EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000037061 (Gene tree)
Gene ID: 110256501
Gene Symbol: RRP1
Alias: D21S2056E|NNP-1|Nop52|RRP1A
Full Name: ribosomal RNA processing 1
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 13402 bases
Position: chr13:206722596-206735997
Accession: 110256501
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000045889	Nop52	PF05997.12	4.1e-67	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000044042	RRP1-201	1662	XM_021071076	ENSSSCP00000045889	447 (aa)	XP_020926735	A0A287APE0

Gene Model

Click here to download ENSSSCG00000037061's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000037061's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000037061	RRP1	83	52.493	ENSSSCG00000021698	RRP1B	57	50.923

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000037061	RRP1	99	68.026	ENSG00000160214	RRP1	96	95.349	Homo_sapiens
ENSSSCG00000037061	RRP1	99	68.363	ENSAMEG00000011448	RRP1	98	68.584	Ailuropoda_melanoleuca
ENSSSCG00000037061	RRP1	63	49.466	ENSACIG00000019121	rrp1	57	49.466	Amphilophus_citrinellus
ENSSSCG00000037061	RRP1	79	49.859	ENSAOCG00000017894	-	79	49.296	Amphiprion_ocellaris
ENSSSCG00000037061	RRP1	99	65.510	ENSANAG00000037815	RRP1	99	66.013	Aotus_nancymaae
ENSSSCG00000037061	RRP1	100	75.724	ENSBTAG00000003981	RRP1	99	74.388	Bos_taurus
ENSSSCG00000037061	RRP1	93	69.091	ENSCJAG00000043205	RRP1	83	70.803	Callithrix_jacchus
ENSSSCG00000037061	RRP1	99	68.791	ENSCAFG00000010646	RRP1	82	87.179	Canis_familiaris
ENSSSCG00000037061	RRP1	99	68.791	ENSCAFG00020018979	RRP1	99	68.928	Canis_lupus_dingo
ENSSSCG00000037061	RRP1	100	76.652	ENSCHIG00000020948	RRP1	99	76.211	Capra_hircus
ENSSSCG00000037061	RRP1	99	63.696	ENSTSYG00000012831	RRP1	98	65.368	Carlito_syrichta
ENSSSCG00000037061	RRP1	67	66.667	ENSCAPG00000008576	RRP1	90	64.167	Cavia_aperea
ENSSSCG00000037061	RRP1	99	64.667	ENSCPOG00000038986	RRP1	81	71.958	Cavia_porcellus
ENSSSCG00000037061	RRP1	76	47.863	ENSCPOG00000002396	RRP1B	52	46.277	Cavia_porcellus
ENSSSCG00000037061	RRP1	99	68.884	ENSCCAG00000029828	RRP1	99	68.387	Cebus_capucinus
ENSSSCG00000037061	RRP1	75	53.097	ENSCCAG00000029384	RRP1B	51	52.802	Cebus_capucinus
ENSSSCG00000037061	RRP1	91	71.776	ENSCATG00000015632	RRP1	99	67.308	Cercocebus_atys
ENSSSCG00000037061	RRP1	94	69.655	ENSCLAG00000011639	RRP1	85	71.026	Chinchilla_lanigera
ENSSSCG00000037061	RRP1	73	78.743	ENSCSAG00000007936	RRP1	100	76.855	Chlorocebus_sabaeus
ENSSSCG00000037061	RRP1	75	42.308	ENSCHOG00000002426	-	55	41.317	Choloepus_hoffmanni
ENSSSCG00000037061	RRP1	75	33.431	ENSCING00000003304	-	73	31.965	Ciona_intestinalis
