EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000036852 (Gene tree)
Gene ID: 110255969
Gene Symbol: TSEN54
Alias: SEN54|SEN54L
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 8481 bases
Position: chr12:5846370-5854850
Accession: 110255969
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000038043	tRNA_int_end_N2	PF12928.7	1.6e-18	1	1
ENSSSCP00000038416	tRNA_int_end_N2	PF12928.7	9.8e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000062319	TSEN54-201	2766	XM_021066647	ENSSSCP00000038043	529 (aa)	XP_020922306	A0A287A2T3
ENSSSCT00000038275	TSEN54-202	2601	XM_021066651	ENSSSCP00000038416	474 (aa)	XP_020922310	A0A287A3T8

Gene Model

Click here to download ENSSSCG00000036852's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000036852's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000036852	TSEN54	100	84.934	ENSG00000182173	TSEN54	100	94.444	Homo_sapiens
ENSSSCG00000036852	TSEN54	97	45.833	ENSAPOG00000009659	tsen54	77	67.059	Acanthochromis_polyacanthus
ENSSSCG00000036852	TSEN54	99	87.547	ENSAMEG00000009414	TSEN54	99	87.547	Ailuropoda_melanoleuca
ENSSSCG00000036852	TSEN54	97	46.199	ENSAOCG00000000152	tsen54	95	46.214	Amphiprion_ocellaris
ENSSSCG00000036852	TSEN54	97	45.614	ENSAPEG00000018931	tsen54	94	45.631	Amphiprion_percula
ENSSSCG00000036852	TSEN54	97	44.038	ENSATEG00000019860	tsen54	97	43.021	Anabas_testudineus
ENSSSCG00000036852	TSEN54	96	53.913	ENSAPLG00000009419	TSEN54	100	53.913	Anas_platyrhynchos
ENSSSCG00000036852	TSEN54	97	52.591	ENSACAG00000006714	TSEN54	98	52.490	Anolis_carolinensis
ENSSSCG00000036852	TSEN54	99	86.069	ENSANAG00000024061	TSEN54	99	85.849	Aotus_nancymaae
ENSSSCG00000036852	TSEN54	97	45.472	ENSACLG00000019800	tsen54	96	45.472	Astatotilapia_calliptera
ENSSSCG00000036852	TSEN54	96	47.082	ENSAMXG00000006546	tsen54	96	46.154	Astyanax_mexicanus
ENSSSCG00000036852	TSEN54	100	88.512	ENSBTAG00000000824	TSEN54	100	88.512	Bos_taurus
ENSSSCG00000036852	TSEN54	99	85.496	ENSCJAG00000014278	TSEN54	99	85.283	Callithrix_jacchus
ENSSSCG00000036852	TSEN54	100	89.454	ENSCAFG00000004798	TSEN54	100	89.454	Canis_familiaris
ENSSSCG00000036852	TSEN54	100	89.454	ENSCAFG00020000312	TSEN54	100	89.454	Canis_lupus_dingo
ENSSSCG00000036852	TSEN54	100	85.687	ENSCHIG00000019908	TSEN54	100	85.122	Capra_hircus
ENSSSCG00000036852	TSEN54	96	83.478	ENSTSYG00000037439	TSEN54	100	83.478	Carlito_syrichta
ENSSSCG00000036852	TSEN54	99	85.115	ENSCCAG00000036624	TSEN54	99	84.906	Cebus_capucinus
