EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000036900 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 1483 bases
Position: chr12:3950017-3951499
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000047953	Ribosomal_L23	PF00276.20	7.6e-10	1	1
ENSSSCP00000047953	Ribosomal_L23eN	PF03939.13	3.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000065169	-	381	-	ENSSSCP00000047953	126 (aa)	-	A0A287AVQ9

Gene Model

Click here to download ENSSSCG00000036900's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000036900's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000036900	-	98	49.254	ENSSSCG00000026941	-	86	49.254
ENSSSCG00000036900	-	53	66.176	ENSSSCG00000014212	-	82	66.176
ENSSSCG00000036900	-	97	52.419	ENSSSCG00000034699	-	70	52.000
ENSSSCG00000036900	-	90	51.667	ENSSSCG00000004575	-	82	51.667
ENSSSCG00000036900	-	87	55.455	ENSSSCG00000023219	-	99	55.455
ENSSSCG00000036900	-	75	50.495	ENSSSCG00000017768	-	80	50.495
ENSSSCG00000036900	-	94	60.630	ENSSSCG00000035080	-	85	60.305

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000036900	-	97	45.600	ENSAMEG00000010911	-	82	45.600	Ailuropoda_melanoleuca
ENSSSCG00000036900	-	95	56.250	ENSCAFG00000004370	-	81	55.814	Canis_familiaris
ENSSSCG00000036900	-	79	42.056	ENSDNOG00000038577	-	74	42.056	Dasypus_novemcinctus
ENSSSCG00000036900	-	75	37.113	ENSDNOG00000039226	-	76	38.384	Dasypus_novemcinctus
ENSSSCG00000036900	-	94	46.875	ENSDNOG00000045539	-	83	47.328	Dasypus_novemcinctus
ENSSSCG00000036900	-	96	45.113	ENSDNOG00000045330	-	81	45.113	Dasypus_novemcinctus
ENSSSCG00000036900	-	98	50.382	ENSDNOG00000044604	-	83	50.382	Dasypus_novemcinctus
ENSSSCG00000036900	-	97	47.656	ENSDNOG00000045465	-	82	47.656	Dasypus_novemcinctus
ENSSSCG00000036900	-	90	44.628	ENSETEG00000016952	-	89	44.628	Echinops_telfairi
ENSSSCG00000036900	-	98	47.287	ENSETEG00000014717	-	82	47.287	Echinops_telfairi
ENSSSCG00000036900	-	74	41.237	ENSETEG00000019720	-	76	41.237	Echinops_telfairi
ENSSSCG00000036900	-	64	53.933	ENSGGOG00000039527	-	59	53.933	Gorilla_gorilla
ENSSSCG00000036900	-	97	49.242	ENSMPUG00000005378	-	82	49.242	Mustela_putorius_furo
ENSSSCG00000036900	-	97	49.231	ENSOCUG00000023511	-	82	49.231	Oryctolagus_cuniculus
ENSSSCG00000036900	-	96	46.617	ENSOARG00000014931	-	69	46.617	Ovis_aries
ENSSSCG00000036900	-	82	43.636	ENSOARG00000004640	-	72	43.636	Ovis_aries
ENSSSCG00000036900	-	97	47.200	ENSPPYG00000019003	-	85	47.200	Pongo_abelii
ENSSSCG00000036900	-	97	47.200	ENSPPYG00000018315	-	85	47.200	Pongo_abelii
ENSSSCG00000036900	-	94	55.906	ENSPPYG00000007009	-	82	56.589	Pongo_abelii
ENSSSCG00000036900	-	86	41.667	ENSSHAG00000014234	-	80	40.833	Sarcophilus_harrisii