ENSSSCG00000037061	RRP1	68	73.397	ENSCANG00000042611	RRP1	78	65.517	Colobus_angolensis_palliatus
ENSSSCG00000037061	RRP1	99	64.745	ENSCGRG00001011920	Rrp1	88	68.031	Cricetulus_griseus_chok1gshd
ENSSSCG00000037061	RRP1	75	52.786	ENSCGRG00001023882	-	62	63.889	Cricetulus_griseus_chok1gshd
ENSSSCG00000037061	RRP1	99	64.745	ENSCGRG00000008915	Rrp1	88	68.031	Cricetulus_griseus_crigri
ENSSSCG00000037061	RRP1	79	48.493	ENSCSEG00000020711	-	68	48.045	Cynoglossus_semilaevis
ENSSSCG00000037061	RRP1	81	45.179	ENSCVAG00000017568	-	93	45.179	Cyprinodon_variegatus
ENSSSCG00000037061	RRP1	74	47.605	ENSDARG00000103337	rrp1	53	45.093	Danio_rerio
ENSSSCG00000037061	RRP1	99	67.603	ENSDNOG00000019880	RRP1	99	66.091	Dasypus_novemcinctus
ENSSSCG00000037061	RRP1	90	57.110	ENSDORG00000002104	Rrp1	99	59.233	Dipodomys_ordii
ENSSSCG00000037061	RRP1	72	62.848	ENSETEG00000002963	-	72	61.656	Echinops_telfairi
ENSSSCG00000037061	RRP1	98	72.422	ENSEASG00005001673	RRP1	99	72.197	Equus_asinus_asinus
ENSSSCG00000037061	RRP1	98	71.973	ENSECAG00000015703	RRP1	100	72.483	Equus_caballus
ENSSSCG00000037061	RRP1	87	44.096	ENSELUG00000015885	-	91	44.706	Esox_lucius
ENSSSCG00000037061	RRP1	99	71.269	ENSFCAG00000008434	RRP1	99	69.866	Felis_catus
ENSSSCG00000037061	RRP1	99	63.938	ENSFDAG00000013728	RRP1	82	70.321	Fukomys_damarensis
ENSSSCG00000037061	RRP1	79	44.258	ENSGMOG00000001953	-	54	43.127	Gadus_morhua
ENSSSCG00000037061	RRP1	84	52.742	ENSGALG00000035696	RRP1B	50	52.742	Gallus_gallus
ENSSSCG00000037061	RRP1	83	45.187	ENSGACG00000001438	rrp1	58	44.772	Gasterosteus_aculeatus
ENSSSCG00000037061	RRP1	81	55.679	ENSGAGG00000000375	RRP1B	50	53.543	Gopherus_agassizii
ENSSSCG00000037061	RRP1	99	68.670	ENSGGOG00000000173	RRP1	99	67.094	Gorilla_gorilla
ENSSSCG00000037061	RRP1	83	46.825	ENSHGLG00000004968	RRP1B	55	46.134	Heterocephalus_glaber_female
ENSSSCG00000037061	RRP1	94	65.566	ENSHGLG00000017085	RRP1	77	71.196	Heterocephalus_glaber_female
ENSSSCG00000037061	RRP1	74	44.011	ENSIPUG00000000673	-	68	44.258	Ictalurus_punctatus
ENSSSCG00000037061	RRP1	95	67.290	ENSSTOG00000011116	RRP1	88	71.059	Ictidomys_tridecemlineatus
ENSSSCG00000037061	RRP1	74	48.397	ENSJJAG00000021279	Rrp1b	52	45.078	Jaculus_jaculus
ENSSSCG00000037061	RRP1	99	66.592	ENSJJAG00000018886	Rrp1	98	63.920	Jaculus_jaculus
ENSSSCG00000037061	RRP1	74	47.701	ENSKMAG00000005539	rrp1	54	44.504	Kryptolebias_marmoratus
ENSSSCG00000037061	RRP1	76	46.218	ENSLBEG00000021417	RRP1	93	45.600	Labrus_bergylta
ENSSSCG00000037061	RRP1	80	51.323	ENSLACG00000017332	-	50	49.735	Latimeria_chalumnae
ENSSSCG00000037061	RRP1	76	50.442	ENSLOCG00000004064	-	50	46.978	Lepisosteus_oculatus