ENSSSCG00000036852	TSEN54	97	85.880	ENSCATG00000042877	TSEN54	99	85.472	Cercocebus_atys
ENSSSCG00000036852	TSEN54	97	82.979	ENSCLAG00000002924	TSEN54	99	82.264	Chinchilla_lanigera
ENSSSCG00000036852	TSEN54	100	85.122	ENSCSAG00000004809	TSEN54	100	85.122	Chlorocebus_sabaeus
ENSSSCG00000036852	TSEN54	99	56.203	ENSCPBG00000028071	TSEN54	99	56.015	Chrysemys_picta_bellii
ENSSSCG00000036852	TSEN54	100	84.181	ENSCANG00000028053	TSEN54	100	84.181	Colobus_angolensis_palliatus
ENSSSCG00000036852	TSEN54	100	79.661	ENSCGRG00001020029	Tsen54	100	79.096	Cricetulus_griseus_chok1gshd
ENSSSCG00000036852	TSEN54	94	78.571	ENSCGRG00000016289	Tsen54	100	77.902	Cricetulus_griseus_crigri
ENSSSCG00000036852	TSEN54	90	39.070	ENSCSEG00000020586	tsen54	99	38.215	Cynoglossus_semilaevis
ENSSSCG00000036852	TSEN54	90	44.601	ENSDARG00000036844	tsen54	99	44.601	Danio_rerio
ENSSSCG00000036852	TSEN54	100	85.876	ENSDNOG00000018452	TSEN54	100	85.876	Dasypus_novemcinctus
ENSSSCG00000036852	TSEN54	100	80.979	ENSDORG00000004073	Tsen54	100	81.733	Dipodomys_ordii
ENSSSCG00000036852	TSEN54	97	36.278	ENSEBUG00000005203	TSEN54	95	36.278	Eptatretus_burgeri
ENSSSCG00000036852	TSEN54	100	90.207	ENSEASG00005000579	TSEN54	100	89.266	Equus_asinus_asinus
ENSSSCG00000036852	TSEN54	100	90.019	ENSECAG00000004924	TSEN54	100	89.077	Equus_caballus
ENSSSCG00000036852	TSEN54	96	84.026	ENSEEUG00000008467	TSEN54	100	84.026	Erinaceus_europaeus
ENSSSCG00000036852	TSEN54	99	45.370	ENSELUG00000017703	tsen54	92	43.993	Esox_lucius
ENSSSCG00000036852	TSEN54	100	89.454	ENSFCAG00000023712	TSEN54	100	89.454	Felis_catus
ENSSSCG00000036852	TSEN54	96	51.965	ENSFALG00000001119	TSEN54	94	53.000	Ficedula_albicollis
ENSSSCG00000036852	TSEN54	96	84.464	ENSFDAG00000019090	TSEN54	99	83.370	Fukomys_damarensis
ENSSSCG00000036852	TSEN54	97	46.979	ENSFHEG00000005470	tsen54	96	46.680	Fundulus_heteroclitus
ENSSSCG00000036852	TSEN54	75	46.061	ENSGMOG00000013146	tsen54	80	46.061	Gadus_morhua
ENSSSCG00000036852	TSEN54	96	48.485	ENSGALG00000047163	TSEN54	97	50.299	Gallus_gallus
ENSSSCG00000036852	TSEN54	97	47.276	ENSGAFG00000005111	tsen54	96	46.718	Gambusia_affinis
ENSSSCG00000036852	TSEN54	96	44.788	ENSGACG00000014987	tsen54	99	44.595	Gasterosteus_aculeatus
ENSSSCG00000036852	TSEN54	100	55.861	ENSGAGG00000006825	TSEN54	100	55.678	Gopherus_agassizii
ENSSSCG00000036852	TSEN54	97	85.380	ENSGGOG00000009417	TSEN54	100	85.380	Gorilla_gorilla
ENSSSCG00000036852	TSEN54	87	44.043	ENSHBUG00000018296	tsen54	100	38.051	Haplochromis_burtoni
