EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000037182 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 6015 bases
Position: chr4:27777610-27783624
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000040593	EST1	PF10374.9	1.3e-06	1	1
ENSSSCP00000040593	EST1_DNA_bind	PF10373.9	1.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000047210	-	1554	-	ENSSSCP00000040593	517 (aa)	-	A0A287A9B1

Gene Model

Click here to download ENSSSCG00000037182's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000037182's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000037182	-	65	42.287	ENSSSCG00000006490	-	56	36.166

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000037182	-	63	41.885	ENSAMEG00000014458	SMG5	53	35.793	Ailuropoda_melanoleuca
ENSSSCG00000037182	-	57	35.040	ENSACAG00000015999	-	74	38.811	Anolis_carolinensis
ENSSSCG00000037182	-	85	37.905	ENSANAG00000032899	SMG5	53	36.197	Aotus_nancymaae
ENSSSCG00000037182	-	99	65.511	ENSBTAG00000021747	-	58	65.511	Bos_taurus
ENSSSCG00000037182	-	85	37.524	ENSBTAG00000009435	SMG5	53	35.805	Bos_taurus
ENSSSCG00000037182	-	85	37.905	ENSCJAG00000005684	SMG5	55	36.071	Callithrix_jacchus
ENSSSCG00000037182	-	65	42.025	ENSCHIG00000007709	SMG5	53	35.921	Capra_hircus
ENSSSCG00000037182	-	99	63.778	ENSCHIG00000006323	-	59	63.778	Capra_hircus
ENSSSCG00000037182	-	65	42.278	ENSCPOG00000015696	SMG5	53	36.036	Cavia_porcellus
ENSSSCG00000037182	-	85	37.714	ENSCANG00000029208	SMG5	50	38.037	Colobus_angolensis_palliatus
ENSSSCG00000037182	-	90	57.795	ENSCGRG00001000584	-	96	56.844	Cricetulus_griseus_chok1gshd
ENSSSCG00000037182	-	74	60.455	ENSCGRG00000009566	-	95	60.455	Cricetulus_griseus_crigri
ENSSSCG00000037182	-	88	46.850	ENSDNOG00000039862	-	55	46.063	Dasypus_novemcinctus
ENSSSCG00000037182	-	85	37.002	ENSETEG00000010336	SMG5	53	37.882	Echinops_telfairi
ENSSSCG00000037182	-	65	42.025	ENSEASG00005019122	SMG5	53	36.166	Equus_asinus_asinus
ENSSSCG00000037182	-	99	35.489	ENSECAG00000001389	SMG5	53	37.431	Equus_caballus
ENSSSCG00000037182	-	83	37.356	ENSFALG00000001166	-	64	42.969	Ficedula_albicollis
ENSSSCG00000037182	-	82	37.037	ENSFDAG00000017388	SMG5	53	35.860	Fukomys_damarensis
ENSSSCG00000037182	-	68	40.587	ENSHGLG00100015948	SMG5	53	37.195	Heterocephalus_glaber_male
ENSSSCG00000037182	-	85	37.905	ENSSTOG00000001780	SMG5	53	36.166	Ictidomys_tridecemlineatus
ENSSSCG00000037182	-	87	35.283	ENSJJAG00000022763	Smg5	54	35.325	Jaculus_jaculus
ENSSSCG00000037182	-	85	37.524	ENSLAFG00000006241	SMG5	53	35.805	Loxodonta_africana
ENSSSCG00000037182	-	96	53.014	ENSMAUG00000000043	-	99	53.014	Mesocricetus_auratus
ENSSSCG00000037182	-	85	37.262	ENSMICG00000002257	SMG5	52	37.853	Microcebus_murinus
ENSSSCG00000037182	-	97	55.595	ENSMOCG00000008423	-	97	55.595	Microtus_ochrogaster
ENSSSCG00000037182	-	62	32.410	ENSMODG00000021488	-	92	32.410	Monodelphis_domestica
ENSSSCG00000037182	-	85	37.524	ENSMODG00000016901	SMG5	58	37.288	Monodelphis_domestica
ENSSSCG00000037182	-	85	36.122	MGP_CAROLIEiJ_G0025163	Smg5	88	41.250	Mus_caroli
ENSSSCG00000037182	-	85	36.122	ENSMUSG00000001415	Smg5	88	41.250	Mus_musculus
ENSSSCG00000037182	-	85	35.795	MGP_PahariEiJ_G0026606	Smg5	88	41.250	Mus_pahari
ENSSSCG00000037182	-	85	36.122	MGP_SPRETEiJ_G0026104	Smg5	88	41.250	Mus_spretus
ENSSSCG00000037182	-	92	36.347	ENSMLUG00000008518	SMG5	53	35.921	Myotis_lucifugus
ENSSSCG00000037182	-	97	60.284	ENSNGAG00000012101	-	56	60.284	Nannospalax_galili
ENSSSCG00000037182	-	88	37.615	ENSNLEG00000012439	SMG5	54	37.615	Nomascus_leucogenys
ENSSSCG00000037182	-	65	42.532	ENSMEUG00000012834	SMG5	51	37.879	Notamacropus_eugenii
ENSSSCG00000037182	-	85	37.524	ENSODEG00000012237	SMG5	53	36.298	Octodon_degus
ENSSSCG00000037182	-	92	55.787	ENSOCUG00000023338	-	59	55.787	Oryctolagus_cuniculus
ENSSSCG00000037182	-	65	38.750	ENSOMEG00000021330	smg5	63	35.802	Oryzias_melastigma
ENSSSCG00000037182	-	65	41.772	ENSOGAG00000004966	SMG5	53	37.705	Otolemur_garnettii
ENSSSCG00000037182	-	99	64.014	ENSOARG00000011963	-	58	64.014	Ovis_aries
ENSSSCG00000037182	-	65	42.025	ENSOARG00000005778	SMG5	53	35.921	Ovis_aries
ENSSSCG00000037182	-	81	38.264	ENSPSIG00000015198	SMG5	52	37.544	Pelodiscus_sinensis
ENSSSCG00000037182	-	97	56.667	ENSPEMG00000010022	-	98	56.667	Peromyscus_maniculatus_bairdii
ENSSSCG00000037182	-	85	37.571	ENSPCIG00000018938	SMG5	52	37.336	Phascolarctos_cinereus
ENSSSCG00000037182	-	85	37.905	ENSSBOG00000033339	SMG5	53	36.071	Saimiri_boliviensis_boliviensis
ENSSSCG00000037182	-	82	38.281	ENSSHAG00000014163	SMG5	51	38.281	Sarcophilus_harrisii
ENSSSCG00000037182	-	70	37.081	ENSSARG00000012484	SMG5	53	35.510	Sorex_araneus
ENSSSCG00000037182	-	87	37.294	ENSTGUG00000003748	-	53	37.982	Taeniopygia_guttata
ENSSSCG00000037182	-	85	38.388	ENSUAMG00000013721	SMG5	53	36.430	Ursus_americanus
ENSSSCG00000037182	-	82	38.552	ENSUMAG00000018041	SMG5	54	36.245	Ursus_maritimus
ENSSSCG00000037182	-	82	32.422	ENSVPAG00000009446	SMG5	53	31.365	Vicugna_pacos