EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000037347 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: R3H and coiled-coil domain-containing protein 1-like
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 8516 bases
Position: chrAEMK02000214.1:12150-20665
Accession: 110258721
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000043585	R3H	PF01424.22	3.7e-05	1	1
ENSSSCP00000034652	R3H	PF01424.22	4.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000045974	-	2704	-	ENSSSCP00000053525	399 (aa)	-	A0A287BAJ6
ENSSSCT00000062496	-	1443	XM_021081992	ENSSSCP00000034652	480 (aa)	XP_020937651	A0A286ZSP1
ENSSSCT00000057891	-	1417	-	ENSSSCP00000031554	381 (aa)	-	A0A286ZJ99
ENSSSCT00000044736	-	1389	-	ENSSSCP00000043585	462 (aa)	-	A0A287AI78

Gene Model

Click here to download ENSSSCG00000037347's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000037347's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000037347	-	95	91.304	ENSSSCG00000039915	-	97	91.304

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000037347	-	91	72.584	ENSG00000104679	R3HCC1	100	100.000	Homo_sapiens
ENSSSCG00000037347	-	63	34.831	ENSAPOG00000003616	r3hcc1	61	42.105	Acanthochromis_polyacanthus
ENSSSCG00000037347	-	89	74.424	ENSAMEG00000002963	R3HCC1	92	73.138	Ailuropoda_melanoleuca
ENSSSCG00000037347	-	51	42.222	ENSAOCG00000003945	r3hcc1	68	41.447	Amphiprion_ocellaris
ENSSSCG00000037347	-	84	30.456	ENSAPEG00000003613	r3hcc1	64	42.222	Amphiprion_percula
ENSSSCG00000037347	-	88	44.270	ENSACAG00000016627	R3HCC1	96	44.027	Anolis_carolinensis
ENSSSCG00000037347	-	92	73.154	ENSANAG00000036169	R3HCC1	96	73.154	Aotus_nancymaae
ENSSSCG00000037347	-	89	78.291	ENSBTAG00000025830	R3HCC1	95	76.888	Bos_taurus
ENSSSCG00000037347	-	91	71.910	ENSCJAG00000020118	R3HCC1	100	64.138	Callithrix_jacchus
ENSSSCG00000037347	-	92	69.420	ENSCAFG00000009210	R3HCC1	97	70.312	Canis_familiaris
ENSSSCG00000037347	-	77	73.067	ENSCAFG00020012870	R3HCC1	87	72.800	Canis_lupus_dingo
ENSSSCG00000037347	-	91	69.197	ENSCHIG00000009107	R3HCC1	97	70.562	Capra_hircus
ENSSSCG00000037347	-	92	74.944	ENSTSYG00000000511	R3HCC1	79	74.944	Carlito_syrichta
ENSSSCG00000037347	-	82	50.808	ENSCAPG00000015813	R3HCC1	98	50.345	Cavia_aperea
ENSSSCG00000037347	-	91	59.072	ENSCPOG00000009696	R3HCC1	99	58.577	Cavia_porcellus
ENSSSCG00000037347	-	91	72.135	ENSCCAG00000037811	R3HCC1	95	71.366	Cebus_capucinus
ENSSSCG00000037347	-	93	72.026	ENSCATG00000032971	R3HCC1	100	65.517	Cercocebus_atys
ENSSSCG00000037347	-	91	66.667	ENSCLAG00000015556	R3HCC1	88	65.727	Chinchilla_lanigera
ENSSSCG00000037347	-	92	72.646	ENSCSAG00000016250	R3HCC1	93	72.870	Chlorocebus_sabaeus
ENSSSCG00000037347	-	89	69.816	ENSCHOG00000000396	R3HCC1	94	69.816	Choloepus_hoffmanni
