EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000036608 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 183587 bases
Position: chr2:66718077-66901663
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000057515	zf-C2H2	PF00096.26	1.3e-41	1	9
ENSSSCP00000057515	zf-C2H2	PF00096.26	1.3e-41	2	9
ENSSSCP00000057515	zf-C2H2	PF00096.26	1.3e-41	3	9
ENSSSCP00000057515	zf-C2H2	PF00096.26	1.3e-41	4	9
ENSSSCP00000057515	zf-C2H2	PF00096.26	1.3e-41	5	9
ENSSSCP00000057515	zf-C2H2	PF00096.26	1.3e-41	6	9
ENSSSCP00000057515	zf-C2H2	PF00096.26	1.3e-41	7	9
ENSSSCP00000057515	zf-C2H2	PF00096.26	1.3e-41	8	9
ENSSSCP00000057515	zf-C2H2	PF00096.26	1.3e-41	9	9
ENSSSCP00000058751	zf-C2H2	PF00096.26	7e-41	1	9
ENSSSCP00000058751	zf-C2H2	PF00096.26	7e-41	2	9
ENSSSCP00000058751	zf-C2H2	PF00096.26	7e-41	3	9
ENSSSCP00000058751	zf-C2H2	PF00096.26	7e-41	4	9
ENSSSCP00000058751	zf-C2H2	PF00096.26	7e-41	5	9
ENSSSCP00000058751	zf-C2H2	PF00096.26	7e-41	6	9
ENSSSCP00000058751	zf-C2H2	PF00096.26	7e-41	7	9
ENSSSCP00000058751	zf-C2H2	PF00096.26	7e-41	8	9
ENSSSCP00000058751	zf-C2H2	PF00096.26	7e-41	9	9
ENSSSCP00000014586	zf-C2H2	PF00096.26	1.3e-40	1	9
ENSSSCP00000014586	zf-C2H2	PF00096.26	1.3e-40	2	9
ENSSSCP00000014586	zf-C2H2	PF00096.26	1.3e-40	3	9
ENSSSCP00000014586	zf-C2H2	PF00096.26	1.3e-40	4	9
ENSSSCP00000014586	zf-C2H2	PF00096.26	1.3e-40	5	9
ENSSSCP00000014586	zf-C2H2	PF00096.26	1.3e-40	6	9
ENSSSCP00000014586	zf-C2H2	PF00096.26	1.3e-40	7	9
ENSSSCP00000014586	zf-C2H2	PF00096.26	1.3e-40	8	9
ENSSSCP00000014586	zf-C2H2	PF00096.26	1.3e-40	9	9
ENSSSCP00000057515	zf-met	PF12874.7	0.00033	1	2
ENSSSCP00000057515	zf-met	PF12874.7	0.00033	2	2
ENSSSCP00000058751	zf-met	PF12874.7	0.00051	1	2
ENSSSCP00000058751	zf-met	PF12874.7	0.00051	2	2
ENSSSCP00000014586	zf-met	PF12874.7	0.0006	1	2
ENSSSCP00000014586	zf-met	PF12874.7	0.0006	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000014990	-	1680	-	ENSSSCP00000014586	422 (aa)	-	F1SEY5
ENSSSCT00000043500	-	1885	-	ENSSSCP00000058751	403 (aa)	-	A0A287BRK1
ENSSSCT00000057224	-	1640	-	ENSSSCP00000057515	356 (aa)	-	A0A287BLM1

Gene Model

Click here to download ENSSSCG00000036608's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000036608's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000036608	-	99	47.203	ENSSSCG00000022434	ZNF235	99	47.203
ENSSSCG00000036608	-	99	46.988	ENSSSCG00000040389	-	99	48.734
ENSSSCG00000036608	-	99	49.825	ENSSSCG00000003322	-	96	45.640
ENSSSCG00000036608	-	99	44.767	ENSSSCG00000032506	ZNF317	89	44.767
ENSSSCG00000036608	-	99	55.714	ENSSSCG00000022634	-	94	55.714
