EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000037245 (Gene tree)
Gene ID: 100511704
Gene Symbol: -
Alias: HNRPDL|JKTBP|laAUF1
Full Name: heterogeneous nuclear ribonucleoprotein D like
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 10626 bases
Position: chr8:135802407-135813032
Accession: 100511704
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000036478	RRM_1	PF00076.22	2.8e-33	1	2
ENSSSCP00000036478	RRM_1	PF00076.22	2.8e-33	2	2
ENSSSCP00000050682	RRM_1	PF00076.22	4.4e-33	1	2
ENSSSCP00000050682	RRM_1	PF00076.22	4.4e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000039976	-	6644	XM_021101874	ENSSSCP00000050682	420 (aa)	XP_020957533	A0A287B2L4
ENSSSCT00000059147	-	4053	XM_021101877	ENSSSCP00000036478	363 (aa)	XP_020957536	A0A286ZYE7

Gene Model

Click here to download ENSSSCG00000037245's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000037245's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000037245	-	53	31.646	ENSSSCG00000005430	-	53	36.207
ENSSSCG00000037245	-	56	37.037	ENSSSCG00000036350	HNRNPA2B1	57	38.824
ENSSSCG00000037245	-	64	64.957	ENSSSCG00000014031	-	78	67.949
ENSSSCG00000037245	-	77	52.280	ENSSSCG00000012473	-	63	68.132
ENSSSCG00000037245	-	63	52.119	ENSSSCG00000001932	-	80	52.381
ENSSSCG00000037245	-	58	39.271	ENSSSCG00000029365	MSI1	50	49.133
ENSSSCG00000037245	-	69	64.583	ENSSSCG00000009249	HNRNPD	82	64.605
ENSSSCG00000037245	-	53	32.474	ENSSSCG00000036878	-	67	30.380
ENSSSCG00000037245	-	68	40.203	ENSSSCG00000038505	MSI2	60	49.189

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000037245	-	100	98.095	ENSG00000152795	HNRNPDL	100	100.000	Homo_sapiens
ENSSSCG00000037245	-	93	100.000	ENSAMEG00000005145	-	100	88.571	Ailuropoda_melanoleuca
ENSSSCG00000037245	-	72	77.228	ENSAMEG00000007660	-	100	75.248	Ailuropoda_melanoleuca
ENSSSCG00000037245	-	67	95.076	ENSAPLG00000011774	HNRNPDL	99	95.076	Anas_platyrhynchos
ENSSSCG00000037245	-	69	93.127	ENSACAG00000010416	HNRNPDL	92	93.127	Anolis_carolinensis
ENSSSCG00000037245	-	80	91.369	ENSANAG00000030316	-	83	95.833	Aotus_nancymaae
ENSSSCG00000037245	-	54	100.000	ENSANAG00000035255	-	99	77.733	Aotus_nancymaae
ENSSSCG00000037245	-	78	85.263	ENSANAG00000035355	-	100	87.043	Aotus_nancymaae
ENSSSCG00000037245	-	100	97.857	ENSANAG00000029054	HNRNPDL	100	97.857	Aotus_nancymaae
ENSSSCG00000037245	-	72	92.053	ENSANAG00000038001	-	100	91.391	Aotus_nancymaae
ENSSSCG00000037245	-	70	73.220	ENSAMXG00000001495	hnrnpdl	96	75.685	Astyanax_mexicanus
ENSSSCG00000037245	-	100	98.095	ENSBTAG00000014804	HNRNPDL	100	98.095	Bos_taurus
ENSSSCG00000037245	-	73	93.985	ENSCJAG00000045227	-	94	94.275	Callithrix_jacchus
ENSSSCG00000037245	-	100	98.095	ENSCJAG00000015197	-	100	98.095	Callithrix_jacchus
ENSSSCG00000037245	-	69	83.681	ENSCAFG00000000776	-	100	83.681	Canis_familiaris
ENSSSCG00000037245	-	100	98.810	ENSCAFG00000008940	HNRNPDL	100	98.810	Canis_familiaris
