ZGPAT	100	81.165	Microcebus_murinus
ENSSSCG00000036595	-	100	77.778	ENSMOCG00000001324	Zgpat	100	77.193	Microtus_ochrogaster
ENSSSCG00000036595	-	100	51.948	ENSMMOG00000014951	zgpat	100	52.052	Mola_mola
ENSSSCG00000036595	-	95	67.223	ENSMODG00000017016	-	88	65.979	Monodelphis_domestica
ENSSSCG00000036595	-	100	48.052	ENSMALG00000006584	zgpat	100	47.761	Monopterus_albus
ENSSSCG00000036595	-	100	78.058	MGP_CAROLIEiJ_G0024806	Zgpat	100	78.058	Mus_caroli
ENSSSCG00000036595	-	100	78.168	ENSMUSG00000027582	Zgpat	100	77.973	Mus_musculus
ENSSSCG00000036595	-	100	78.016	MGP_PahariEiJ_G0026254	Zgpat	100	77.821	Mus_pahari
ENSSSCG00000036595	-	100	77.388	MGP_SPRETEiJ_G0025732	Zgpat	100	77.778	Mus_spretus
ENSSSCG00000036595	-	100	80.447	ENSMLUG00000005264	-	100	80.074	Myotis_lucifugus
ENSSSCG00000036595	-	100	50.467	ENSNBRG00000021521	zgpat	100	50.093	Neolamprologus_brichardi
ENSSSCG00000036595	-	100	75.283	ENSNLEG00000010146	ZGPAT	100	75.472	Nomascus_leucogenys
ENSSSCG00000036595	-	89	58.797	ENSMEUG00000011946	-	100	58.259	Notamacropus_eugenii
ENSSSCG00000036595	-	62	74.074	ENSOPRG00000002115	-	100	74.074	Ochotona_princeps
ENSSSCG00000036595	-	100	78.558	ENSODEG00000006562	ZGPAT	100	78.558	Octodon_degus
ENSSSCG00000036595	-	100	52.142	ENSONIG00000009365	zgpat	100	51.955	Oreochromis_niloticus
ENSSSCG00000036595	-	100	68.441	ENSOANG00000004932	-	100	68.441	Ornithorhynchus_anatinus
ENSSSCG00000036595	-	62	77.581	ENSOCUG00000008687	-	100	77.581	Oryctolagus_cuniculus
ENSSSCG00000036595	-	100	54.340	ENSORLG00000000880	zgpat	100	51.887	Oryzias_latipes
ENSSSCG00000036595	-	100	53.396	ENSORLG00020004339	zgpat	100	52.642	Oryzias_latipes_hni
ENSSSCG00000036595	-	100	53.208	ENSORLG00015018532	zgpat	100	52.453	Oryzias_latipes_hsok
ENSSSCG00000036595	-	100	53.008	ENSOMEG00000014655	zgpat	100	51.880	Oryzias_melastigma
ENSSSCG00000036595	-	100	78.227	ENSOGAG00000034509	ZGPAT	100	77.457	Otolemur_garnettii
ENSSSCG00000036595	-	100	79.633	ENSOARG00000010128	ZGPAT	100	79.817	Ovis_aries
ENSSSCG00000036595	-	100	77.282	ENSPPAG00000027831	ZGPAT	100	76.699	Pan_paniscus
ENSSSCG00000036595	-	100	84.405	ENSPPRG00000024151	-	100	84.016	Panthera_pardus
ENSSSCG00000036595	-	100	84.405	ENSPTIG00000020325	-	100	84.016	Panthera_tigris_altaica
ENSSSCG00000036595	-	100	77.476	ENSPTRG00000013750	ZGPAT	100	76.893	Pan_troglodytes
ENSSSCG00000036595	-	100	75.141	ENSPANG00000005904	ZGPAT	100	74.906	Papio_anubis
ENSSSCG00000036595	-	100	51.287	ENSPKIG00000012056	zgpat	100	51.197	Paramormyrops_kingsleyae
ENSSSCG00000036595	-	100	63.636	ENSPSIG00000015801	-	100	61.913	Pelodiscus_sinensis
ENSSSCG00000036595	-	100	52.174	ENSPMGG00000014856	zgpat	100	51.141	Periophthalmus_magnuspinnatus