ENSSSCG00000037061	RRP1	90	49.289	ENSLAFG00000000766	RRP1B	82	53.333	Loxodonta_africana
ENSSSCG00000037061	RRP1	83	69.792	ENSLAFG00000022901	RRP1	86	69.271	Loxodonta_africana
ENSSSCG00000037061	RRP1	99	67.527	ENSMFAG00000003202	RRP1	83	72.405	Macaca_fascicularis
ENSSSCG00000037061	RRP1	99	67.742	ENSMMUG00000012304	RRP1	77	76.177	Macaca_mulatta
ENSSSCG00000037061	RRP1	99	67.527	ENSMNEG00000031210	RRP1	77	75.549	Macaca_nemestrina
ENSSSCG00000037061	RRP1	83	69.921	ENSMLEG00000037797	RRP1	99	64.802	Mandrillus_leucophaeus
ENSSSCG00000037061	RRP1	84	51.958	ENSMGAG00000014591	RRP1B	50	51.958	Meleagris_gallopavo
ENSSSCG00000037061	RRP1	88	58.272	ENSMAUG00000017653	Rrp1	80	58.266	Mesocricetus_auratus
ENSSSCG00000037061	RRP1	99	68.722	ENSMICG00000004700	RRP1	98	66.886	Microcebus_murinus
ENSSSCG00000037061	RRP1	99	53.799	ENSMOCG00000015687	Rrp1	89	56.808	Microtus_ochrogaster
ENSSSCG00000037061	RRP1	79	45.983	ENSMMOG00000019175	rrp1	94	45.119	Mola_mola
ENSSSCG00000037061	RRP1	77	61.739	ENSMODG00000021036	-	52	59.544	Monodelphis_domestica
ENSSSCG00000037061	RRP1	79	48.459	ENSMALG00000010310	rrp1	93	48.179	Monopterus_albus
ENSSSCG00000037061	RRP1	98	77.647	MGP_CAROLIEiJ_G0015508	Rrp1	72	81.197	Mus_caroli
ENSSSCG00000037061	RRP1	73	52.147	MGP_CAROLIEiJ_G0021376	Rrp1b	53	68.254	Mus_caroli
ENSSSCG00000037061	RRP1	73	52.888	ENSMUSG00000058392	Rrp1b	53	69.841	Mus_musculus
ENSSSCG00000037061	RRP1	98	55.689	ENSMUSG00000061032	Rrp1	72	80.769	Mus_musculus
ENSSSCG00000037061	RRP1	75	52.836	MGP_PahariEiJ_G0023695	Rrp1b	60	63.889	Mus_pahari
ENSSSCG00000037061	RRP1	99	78.431	MGP_PahariEiJ_G0030921	Rrp1	72	81.624	Mus_pahari
ENSSSCG00000037061	RRP1	73	54.908	MGP_SPRETEiJ_G0022290	Rrp1b	53	69.841	Mus_spretus
ENSSSCG00000037061	RRP1	96	77.778	MGP_SPRETEiJ_G0016321	Rrp1	72	80.769	Mus_spretus
ENSSSCG00000037061	RRP1	91	64.346	ENSMPUG00000009826	RRP1	79	88.462	Mustela_putorius_furo
ENSSSCG00000037061	RRP1	90	89.083	ENSMLUG00000017788	RRP1	83	88.889	Myotis_lucifugus
ENSSSCG00000037061	RRP1	94	48.428	ENSNGAG00000022344	Rrp1	67	65.385	Nannospalax_galili
ENSSSCG00000037061	RRP1	99	66.953	ENSNLEG00000034734	RRP1	99	66.239	Nomascus_leucogenys
ENSSSCG00000037061	RRP1	80	64.146	ENSOPRG00000001319	RRP1	99	64.426	Ochotona_princeps
ENSSSCG00000037061	RRP1	74	60.303	ENSOANG00000006472	-	78	68.722	Ornithorhynchus_anatinus
ENSSSCG00000037061	RRP1	53	78.947	ENSOCUG00000022843	-	60	81.507	Oryctolagus_cuniculus
ENSSSCG00000037061	RRP1	99	66.520	ENSOGAG00000006105	RRP1	98	67.621	Otolemur_garnettii
ENSSSCG00000037061	RRP1	73	53.049	ENSOGAG00000009872	RRP1B	57	48.800	Otolemur_garnettii