ENSSSCG00000037245	-	100	98.810	ENSCAFG00020010699	-	100	98.810	Canis_lupus_dingo
ENSSSCG00000037245	-	100	98.095	ENSCHIG00000010260	-	100	98.095	Capra_hircus
ENSSSCG00000037245	-	78	82.042	ENSCHIG00000026667	-	79	79.710	Capra_hircus
ENSSSCG00000037245	-	67	98.897	ENSTSYG00000031074	-	100	98.897	Carlito_syrichta
ENSSSCG00000037245	-	69	81.944	ENSTSYG00000036907	-	100	81.944	Carlito_syrichta
ENSSSCG00000037245	-	52	100.000	ENSCAPG00000015955	-	100	83.271	Cavia_aperea
ENSSSCG00000037245	-	93	100.000	ENSCPOG00000015619	-	100	90.307	Cavia_porcellus
ENSSSCG00000037245	-	100	97.857	ENSCCAG00000020777	HNRNPDL	100	97.857	Cebus_capucinus
ENSSSCG00000037245	-	56	96.098	ENSCATG00000030349	-	91	96.098	Cercocebus_atys
ENSSSCG00000037245	-	95	100.000	ENSCATG00000038573	-	93	100.000	Cercocebus_atys
ENSSSCG00000037245	-	100	96.200	ENSCLAG00000008428	HNRNPDL	100	96.200	Chinchilla_lanigera
ENSSSCG00000037245	-	72	75.083	ENSCLAG00000010786	-	100	75.083	Chinchilla_lanigera
ENSSSCG00000037245	-	100	98.333	ENSCSAG00000004461	HNRNPDL	100	98.333	Chlorocebus_sabaeus
ENSSSCG00000037245	-	67	97.059	ENSCHOG00000002938	-	100	97.059	Choloepus_hoffmanni
ENSSSCG00000037245	-	70	98.630	ENSCHOG00000000160	-	100	98.630	Choloepus_hoffmanni
ENSSSCG00000037245	-	80	95.238	ENSCHOG00000010831	-	99	95.181	Choloepus_hoffmanni
ENSSSCG00000037245	-	65	95.437	ENSCHOG00000009204	-	100	95.437	Choloepus_hoffmanni
ENSSSCG00000037245	-	80	93.452	ENSCHOG00000003275	-	99	88.253	Choloepus_hoffmanni
ENSSSCG00000037245	-	72	94.389	ENSCPBG00000008014	HNRNPDL	100	94.389	Chrysemys_picta_bellii
ENSSSCG00000037245	-	65	100.000	ENSCANG00000020228	-	100	100.000	Colobus_angolensis_palliatus
ENSSSCG00000037245	-	100	95.765	ENSCGRG00001010960	Hnrnpdl	100	95.765	Cricetulus_griseus_chok1gshd
ENSSSCG00000037245	-	67	99.632	ENSCGRG00000011361	-	96	99.632	Cricetulus_griseus_crigri
ENSSSCG00000037245	-	71	71.667	ENSDARG00000003429	hnrnpdl	99	75.415	Danio_rerio
ENSSSCG00000037245	-	74	95.146	ENSDNOG00000018280	-	100	95.146	Dasypus_novemcinctus
ENSSSCG00000037245	-	67	99.590	ENSDNOG00000033765	-	100	99.590	Dasypus_novemcinctus
ENSSSCG00000037245	-	71	94.295	ENSDNOG00000033760	-	96	94.295	Dasypus_novemcinctus
ENSSSCG00000037245	-	100	97.381	ENSDNOG00000003887	-	100	97.381	Dasypus_novemcinctus
ENSSSCG00000037245	-	65	65.468	ENSDNOG00000034016	-	96	64.898	Dasypus_novemcinctus
ENSSSCG00000037245	-	52	75.000	ENSDNOG00000046422	-	99	75.000	Dasypus_novemcinctus
ENSSSCG00000037245	-	95	100.000	ENSDORG00000000968	-	100	96.200	Dipodomys_ordii
ENSSSCG00000037245	-	72	91.030	ENSDORG00000024157	-	100	91.030	Dipodomys_ordii
ENSSSCG00000037245	-	55	65.236	ENSETEG00000010820	-	100	63.948	Echinops_telfairi
ENSSSCG00000037245	-	100	97.857	ENSEASG00005016276	-	100	97.857	Equus_asinus_asinus
ENSSSCG00000037245	-	78	47.965	ENSEASG00005012961	-	75	61.140	Equus_asinus_asinus
ENSSSCG00000037245	-	78	48.193	ENSECAG00000040564	-	78	56.067	Equus_caballus
ENSSSCG00000037245	-	100	97.857	ENSECAG00000022692	HNRNPDL	100	97.857	Equus_caballus