ENSSSCG00000036608	-	99	42.909	ENSSSCG00000022668	ZFP1	99	38.571
ENSSSCG00000036608	-	99	49.533	ENSSSCG00000003070	ZNF45	93	49.533
ENSSSCG00000036608	-	96	46.106	ENSSSCG00000003076	ZNF226	89	46.106
ENSSSCG00000036608	-	99	48.077	ENSSSCG00000038009	-	99	45.963
ENSSSCG00000036608	-	99	41.469	ENSSSCG00000027351	ZNF454	93	41.469
ENSSSCG00000036608	-	99	44.928	ENSSSCG00000031774	-	98	44.928
ENSSSCG00000036608	-	99	54.632	ENSSSCG00000029347	-	96	54.632
ENSSSCG00000036608	-	97	50.000	ENSSSCG00000008117	ZNF2	91	44.595
ENSSSCG00000036608	-	99	46.708	ENSSSCG00000027741	-	96	46.708
ENSSSCG00000036608	-	99	42.899	ENSSSCG00000012283	ZNF81	96	42.899
ENSSSCG00000036608	-	96	52.492	ENSSSCG00000035876	ZNF599	99	53.727
ENSSSCG00000036608	-	99	46.106	ENSSSCG00000003077	ZNF112	99	46.106
ENSSSCG00000036608	-	99	39.316	ENSSSCG00000022423	-	90	39.316
ENSSSCG00000036608	-	99	47.129	ENSSSCG00000039774	-	100	47.586

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000036608	-	99	50.365	ENSG00000196757	ZNF700	93	51.064	Homo_sapiens
ENSSSCG00000036608	-	99	56.461	ENSAMEG00000012006	-	99	57.995	Ailuropoda_melanoleuca
ENSSSCG00000036608	-	99	54.969	ENSBTAG00000016721	-	99	54.969	Bos_taurus
ENSSSCG00000036608	-	99	55.462	ENSBTAG00000049339	-	100	62.435	Bos_taurus
ENSSSCG00000036608	-	96	50.213	ENSCJAG00000005453	-	99	48.763	Callithrix_jacchus
ENSSSCG00000036608	-	99	56.180	ENSCAFG00000031471	-	92	57.381	Canis_familiaris
ENSSSCG00000036608	-	99	54.789	ENSCAFG00000032123	-	100	54.969	Canis_familiaris
ENSSSCG00000036608	-	99	56.180	ENSCAFG00020005083	-	96	56.180	Canis_lupus_dingo
ENSSSCG00000036608	-	97	49.429	ENSCAFG00020005065	-	97	50.311	Canis_lupus_dingo
ENSSSCG00000036608	-	99	57.016	ENSCHIG00000020779	-	100	57.957	Capra_hircus
ENSSSCG00000036608	-	99	54.260	ENSCHIG00000008992	-	95	55.263	Capra_hircus
ENSSSCG00000036608	-	91	51.004	ENSCCAG00000024419	-	97	50.196	Cebus_capucinus
ENSSSCG00000036608	-	99	55.674	ENSCCAG00000027336	ZNF791	100	55.674	Cebus_capucinus
ENSSSCG00000036608	-	99	50.365	ENSCATG00000025335	ZNF700	96	50.760	Cercocebus_atys
ENSSSCG00000036608	-	99	56.383	ENSCATG00000041735	ZNF791	100	56.383	Cercocebus_atys
ENSSSCG00000036608	-	99	50.365	ENSCSAG00000006686	ZNF700	97	50.000	Chlorocebus_sabaeus
ENSSSCG00000036608	-	99	56.383	ENSCSAG00000006632	ZNF791	99	56.383	Chlorocebus_sabaeus
ENSSSCG00000036608	-	99	46.991	ENSCGRG00001001639	Zfp882	99	46.991	Cricetulus_griseus_chok1gshd
ENSSSCG00000036608	-	99	53.378	ENSCGRG00000013919	Zfp709	99	49.419	Cricetulus_griseus_crigri