ENSSSCG00000037061	RRP1	100	71.145	ENSOARG00000011434	RRP1	99	70.705	Ovis_aries
ENSSSCG00000037061	RRP1	99	68.240	ENSPPAG00000029050	RRP1	99	66.880	Pan_paniscus
ENSSSCG00000037061	RRP1	99	71.047	ENSPPRG00000010656	RRP1	99	70.601	Panthera_pardus
ENSSSCG00000037061	RRP1	83	61.917	ENSPTIG00000019473	RRP1	85	61.905	Panthera_tigris_altaica
ENSSSCG00000037061	RRP1	99	68.026	ENSPTRG00000013962	RRP1	99	66.667	Pan_troglodytes
ENSSSCG00000037061	RRP1	91	71.021	ENSPANG00000015097	RRP1	99	67.521	Papio_anubis
ENSSSCG00000037061	RRP1	76	39.601	ENSPMGG00000007512	-	88	38.378	Periophthalmus_magnuspinnatus
ENSSSCG00000037061	RRP1	89	67.980	ENSPEMG00000018421	Rrp1	88	69.231	Peromyscus_maniculatus_bairdii
ENSSSCG00000037061	RRP1	77	53.602	ENSPCIG00000015513	RRP1B	52	50.538	Phascolarctos_cinereus
ENSSSCG00000037061	RRP1	91	54.940	ENSPCIG00000015523	-	77	61.714	Phascolarctos_cinereus
ENSSSCG00000037061	RRP1	79	49.448	ENSPLAG00000016684	-	53	48.525	Poecilia_latipinna
ENSSSCG00000037061	RRP1	91	72.554	ENSPPYG00000011474	RRP1	99	65.812	Pongo_abelii
ENSSSCG00000037061	RRP1	80	56.022	ENSPCAG00000008370	-	64	71.795	Procavia_capensis
ENSSSCG00000037061	RRP1	99	66.594	ENSPCOG00000017706	RRP1	98	66.083	Propithecus_coquereli
ENSSSCG00000037061	RRP1	82	60.714	ENSPVAG00000009925	-	81	60.714	Pteropus_vampyrus
ENSSSCG00000037061	RRP1	99	61.454	ENSRNOG00000001203	Rrp1	88	66.582	Rattus_norvegicus
ENSSSCG00000037061	RRP1	99	65.605	ENSRBIG00000032082	RRP1	99	64.957	Rhinopithecus_bieti
ENSSSCG00000037061	RRP1	91	70.546	ENSRROG00000039799	RRP1	99	65.171	Rhinopithecus_roxellana
ENSSSCG00000037061	RRP1	91	71.776	ENSSBOG00000034689	RRP1	99	69.248	Saimiri_boliviensis_boliviensis
ENSSSCG00000037061	RRP1	68	59.672	ENSSHAG00000010304	-	94	59.804	Sarcophilus_harrisii
ENSSSCG00000037061	RRP1	79	48.649	ENSSMAG00000016847	-	86	47.714	Scophthalmus_maximus
ENSSSCG00000037061	RRP1	76	50.000	ENSTRUG00000017592	rrp1	97	49.123	Takifugu_rubripes
ENSSSCG00000037061	RRP1	97	41.957	ENSTNIG00000005053	rrp1	54	48.824	Tetraodon_nigroviridis
ENSSSCG00000037061	RRP1	88	43.137	ENSTBEG00000000422	RRP1B	57	46.483	Tupaia_belangeri
ENSSSCG00000037061	RRP1	68	74.497	ENSTBEG00000001260	-	55	74.638	Tupaia_belangeri
ENSSSCG00000037061	RRP1	87	79.024	ENSTTRG00000011162	RRP1	85	79.024	Tursiops_truncatus
ENSSSCG00000037061	RRP1	73	61.747	ENSUAMG00000014189	-	98	61.934	Ursus_americanus
ENSSSCG00000037061	RRP1	89	68.395	ENSUMAG00000025507	RRP1	98	67.013	Ursus_maritimus
ENSSSCG00000037061	RRP1	65	51.505	ENSUMAG00000025510	RRP1B	57	51.505	Ursus_maritimus
ENSSSCG00000037061	RRP1	67	57.962	ENSVVUG00000024498	-	77	57.944	Vulpes_vulpes