EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000036998 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 14225 bases
Position: chr6:47643560-47657784
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000050795	RRM_5	PF13893.6	1.9e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000053148	-	6433	-	ENSSSCP00000050795	188 (aa)	-	A0A287B3U6

Gene Model

Click here to download ENSSSCG00000036998's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000036998's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000036998	-	94	59.551	ENSG00000143889	HNRNPLL	97	54.264	Homo_sapiens
ENSSSCG00000036998	-	99	74.332	ENSACIG00000000531	-	99	74.332	Amphilophus_citrinellus
ENSSSCG00000036998	-	100	45.026	ENSBTAG00000052096	-	90	45.026	Bos_taurus
ENSSSCG00000036998	-	95	100.000	ENSTSYG00000001402	HNRNPL	87	100.000	Carlito_syrichta
ENSSSCG00000036998	-	94	59.551	ENSCAPG00000013604	HNRNPLL	59	59.551	Cavia_aperea
ENSSSCG00000036998	-	57	33.333	ENSCVAG00000021593	-	66	31.731	Cyprinodon_variegatus
ENSSSCG00000036998	-	83	31.646	ENSDARG00000031907	ptbp1b	56	31.061	Danio_rerio
ENSSSCG00000036998	-	95	41.530	FBgn0003435	sm	68	41.989	Drosophila_melanogaster
ENSSSCG00000036998	-	85	64.151	ENSEBUG00000008335	-	79	64.151	Eptatretus_burgeri
ENSSSCG00000036998	-	94	63.842	ENSEBUG00000012362	-	86	63.842	Eptatretus_burgeri
ENSSSCG00000036998	-	98	97.283	ENSECAG00000012677	HNRNPL	91	97.283	Equus_caballus
ENSSSCG00000036998	-	91	77.326	ENSFHEG00000004874	-	98	77.326	Fundulus_heteroclitus
ENSSSCG00000036998	-	95	75.419	ENSGMOG00000008678	-	73	75.419	Gadus_morhua
ENSSSCG00000036998	-	95	74.860	ENSGACG00000020165	-	75	74.860	Gasterosteus_aculeatus
ENSSSCG00000036998	-	93	95.429	ENSGAGG00000008379	-	100	95.429	Gopherus_agassizii
ENSSSCG00000036998	-	93	30.114	ENSHCOG00000015622	-	70	31.013	Hippocampus_comes
ENSSSCG00000036998	-	96	71.823	ENSIPUG00000019108	hnrnpl	99	71.823	Ictalurus_punctatus
ENSSSCG00000036998	-	84	30.380	ENSMALG00000013144	ptbp3	81	30.380	Monopterus_albus
ENSSSCG00000036998	-	95	71.348	ENSNBRG00000001563	-	93	71.348	Neolamprologus_brichardi
ENSSSCG00000036998	-	95	98.324	ENSODEG00000018742	-	87	98.324	Octodon_degus
ENSSSCG00000036998	-	94	59.551	ENSOANG00000013257	-	75	59.551	Ornithorhynchus_anatinus
ENSSSCG00000036998	-	53	33.663	ENSPNYG00000005126	-	55	33.663	Pundamilia_nyererei
ENSSSCG00000036998	-	95	98.324	ENSRNOG00000020235	Hnrnpl	73	98.324	Rattus_norvegicus
ENSSSCG00000036998	-	76	30.070	ENSTRUG00000000761	ptbp2a	90	30.070	Takifugu_rubripes
ENSSSCG00000036998	-	98	97.826	ENSUMAG00000019193	-	83	97.826	Ursus_maritimus
ENSSSCG00000036998	-	93	55.682	ENSXETG00000033350	HNRNPLL	70	55.682	Xenopus_tropicalis
ENSSSCG00000036998	-	84	30.380	ENSXCOG00000007998	ptbp2b	76	30.189	Xiphophorus_couchianus