ENSSSCG00000036608	-	96	56.299	ENSEASG00005011546	-	100	56.652	Equus_asinus_asinus
ENSSSCG00000036608	-	99	54.206	ENSEASG00005004284	-	98	57.538	Equus_asinus_asinus
ENSSSCG00000036608	-	99	50.173	ENSEASG00005022060	-	93	50.633	Equus_asinus_asinus
ENSSSCG00000036608	-	99	53.061	ENSEASG00005004288	-	99	55.068	Equus_asinus_asinus
ENSSSCG00000036608	-	96	54.122	ENSEASG00005004225	-	100	51.613	Equus_asinus_asinus
ENSSSCG00000036608	-	99	52.838	ENSEASG00005004229	-	99	55.263	Equus_asinus_asinus
ENSSSCG00000036608	-	99	56.013	ENSEASG00005014394	-	92	56.013	Equus_asinus_asinus
ENSSSCG00000036608	-	99	56.757	ENSEASG00005004242	-	85	53.086	Equus_asinus_asinus
ENSSSCG00000036608	-	99	54.480	ENSEASG00005004237	-	81	49.704	Equus_asinus_asinus
ENSSSCG00000036608	-	99	55.352	ENSECAG00000018881	-	99	56.497	Equus_caballus
ENSSSCG00000036608	-	99	49.827	ENSECAG00000032997	-	98	50.473	Equus_caballus
ENSSSCG00000036608	-	99	56.657	ENSECAG00000005497	-	99	56.657	Equus_caballus
ENSSSCG00000036608	-	99	54.861	ENSECAG00000034536	-	90	54.378	Equus_caballus
ENSSSCG00000036608	-	99	51.268	ENSECAG00000031831	-	99	50.311	Equus_caballus
ENSSSCG00000036608	-	99	52.394	ENSECAG00000000636	-	97	52.029	Equus_caballus
ENSSSCG00000036608	-	99	53.061	ENSECAG00000009346	-	99	55.068	Equus_caballus
ENSSSCG00000036608	-	99	53.936	ENSECAG00000024804	-	99	55.901	Equus_caballus
ENSSSCG00000036608	-	99	61.864	ENSECAG00000018175	-	100	63.559	Equus_caballus
ENSSSCG00000036608	-	100	50.526	ENSECAG00000036480	-	97	51.074	Equus_caballus
ENSSSCG00000036608	-	96	46.939	ENSEEUG00000008954	-	83	46.939	Erinaceus_europaeus
ENSSSCG00000036608	-	96	50.000	ENSEEUG00000013556	-	99	46.104	Erinaceus_europaeus
ENSSSCG00000036608	-	99	47.953	ENSEEUG00000009480	-	99	49.386	Erinaceus_europaeus
ENSSSCG00000036608	-	99	56.027	ENSFCAG00000039667	-	98	58.333	Felis_catus
ENSSSCG00000036608	-	99	50.365	ENSGGOG00000038420	ZNF700	91	51.368	Gorilla_gorilla
ENSSSCG00000036608	-	99	56.013	ENSGGOG00000011661	ZNF878	100	55.836	Gorilla_gorilla
ENSSSCG00000036608	-	99	55.439	ENSJJAG00000012972	Zfp709	99	55.439	Jaculus_jaculus
ENSSSCG00000036608	-	99	45.758	ENSJJAG00000014350	Zfp961	95	44.391	Jaculus_jaculus
ENSSSCG00000036608	-	99	56.383	ENSMFAG00000036181	ZNF791	100	56.383	Macaca_fascicularis
ENSSSCG00000036608	-	99	51.095	ENSMFAG00000034497	ZNF700	96	49.390	Macaca_fascicularis
ENSSSCG00000036608	-	99	51.095	ENSMMUG00000012587	ZNF700	96	49.390	Macaca_mulatta
ENSSSCG00000036608	-	99	56.383	ENSMMUG00000016862	ZNF791	100	56.383	Macaca_mulatta
ENSSSCG00000036608	-	99	51.829	ENSMNEG00000030711	ZNF700	100	50.143	Macaca_nemestrina