ENSSSCG00000036595	-	100	77.778	ENSPEMG00000015676	Zgpat	100	77.583	Peromyscus_maniculatus_bairdii
ENSSSCG00000036595	-	100	68.069	ENSPCIG00000017922	-	100	66.667	Phascolarctos_cinereus
ENSSSCG00000036595	-	100	52.632	ENSPFOG00000010326	zgpat	100	51.583	Poecilia_formosa
ENSSSCG00000036595	-	100	53.686	ENSPLAG00000002135	zgpat	100	51.955	Poecilia_latipinna
ENSSSCG00000036595	-	100	52.256	ENSPMEG00000019064	zgpat	100	51.306	Poecilia_mexicana
ENSSSCG00000036595	-	100	52.363	ENSPREG00000010919	zgpat	100	50.835	Poecilia_reticulata
ENSSSCG00000036595	-	100	77.476	ENSPPYG00000011246	ZGPAT	100	77.476	Pongo_abelii
ENSSSCG00000036595	-	72	71.429	ENSPCAG00000001883	-	99	71.703	Procavia_capensis
ENSSSCG00000036595	-	100	82.342	ENSPCOG00000012369	ZGPAT	100	82.046	Propithecus_coquereli
ENSSSCG00000036595	-	100	75.728	ENSPVAG00000013489	-	100	74.951	Pteropus_vampyrus
ENSSSCG00000036595	-	100	51.692	ENSPNYG00000013216	zgpat	100	51.504	Pundamilia_nyererei
ENSSSCG00000036595	-	100	47.358	ENSPNAG00000012769	zgpat	100	47.269	Pygocentrus_nattereri
ENSSSCG00000036595	-	100	76.608	ENSRNOG00000014235	Zgpat	100	76.023	Rattus_norvegicus
ENSSSCG00000036595	-	100	78.168	ENSRBIG00000034134	ZGPAT	100	78.168	Rhinopithecus_bieti
ENSSSCG00000036595	-	100	78.016	ENSRROG00000039084	ZGPAT	100	78.210	Rhinopithecus_roxellana
ENSSSCG00000036595	-	100	79.142	ENSSBOG00000028752	ZGPAT	100	79.337	Saimiri_boliviensis_boliviensis
ENSSSCG00000036595	-	100	67.490	ENSSHAG00000017828	-	100	66.541	Sarcophilus_harrisii
ENSSSCG00000036595	-	100	50.916	ENSSFOG00015000739	zgpat	100	50.738	Scleropages_formosus
ENSSSCG00000036595	-	100	48.162	ENSSMAG00000006646	zgpat	100	49.067	Scophthalmus_maximus
ENSSSCG00000036595	-	100	51.487	ENSSDUG00000014684	zgpat	100	50.372	Seriola_dumerili
ENSSSCG00000036595	-	100	51.111	ENSSLDG00000019446	zgpat	100	49.814	Seriola_lalandi_dorsalis
ENSSSCG00000036595	-	100	60.394	ENSSPUG00000018516	-	100	59.609	Sphenodon_punctatus
ENSSSCG00000036595	-	100	51.948	ENSSPAG00000022473	zgpat	100	52.434	Stegastes_partitus
ENSSSCG00000036595	-	100	66.858	ENSTGUG00000007115	-	100	63.501	Taeniopygia_guttata
ENSSSCG00000036595	-	100	51.376	ENSTRUG00000010488	zgpat	100	50.467	Takifugu_rubripes
ENSSSCG00000036595	-	100	51.487	ENSTNIG00000004165	zgpat	100	51.119	Tetraodon_nigroviridis
ENSSSCG00000036595	-	73	88.493	ENSTTRG00000012223	-	71	88.493	Tursiops_truncatus
ENSSSCG00000036595	-	100	85.770	ENSUAMG00000009298	-	100	85.185	Ursus_americanus
ENSSSCG00000036595	-	100	85.575	ENSUMAG00000022033	-	100	84.016	Ursus_maritimus
ENSSSCG00000036595	-	100	81.092	ENSVVUG00000015014	-	100	79.337	Vulpes_vulpes
ENSSSCG00000036595	-	100	52.930	ENSXMAG00000004759	zgpat	100	51.789	Xiphophorus_maculatus