ENSSSCG00000036852	TSEN54	100	84.934	ENSHGLG00000007979	TSEN54	100	84.181	Heterocephalus_glaber_female
ENSSSCG00000036852	TSEN54	100	83.992	ENSHGLG00100005497	TSEN54	100	83.239	Heterocephalus_glaber_male
ENSSSCG00000036852	TSEN54	90	42.523	ENSHCOG00000007481	tsen54	99	41.589	Hippocampus_comes
ENSSSCG00000036852	TSEN54	99	41.527	ENSIPUG00000000590	tsen54	65	74.227	Ictalurus_punctatus
ENSSSCG00000036852	TSEN54	100	79.661	ENSSTOG00000012883	TSEN54	100	79.096	Ictidomys_tridecemlineatus
ENSSSCG00000036852	TSEN54	100	80.113	ENSJJAG00000007365	Tsen54	100	79.174	Jaculus_jaculus
ENSSSCG00000036852	TSEN54	97	46.857	ENSKMAG00000006944	tsen54	97	45.611	Kryptolebias_marmoratus
ENSSSCG00000036852	TSEN54	97	44.553	ENSLBEG00000004199	tsen54	97	44.553	Labrus_bergylta
ENSSSCG00000036852	TSEN54	97	47.180	ENSLACG00000009497	TSEN54	100	46.958	Latimeria_chalumnae
ENSSSCG00000036852	TSEN54	99	49.171	ENSLOCG00000011191	tsen54	99	48.803	Lepisosteus_oculatus
ENSSSCG00000036852	TSEN54	100	81.168	ENSLAFG00000011655	TSEN54	100	81.168	Loxodonta_africana
ENSSSCG00000036852	TSEN54	100	85.311	ENSMFAG00000000712	TSEN54	100	85.311	Macaca_fascicularis
ENSSSCG00000036852	TSEN54	100	85.122	ENSMNEG00000029199	TSEN54	100	85.122	Macaca_nemestrina
ENSSSCG00000036852	TSEN54	97	84.783	ENSMLEG00000044168	TSEN54	89	84.783	Mandrillus_leucophaeus
ENSSSCG00000036852	TSEN54	97	44.359	ENSMAMG00000019773	tsen54	97	43.774	Mastacembelus_armatus
ENSSSCG00000036852	TSEN54	97	45.472	ENSMZEG00005000884	tsen54	96	45.472	Maylandia_zebra
ENSSSCG00000036852	TSEN54	97	50.193	ENSMGAG00000009556	TSEN54	97	50.193	Meleagris_gallopavo
ENSSSCG00000036852	TSEN54	100	80.414	ENSMAUG00000016838	Tsen54	100	79.849	Mesocricetus_auratus
ENSSSCG00000036852	TSEN54	100	84.557	ENSMICG00000044012	TSEN54	100	84.557	Microcebus_murinus
ENSSSCG00000036852	TSEN54	100	80.603	ENSMOCG00000021585	Tsen54	100	80.038	Microtus_ochrogaster
ENSSSCG00000036852	TSEN54	96	43.580	ENSMMOG00000020189	tsen54	98	44.163	Mola_mola
ENSSSCG00000036852	TSEN54	98	70.755	ENSMODG00000007438	TSEN54	98	70.260	Monodelphis_domestica
ENSSSCG00000036852	TSEN54	97	43.993	ENSMALG00000020573	tsen54	97	44.074	Monopterus_albus
ENSSSCG00000036852	TSEN54	100	78.719	MGP_CAROLIEiJ_G0017417	Tsen54	100	78.154	Mus_caroli
ENSSSCG00000036852	TSEN54	100	79.284	ENSMUSG00000020781	Tsen54	100	78.719	Mus_musculus
ENSSSCG00000036852	TSEN54	100	78.154	MGP_PahariEiJ_G0018547	Tsen54	100	77.589	Mus_pahari
ENSSSCG00000036852	TSEN54	100	79.284	MGP_SPRETEiJ_G0018262	Tsen54	100	78.719	Mus_spretus