ENSSSCG00000037245	-	95	100.000	ENSEEUG00000004301	-	100	92.399	Erinaceus_europaeus
ENSSSCG00000037245	-	70	77.133	ENSELUG00000003241	hnrnpdl	97	77.133	Esox_lucius
ENSSSCG00000037245	-	100	98.333	ENSFCAG00000000455	HNRNPDL	100	98.333	Felis_catus
ENSSSCG00000037245	-	72	93.377	ENSFALG00000005709	HNRNPDL	100	93.377	Ficedula_albicollis
ENSSSCG00000037245	-	67	49.383	ENSFDAG00000002891	-	53	56.410	Fukomys_damarensis
ENSSSCG00000037245	-	67	100.000	ENSFDAG00000000851	-	99	100.000	Fukomys_damarensis
ENSSSCG00000037245	-	72	93.709	ENSGALG00000023199	HNRNPDL	100	93.709	Gallus_gallus
ENSSSCG00000037245	-	72	94.389	ENSGAGG00000003646	HNRNPDL	100	94.389	Gopherus_agassizii
ENSSSCG00000037245	-	100	97.619	ENSGGOG00000003714	HNRNPDL	100	97.619	Gorilla_gorilla
ENSSSCG00000037245	-	100	95.261	ENSHGLG00000015791	HNRNPDL	100	94.076	Heterocephalus_glaber_female
ENSSSCG00000037245	-	87	82.965	ENSHGLG00000014427	-	94	97.129	Heterocephalus_glaber_female
ENSSSCG00000037245	-	70	95.149	ENSHGLG00000013420	-	90	95.149	Heterocephalus_glaber_female
ENSSSCG00000037245	-	72	82.060	ENSHGLG00100016282	-	100	78.738	Heterocephalus_glaber_male
ENSSSCG00000037245	-	80	97.059	ENSHGLG00100005262	HNRNPDL	100	97.059	Heterocephalus_glaber_male
ENSSSCG00000037245	-	68	79.021	ENSHGLG00100010072	-	93	78.884	Heterocephalus_glaber_male
ENSSSCG00000037245	-	76	79.624	ENSHGLG00100019080	-	95	80.064	Heterocephalus_glaber_male
ENSSSCG00000037245	-	72	83.444	ENSHGLG00100017644	-	100	80.464	Heterocephalus_glaber_male
ENSSSCG00000037245	-	69	70.748	ENSIPUG00000024951	hnrnpdl	96	73.630	Ictalurus_punctatus
ENSSSCG00000037245	-	100	97.143	ENSSTOG00000013979	HNRNPDL	100	97.143	Ictidomys_tridecemlineatus
ENSSSCG00000037245	-	100	95.981	ENSJJAG00000021673	Hnrnpdl	100	95.981	Jaculus_jaculus
ENSSSCG00000037245	-	77	89.606	ENSJJAG00000000674	-	91	89.818	Jaculus_jaculus
ENSSSCG00000037245	-	51	100.000	ENSLACG00000003613	HNRNPDL	85	100.000	Latimeria_chalumnae
ENSSSCG00000037245	-	70	77.816	ENSLOCG00000010736	hnrnpdl	97	77.740	Lepisosteus_oculatus
ENSSSCG00000037245	-	100	97.381	ENSLAFG00000008612	HNRNPDL	100	97.381	Loxodonta_africana
ENSSSCG00000037245	-	61	54.464	ENSLAFG00000031444	-	71	59.677	Loxodonta_africana
ENSSSCG00000037245	-	100	98.095	ENSMFAG00000002275	HNRNPDL	100	98.095	Macaca_fascicularis
ENSSSCG00000037245	-	67	100.000	ENSMMUG00000015777	HNRNPDL	100	100.000	Macaca_mulatta
ENSSSCG00000037245	-	100	98.095	ENSMNEG00000045130	HNRNPDL	100	98.095	Macaca_nemestrina
ENSSSCG00000037245	-	72	95.349	ENSMLEG00000014825	-	100	95.349	Mandrillus_leucophaeus
ENSSSCG00000037245	-	72	100.000	ENSMLEG00000041600	HNRNPDL	100	100.000	Mandrillus_leucophaeus
ENSSSCG00000037245	-	67	93.015	ENSMGAG00000008033	HNRNPDL	99	99.401	Meleagris_gallopavo
ENSSSCG00000037245	-	100	94.799	ENSMAUG00000011132	Hnrnpdl	100	93.853	Mesocricetus_auratus
ENSSSCG00000037245	-	57	97.115	ENSMICG00000037040	-	95	97.115	Microcebus_murinus