ENSSSCG00000036608	-	99	56.383	ENSMNEG00000045545	ZNF791	99	56.383	Macaca_nemestrina
ENSSSCG00000036608	-	99	56.383	ENSMLEG00000034449	ZNF791	100	56.383	Mandrillus_leucophaeus
ENSSSCG00000036608	-	99	47.278	ENSMAUG00000010647	Zfp882	99	47.278	Mesocricetus_auratus
ENSSSCG00000036608	-	90	50.388	ENSMAUG00000007713	Zfp868	98	41.727	Mesocricetus_auratus
ENSSSCG00000036608	-	99	49.432	ENSMICG00000042598	-	94	49.289	Microcebus_murinus
ENSSSCG00000036608	-	99	52.522	ENSMICG00000033630	-	99	52.353	Microcebus_murinus
ENSSSCG00000036608	-	99	47.126	ENSMICG00000044274	-	99	48.547	Microcebus_murinus
ENSSSCG00000036608	-	99	48.571	ENSMICG00000027210	-	96	48.571	Microcebus_murinus
ENSSSCG00000036608	-	99	45.928	ENSMOCG00000020165	Zfp101	99	46.273	Microtus_ochrogaster
ENSSSCG00000036608	-	99	43.648	ENSMOCG00000014774	Zfp961	96	41.725	Microtus_ochrogaster
ENSSSCG00000036608	-	99	46.991	MGP_CAROLIEiJ_G0031203	Zfp882	99	46.991	Mus_caroli
ENSSSCG00000036608	-	99	50.151	MGP_CAROLIEiJ_G0016437	Zfp867	96	52.475	Mus_caroli
ENSSSCG00000036608	-	99	46.991	ENSMUSG00000089857	Zfp882	99	46.991	Mus_musculus
ENSSSCG00000036608	-	96	52.174	ENSMUSG00000054519	Zfp867	95	49.292	Mus_musculus
ENSSSCG00000036608	-	99	51.648	ENSMUSG00000056019	Zfp709	99	52.025	Mus_musculus
ENSSSCG00000036608	-	96	52.174	MGP_PahariEiJ_G0017567	Zfp867	95	49.292	Mus_pahari
ENSSSCG00000036608	-	99	47.564	MGP_PahariEiJ_G0021668	Zfp882	99	47.564	Mus_pahari
ENSSSCG00000036608	-	96	52.174	MGP_SPRETEiJ_G0017272	Zfp867	95	49.292	Mus_spretus
ENSSSCG00000036608	-	99	56.338	ENSMPUG00000004877	-	96	57.720	Mustela_putorius_furo
ENSSSCG00000036608	-	99	54.789	ENSMPUG00000004901	-	100	55.102	Mustela_putorius_furo
ENSSSCG00000036608	-	99	57.238	ENSMLUG00000003693	-	99	57.245	Myotis_lucifugus
ENSSSCG00000036608	-	99	51.672	ENSNLEG00000012661	ZNF700	96	51.524	Nomascus_leucogenys
ENSSSCG00000036608	-	99	51.713	ENSOCUG00000029755	-	99	51.852	Oryctolagus_cuniculus
ENSSSCG00000036608	-	99	52.619	ENSOGAG00000002111	-	99	52.619	Otolemur_garnettii
ENSSSCG00000036608	-	99	58.865	ENSOARG00000012765	-	99	64.165	Ovis_aries
ENSSSCG00000036608	-	99	54.120	ENSOARG00000012703	-	95	55.344	Ovis_aries
ENSSSCG00000036608	-	99	56.027	ENSPPRG00000011201	-	88	58.333	Panthera_pardus
ENSSSCG00000036608	-	97	48.571	ENSPTIG00000009517	-	97	48.910	Panthera_tigris_altaica
ENSSSCG00000036608	-	99	49.157	ENSPTIG00000009499	-	100	49.157	Panthera_tigris_altaica
ENSSSCG00000036608	-	99	56.027	ENSPTIG00000012277	-	99	58.095	Panthera_tigris_altaica