ENSSSCG00000036852	TSEN54	100	87.571	ENSMPUG00000013870	TSEN54	100	87.571	Mustela_putorius_furo
ENSSSCG00000036852	TSEN54	100	84.934	ENSMLUG00000015298	TSEN54	100	84.934	Myotis_lucifugus
ENSSSCG00000036852	TSEN54	100	81.733	ENSNGAG00000015673	Tsen54	100	81.168	Nannospalax_galili
ENSSSCG00000036852	TSEN54	96	65.795	ENSMEUG00000011908	TSEN54	100	66.314	Notamacropus_eugenii
ENSSSCG00000036852	TSEN54	100	75.376	ENSOPRG00000012513	TSEN54	100	75.376	Ochotona_princeps
ENSSSCG00000036852	TSEN54	97	45.472	ENSONIG00000009543	tsen54	96	45.279	Oreochromis_niloticus
ENSSSCG00000036852	TSEN54	99	74.164	ENSOCUG00000009875	TSEN54	99	74.164	Oryctolagus_cuniculus
ENSSSCG00000036852	TSEN54	97	45.793	ENSORLG00000000852	tsen54	97	45.205	Oryzias_latipes
ENSSSCG00000036852	TSEN54	97	45.988	ENSORLG00020018221	tsen54	97	45.988	Oryzias_latipes_hni
ENSSSCG00000036852	TSEN54	97	45.988	ENSORLG00015009413	tsen54	98	44.814	Oryzias_latipes_hsok
ENSSSCG00000036852	TSEN54	97	45.597	ENSOMEG00000014402	tsen54	94	45.331	Oryzias_melastigma
ENSSSCG00000036852	TSEN54	100	79.849	ENSOGAG00000001442	TSEN54	100	79.849	Otolemur_garnettii
ENSSSCG00000036852	TSEN54	96	86.652	ENSOARG00000010361	TSEN54	100	86.652	Ovis_aries
ENSSSCG00000036852	TSEN54	96	83.807	ENSPPAG00000043519	TSEN54	99	84.830	Pan_paniscus
ENSSSCG00000036852	TSEN54	100	89.642	ENSPPRG00000009162	TSEN54	100	89.642	Panthera_pardus
ENSSSCG00000036852	TSEN54	96	88.428	ENSPTIG00000019312	TSEN54	96	88.428	Panthera_tigris_altaica
ENSSSCG00000036852	TSEN54	100	84.934	ENSPTRG00000009646	TSEN54	100	84.934	Pan_troglodytes
ENSSSCG00000036852	TSEN54	99	85.094	ENSPANG00000020133	TSEN54	99	85.094	Papio_anubis
ENSSSCG00000036852	TSEN54	97	46.570	ENSPKIG00000023018	tsen54	100	46.591	Paramormyrops_kingsleyae
ENSSSCG00000036852	TSEN54	90	53.563	ENSPSIG00000012807	TSEN54	99	53.103	Pelodiscus_sinensis
ENSSSCG00000036852	TSEN54	96	34.707	ENSPMGG00000019578	tsen54	81	55.039	Periophthalmus_magnuspinnatus
ENSSSCG00000036852	TSEN54	100	80.603	ENSPEMG00000014857	Tsen54	100	80.038	Peromyscus_maniculatus_bairdii
ENSSSCG00000036852	TSEN54	97	48.062	ENSPFOG00000022740	tsen54	96	47.115	Poecilia_formosa
ENSSSCG00000036852	TSEN54	97	48.148	ENSPLAG00000014847	tsen54	96	47.195	Poecilia_latipinna
ENSSSCG00000036852	TSEN54	97	47.953	ENSPMEG00000022876	tsen54	96	47.002	Poecilia_mexicana
ENSSSCG00000036852	TSEN54	97	46.289	ENSPREG00000013090	tsen54	96	46.109	Poecilia_reticulata
ENSSSCG00000036852	TSEN54	96	78.775	ENSPPYG00000008629	TSEN54	100	79.752	Pongo_abelii