ENSSSCG00000037245	-	97	100.000	ENSMICG00000001445	-	100	93.023	Microcebus_murinus
ENSSSCG00000037245	-	100	94.299	ENSMOCG00000015928	Hnrnpdl	100	94.299	Microtus_ochrogaster
ENSSSCG00000037245	-	67	94.262	ENSMODG00000006825	-	100	94.262	Monodelphis_domestica
ENSSSCG00000037245	-	95	100.000	ENSMODG00000011916	-	100	93.333	Monodelphis_domestica
ENSSSCG00000037245	-	100	96.429	ENSMUSG00000029328	Hnrnpdl	99	97.826	Mus_musculus
ENSSSCG00000037245	-	100	94.076	MGP_PahariEiJ_G0017226	Hnrnpdl	100	97.516	Mus_pahari
ENSSSCG00000037245	-	100	96.190	MGP_SPRETEiJ_G0028445	Hnrnpdl	100	97.826	Mus_spretus
ENSSSCG00000037245	-	75	95.584	ENSMPUG00000009986	-	97	95.584	Mustela_putorius_furo
ENSSSCG00000037245	-	65	74.144	ENSMPUG00000011188	-	99	70.611	Mustela_putorius_furo
ENSSSCG00000037245	-	68	76.307	ENSMPUG00000006259	-	100	76.307	Mustela_putorius_furo
ENSSSCG00000037245	-	65	100.000	ENSMPUG00000014753	-	99	100.000	Mustela_putorius_furo
ENSSSCG00000037245	-	100	96.667	ENSMLUG00000014452	-	100	96.667	Myotis_lucifugus
ENSSSCG00000037245	-	67	75.887	ENSMLUG00000025989	-	91	70.922	Myotis_lucifugus
ENSSSCG00000037245	-	69	46.488	ENSMLUG00000030192	-	63	58.470	Myotis_lucifugus
ENSSSCG00000037245	-	100	96.190	ENSNGAG00000015740	Hnrnpdl	100	95.476	Nannospalax_galili
ENSSSCG00000037245	-	100	98.571	ENSNLEG00000008636	HNRNPDL	100	98.571	Nomascus_leucogenys
ENSSSCG00000037245	-	80	78.209	ENSMEUG00000010033	HNRNPDL	98	78.222	Notamacropus_eugenii
ENSSSCG00000037245	-	67	93.878	ENSMEUG00000011454	-	93	92.952	Notamacropus_eugenii
ENSSSCG00000037245	-	67	98.897	ENSOPRG00000007178	-	100	98.897	Ochotona_princeps
ENSSSCG00000037245	-	81	93.605	ENSODEG00000020231	-	95	94.030	Octodon_degus
ENSSSCG00000037245	-	89	94.118	ENSODEG00000002106	-	93	94.879	Octodon_degus
ENSSSCG00000037245	-	90	80.106	ENSODEG00000000376	-	86	91.083	Octodon_degus
ENSSSCG00000037245	-	72	93.688	ENSODEG00000004187	-	100	93.688	Octodon_degus
ENSSSCG00000037245	-	71	95.973	ENSODEG00000003135	-	100	95.973	Octodon_degus
ENSSSCG00000037245	-	65	100.000	ENSOANG00000004651	HNRNPDL	100	100.000	Ornithorhynchus_anatinus
ENSSSCG00000037245	-	95	100.000	ENSOCUG00000013805	-	100	94.286	Oryctolagus_cuniculus
ENSSSCG00000037245	-	60	57.078	ENSOCUG00000025252	-	90	60.000	Oryctolagus_cuniculus
ENSSSCG00000037245	-	71	51.000	ENSOGAG00000024995	-	66	64.249	Otolemur_garnettii
ENSSSCG00000037245	-	54	89.340	ENSOGAG00000031703	-	81	91.257	Otolemur_garnettii
ENSSSCG00000037245	-	97	100.000	ENSOGAG00000002501	-	100	96.667	Otolemur_garnettii
ENSSSCG00000037245	-	61	95.023	ENSOARG00000011472	-	77	95.023	Ovis_aries
ENSSSCG00000037245	-	73	79.026	ENSOARG00000002402	-	89	78.077	Ovis_aries
ENSSSCG00000037245	-	67	100.000	ENSOARG00000000824	-	84	100.000	Ovis_aries
ENSSSCG00000037245	-	100	98.095	ENSPPAG00000043177	HNRNPDL	100	98.095	Pan_paniscus
ENSSSCG00000037245	-	100	98.571	ENSPPRG00000013787	HNRNPDL	100	98.571	Panthera_pardus