ENSSSCG00000036608	-	99	50.153	ENSPTRG00000010515	ZNF700	97	49.284	Pan_troglodytes
ENSSSCG00000036608	-	99	50.730	ENSPANG00000004914	ZNF700	96	50.760	Papio_anubis
ENSSSCG00000036608	-	99	50.000	ENSPEMG00000022834	Zfp709	99	50.000	Peromyscus_maniculatus_bairdii
ENSSSCG00000036608	-	90	45.455	ENSPMAG00000006708	-	96	45.455	Petromyzon_marinus
ENSSSCG00000036608	-	99	61.137	ENSPPYG00000029413	-	100	61.137	Pongo_abelii
ENSSSCG00000036608	-	99	54.255	ENSPPYG00000009596	ZNF791	100	57.453	Pongo_abelii
ENSSSCG00000036608	-	99	50.847	ENSPPYG00000009590	ZNF700	97	49.541	Pongo_abelii
ENSSSCG00000036608	-	98	51.242	ENSPCAG00000007476	-	99	50.311	Procavia_capensis
ENSSSCG00000036608	-	99	55.000	ENSPCOG00000015720	ZNF791	99	55.107	Propithecus_coquereli
ENSSSCG00000036608	-	99	51.316	ENSPCOG00000025734	-	100	42.342	Propithecus_coquereli
ENSSSCG00000036608	-	98	49.550	ENSPCOG00000014758	-	99	54.514	Propithecus_coquereli
ENSSSCG00000036608	-	99	52.941	ENSPCOG00000024437	-	99	52.941	Propithecus_coquereli
ENSSSCG00000036608	-	99	56.635	ENSPVAG00000015563	-	100	56.635	Pteropus_vampyrus
ENSSSCG00000036608	-	99	67.213	ENSPVAG00000002257	-	86	67.213	Pteropus_vampyrus
ENSSSCG00000036608	-	99	50.473	ENSPVAG00000001626	-	99	50.893	Pteropus_vampyrus
ENSSSCG00000036608	-	99	46.705	ENSRNOG00000016417	Zfp136	99	46.705	Rattus_norvegicus
ENSSSCG00000036608	-	99	54.086	ENSRNOG00000022431	Zfp867	97	54.086	Rattus_norvegicus
ENSSSCG00000036608	-	99	54.747	ENSRBIG00000041827	ZNF878	99	54.747	Rhinopithecus_bieti
ENSSSCG00000036608	-	99	53.472	ENSRBIG00000043636	ZNF700	100	53.472	Rhinopithecus_bieti
ENSSSCG00000036608	-	99	51.220	ENSRROG00000030540	ZNF700	99	49.858	Rhinopithecus_roxellana
ENSSSCG00000036608	-	99	56.383	ENSRROG00000031644	ZNF791	100	56.383	Rhinopithecus_roxellana
ENSSSCG00000036608	-	99	56.028	ENSSBOG00000024486	ZNF791	100	56.211	Saimiri_boliviensis_boliviensis
ENSSSCG00000036608	-	95	52.186	ENSTTRG00000003482	-	94	55.357	Tursiops_truncatus
ENSSSCG00000036608	-	99	59.569	ENSTTRG00000000768	-	99	59.569	Tursiops_truncatus
ENSSSCG00000036608	-	99	53.791	ENSUAMG00000019652	-	89	55.801	Ursus_americanus
ENSSSCG00000036608	-	99	54.406	ENSUAMG00000017817	-	100	55.908	Ursus_americanus
ENSSSCG00000036608	-	99	56.461	ENSUMAG00000007577	-	96	56.461	Ursus_maritimus
ENSSSCG00000036608	-	99	54.406	ENSUMAG00000019496	-	100	55.908	Ursus_maritimus
ENSSSCG00000036608	-	99	53.587	ENSVPAG00000009652	-	99	56.563	Vicugna_pacos
ENSSSCG00000036608	-	99	56.180	ENSVVUG00000023819	-	96	56.180	Vulpes_vulpes
ENSSSCG00000036608	-	97	49.429	ENSVVUG00000023811	-	97	50.311	Vulpes_vulpes