ENSSSCG00000037347	-	97	69.427	ENSCANG00000029441	R3HCC1	98	69.427	Colobus_angolensis_palliatus
ENSSSCG00000037347	-	91	58.368	ENSCGRG00001014977	R3hcc1	100	57.700	Cricetulus_griseus_chok1gshd
ENSSSCG00000037347	-	91	58.368	ENSCGRG00000004454	R3hcc1	100	57.700	Cricetulus_griseus_crigri
ENSSSCG00000037347	-	87	30.162	ENSCSEG00000005748	r3hcc1	74	45.070	Cynoglossus_semilaevis
ENSSSCG00000037347	-	87	30.425	ENSDARG00000099593	r3hcc1	98	30.189	Danio_rerio
ENSSSCG00000037347	-	92	72.707	ENSDNOG00000007168	R3HCC1	93	72.707	Dasypus_novemcinctus
ENSSSCG00000037347	-	90	58.884	ENSDORG00000026365	R3hcc1	99	58.058	Dipodomys_ordii
ENSSSCG00000037347	-	90	62.045	ENSETEG00000001147	R3HCC1	96	62.273	Echinops_telfairi
ENSSSCG00000037347	-	89	76.443	ENSEASG00005018782	R3HCC1	79	76.443	Equus_asinus_asinus
ENSSSCG00000037347	-	89	76.212	ENSECAG00000025013	R3HCC1	96	76.212	Equus_caballus
ENSSSCG00000037347	-	89	70.575	ENSEEUG00000011918	R3HCC1	96	70.345	Erinaceus_europaeus
ENSSSCG00000037347	-	85	32.952	ENSELUG00000023650	r3hcc1	98	33.981	Esox_lucius
ENSSSCG00000037347	-	91	73.198	ENSFCAG00000012395	R3HCC1	96	75.229	Felis_catus
ENSSSCG00000037347	-	92	32.673	ENSFALG00000001646	R3HCC1	83	34.646	Ficedula_albicollis
ENSSSCG00000037347	-	93	59.789	ENSFDAG00000001572	R3HCC1	99	59.789	Fukomys_damarensis
ENSSSCG00000037347	-	88	32.517	ENSGAFG00000008747	-	91	32.739	Gambusia_affinis
ENSSSCG00000037347	-	94	30.544	ENSGACG00000008447	r3hcc1	100	31.096	Gasterosteus_aculeatus
ENSSSCG00000037347	-	64	53.797	ENSGAGG00000018009	R3HCC1	50	51.462	Gopherus_agassizii
ENSSSCG00000037347	-	94	71.868	ENSGGOG00000013817	R3HCC1	100	72.045	Gorilla_gorilla
ENSSSCG00000037347	-	95	60.851	ENSHGLG00000010517	R3HCC1	93	62.693	Heterocephalus_glaber_female
ENSSSCG00000037347	-	95	60.851	ENSHGLG00100006388	R3HCC1	93	62.693	Heterocephalus_glaber_male
ENSSSCG00000037347	-	87	30.260	ENSHCOG00000011745	r3hcc1	93	31.002	Hippocampus_comes
ENSSSCG00000037347	-	79	31.926	ENSIPUG00000024504	r3hcc1	87	32.160	Ictalurus_punctatus
ENSSSCG00000037347	-	91	61.298	ENSSTOG00000027130	R3HCC1	97	61.197	Ictidomys_tridecemlineatus
ENSSSCG00000037347	-	90	60.645	ENSJJAG00000013075	R3hcc1	100	61.290	Jaculus_jaculus
ENSSSCG00000037347	-	51	41.096	ENSKMAG00000000286	r3hcc1	68	40.940	Kryptolebias_marmoratus
ENSSSCG00000037347	-	93	35.282	ENSLACG00000011894	R3HCC1	99	35.331	Latimeria_chalumnae
ENSSSCG00000037347	-	88	31.121	ENSLOCG00000015442	r3hcc1	99	30.843	Lepisosteus_oculatus
ENSSSCG00000037347	-	92	65.696	ENSLAFG00000016137	R3HCC1	97	63.730	Loxodonta_africana
ENSSSCG00000037347	-	93	71.806	ENSMFAG00000032894	R3HCC1	100	65.287	Macaca_fascicularis
ENSSSCG00000037347	-	93	71.806	ENSMMUG00000016655	R3HCC1	100	65.287	Macaca_mulatta