ENSSSCG00000037245	-	72	100.000	ENSPTIG00000018505	HNRNPDL	100	100.000	Panthera_tigris_altaica
ENSSSCG00000037245	-	100	98.095	ENSPTRG00000016217	HNRNPDL	100	98.095	Pan_troglodytes
ENSSSCG00000037245	-	100	98.095	ENSPANG00000004761	HNRNPDL	100	98.095	Papio_anubis
ENSSSCG00000037245	-	73	77.551	ENSPKIG00000025514	hnrnpdl	97	76.451	Paramormyrops_kingsleyae
ENSSSCG00000037245	-	72	100.000	ENSPSIG00000016746	HNRNPDL	93	92.971	Pelodiscus_sinensis
ENSSSCG00000037245	-	93	100.000	ENSPEMG00000016545	-	98	93.220	Peromyscus_maniculatus_bairdii
ENSSSCG00000037245	-	51	80.899	ENSPCIG00000008965	-	70	82.558	Phascolarctos_cinereus
ENSSSCG00000037245	-	100	93.333	ENSPCIG00000003089	-	100	93.095	Phascolarctos_cinereus
ENSSSCG00000037245	-	67	70.612	ENSPCIG00000009814	-	73	75.862	Phascolarctos_cinereus
ENSSSCG00000037245	-	100	98.571	ENSPPYG00000014886	HNRNPDL	100	98.571	Pongo_abelii
ENSSSCG00000037245	-	95	100.000	ENSPCAG00000011543	HNRNPDL	100	87.381	Procavia_capensis
ENSSSCG00000037245	-	100	98.571	ENSPCOG00000019831	-	100	98.571	Propithecus_coquereli
ENSSSCG00000037245	-	93	100.000	ENSPVAG00000006816	HNRNPDL	100	90.714	Pteropus_vampyrus
ENSSSCG00000037245	-	52	87.302	ENSPNAG00000016380	hnrnpdl	80	76.471	Pygocentrus_nattereri
ENSSSCG00000037245	-	100	95.714	ENSRNOG00000002270	Hnrnpdl	100	96.190	Rattus_norvegicus
ENSSSCG00000037245	-	100	98.333	ENSRBIG00000030310	HNRNPDL	100	98.333	Rhinopithecus_bieti
ENSSSCG00000037245	-	100	98.333	ENSRROG00000034174	HNRNPDL	100	98.333	Rhinopithecus_roxellana
ENSSSCG00000037245	-	72	81.728	ENSSBOG00000022627	-	100	81.728	Saimiri_boliviensis_boliviensis
ENSSSCG00000037245	-	59	77.328	ENSSBOG00000028904	-	99	76.518	Saimiri_boliviensis_boliviensis
ENSSSCG00000037245	-	72	91.362	ENSSBOG00000020566	-	100	91.362	Saimiri_boliviensis_boliviensis
ENSSSCG00000037245	-	90	94.709	ENSSHAG00000013616	-	100	94.180	Sarcophilus_harrisii
ENSSSCG00000037245	-	73	77.816	ENSSFOG00015005893	hnrnpdl	97	77.816	Scleropages_formosus
ENSSSCG00000037245	-	65	94.650	ENSSARG00000009961	-	98	94.650	Sorex_araneus
ENSSSCG00000037245	-	60	100.000	ENSSPUG00000013700	HNRNPDL	100	95.431	Sphenodon_punctatus
ENSSSCG00000037245	-	67	94.485	ENSTGUG00000002850	HNRNPDL	100	94.485	Taeniopygia_guttata
ENSSSCG00000037245	-	96	92.556	ENSTBEG00000002817	-	99	90.819	Tupaia_belangeri
ENSSSCG00000037245	-	100	95.000	ENSTTRG00000001793	-	100	95.000	Tursiops_truncatus
ENSSSCG00000037245	-	100	98.810	ENSUAMG00000011358	HNRNPDL	100	98.810	Ursus_americanus
ENSSSCG00000037245	-	80	99.110	ENSUMAG00000008681	HNRNPDL	81	99.110	Ursus_maritimus
ENSSSCG00000037245	-	65	78.676	ENSVPAG00000002422	-	100	78.676	Vicugna_pacos
ENSSSCG00000037245	-	100	98.095	ENSVVUG00000024653	HNRNPDL	100	98.095	Vulpes_vulpes
ENSSSCG00000037245	-	55	77.914	ENSVVUG00000001421	-	95	79.670	Vulpes_vulpes
ENSSSCG00000037245	-	72	89.542	ENSVVUG00000013596	-	100	88.235	Vulpes_vulpes
ENSSSCG00000037245	-	71	81.000	ENSXETG00000023026	hnrnpdl	100	80.333	Xenopus_tropicalis