ENSSSCG00000036852	TSEN54	95	73.913	ENSPCAG00000002093	TSEN54	99	73.913	Procavia_capensis
ENSSSCG00000036852	TSEN54	100	88.136	ENSPCOG00000027880	TSEN54	100	88.136	Propithecus_coquereli
ENSSSCG00000036852	TSEN54	100	88.324	ENSPVAG00000008446	TSEN54	100	88.324	Pteropus_vampyrus
ENSSSCG00000036852	TSEN54	96	44.469	ENSPNYG00000010217	tsen54	99	44.685	Pundamilia_nyererei
ENSSSCG00000036852	TSEN54	97	46.628	ENSPNAG00000003770	tsen54	96	46.628	Pygocentrus_nattereri
ENSSSCG00000036852	TSEN54	100	80.038	ENSRNOG00000004598	Tsen54	100	79.473	Rattus_norvegicus
ENSSSCG00000036852	TSEN54	100	84.746	ENSRBIG00000043040	TSEN54	100	84.746	Rhinopithecus_bieti
ENSSSCG00000036852	TSEN54	100	84.746	ENSRROG00000030797	TSEN54	100	84.746	Rhinopithecus_roxellana
ENSSSCG00000036852	TSEN54	99	81.887	ENSSBOG00000013543	TSEN54	99	81.887	Saimiri_boliviensis_boliviensis
ENSSSCG00000036852	TSEN54	99	68.715	ENSSHAG00000018127	TSEN54	98	68.715	Sarcophilus_harrisii
ENSSSCG00000036852	TSEN54	90	45.139	ENSSFOG00015004093	tsen54	100	45.370	Scleropages_formosus
ENSSSCG00000036852	TSEN54	96	43.333	ENSSMAG00000012449	tsen54	97	44.423	Scophthalmus_maximus
ENSSSCG00000036852	TSEN54	97	46.422	ENSSDUG00000021506	tsen54	97	45.736	Seriola_dumerili
ENSSSCG00000036852	TSEN54	97	46.408	ENSSLDG00000016303	tsen54	97	45.543	Seriola_lalandi_dorsalis
ENSSSCG00000036852	TSEN54	79	53.774	ENSSPUG00000008988	TSEN54	100	52.360	Sphenodon_punctatus
ENSSSCG00000036852	TSEN54	64	62.162	ENSSPAG00000008047	tsen54	77	62.162	Stegastes_partitus
ENSSSCG00000036852	TSEN54	96	44.053	ENSSPAG00000008098	-	99	44.715	Stegastes_partitus
ENSSSCG00000036852	TSEN54	96	53.930	ENSTGUG00000008548	TSEN54	100	53.043	Taeniopygia_guttata
ENSSSCG00000036852	TSEN54	97	44.227	ENSTRUG00000004230	tsen54	96	43.836	Takifugu_rubripes
ENSSSCG00000036852	TSEN54	96	44.423	ENSTNIG00000011281	tsen54	97	45.631	Tetraodon_nigroviridis
ENSSSCG00000036852	TSEN54	96	92.358	ENSTTRG00000015828	TSEN54	100	92.358	Tursiops_truncatus
ENSSSCG00000036852	TSEN54	90	88.605	ENSUAMG00000010045	TSEN54	100	88.605	Ursus_americanus
ENSSSCG00000036852	TSEN54	93	88.989	ENSUMAG00000008979	TSEN54	100	88.989	Ursus_maritimus
ENSSSCG00000036852	TSEN54	97	89.610	ENSVVUG00000011411	TSEN54	97	90.196	Vulpes_vulpes
ENSSSCG00000036852	TSEN54	98	49.522	ENSXETG00000012532	tsen54	99	70.833	Xenopus_tropicalis
ENSSSCG00000036852	TSEN54	97	43.689	ENSXCOG00000018245	tsen54	99	43.385	Xiphophorus_couchianus
ENSSSCG00000036852	TSEN54	97	47.674	ENSXMAG00000018818	tsen54	96	46.718	Xiphophorus_maculatus