ENSSSCG00000037347	-	93	71.586	ENSMNEG00000043283	R3HCC1	100	65.057	Macaca_nemestrina
ENSSSCG00000037347	-	93	72.026	ENSMLEG00000030147	R3HCC1	95	72.247	Mandrillus_leucophaeus
ENSSSCG00000037347	-	50	44.444	ENSMAMG00000018146	r3hcc1	99	30.425	Mastacembelus_armatus
ENSSSCG00000037347	-	91	41.704	ENSMGAG00000001356	R3HCC1	93	41.704	Meleagris_gallopavo
ENSSSCG00000037347	-	90	58.526	ENSMAUG00000016096	R3hcc1	100	59.244	Mesocricetus_auratus
ENSSSCG00000037347	-	89	71.330	ENSMICG00000011146	R3HCC1	93	71.494	Microcebus_murinus
ENSSSCG00000037347	-	92	57.950	ENSMOCG00000018508	R3hcc1	98	57.950	Microtus_ochrogaster
ENSSSCG00000037347	-	88	46.501	ENSMODG00000016809	-	99	45.536	Monodelphis_domestica
ENSSSCG00000037347	-	92	57.083	MGP_CAROLIEiJ_G0019467	R3hcc1	98	57.588	Mus_caroli
ENSSSCG00000037347	-	92	57.796	ENSMUSG00000034194	R3hcc1	98	58.420	Mus_musculus
ENSSSCG00000037347	-	91	53.586	MGP_PahariEiJ_G0030484	R3hcc1	98	55.328	Mus_pahari
ENSSSCG00000037347	-	92	57.438	MGP_SPRETEiJ_G0020359	R3hcc1	98	58.058	Mus_spretus
ENSSSCG00000037347	-	89	74.654	ENSMPUG00000003457	R3HCC1	86	74.483	Mustela_putorius_furo
ENSSSCG00000037347	-	91	71.812	ENSMLUG00000000266	R3HCC1	93	72.545	Myotis_lucifugus
ENSSSCG00000037347	-	92	61.075	ENSNGAG00000016747	R3hcc1	99	61.720	Nannospalax_galili
ENSSSCG00000037347	-	84	75.556	ENSNLEG00000015944	R3HCC1	89	74.519	Nomascus_leucogenys
ENSSSCG00000037347	-	89	53.759	ENSMEUG00000010587	R3HCC1	98	53.075	Notamacropus_eugenii
ENSSSCG00000037347	-	92	63.474	ENSOPRG00000013390	R3HCC1	97	63.252	Ochotona_princeps
ENSSSCG00000037347	-	88	60.215	ENSODEG00000007529	R3HCC1	98	61.075	Octodon_degus
ENSSSCG00000037347	-	90	52.539	ENSOANG00000013877	R3HCC1	97	54.343	Ornithorhynchus_anatinus
ENSSSCG00000037347	-	93	66.000	ENSOCUG00000023554	R3HCC1	89	65.789	Oryctolagus_cuniculus
ENSSSCG00000037347	-	51	40.845	ENSORLG00000016816	r3hcc1	97	30.500	Oryzias_latipes
ENSSSCG00000037347	-	51	40.141	ENSORLG00020012005	r3hcc1	97	30.500	Oryzias_latipes_hni
ENSSSCG00000037347	-	83	30.952	ENSOMEG00000000816	r3hcc1	91	30.175	Oryzias_melastigma
ENSSSCG00000037347	-	89	67.816	ENSOGAG00000001291	R3HCC1	91	67.816	Otolemur_garnettii
ENSSSCG00000037347	-	89	76.092	ENSOARG00000010146	R3HCC1	96	75.973	Ovis_aries
ENSSSCG00000037347	-	91	72.584	ENSPPAG00000033165	R3HCC1	100	72.273	Pan_paniscus
ENSSSCG00000037347	-	92	71.973	ENSPPRG00000002522	R3HCC1	99	72.646	Panthera_pardus
ENSSSCG00000037347	-	84	69.586	ENSPTIG00000011230	R3HCC1	94	72.152	Panthera_tigris_altaica
ENSSSCG00000037347	-	91	73.034	ENSPTRG00000020076	R3HCC1	100	67.356	Pan_troglodytes
ENSSSCG00000037347	-	93	71.806	ENSPANG00000000453	R3HCC1	95	72.026	Papio_anubis
ENSSSCG00000037347	-	85	32.102	ENSPKIG00000014426	-	93	34.190	Paramormyrops_kingsleyae
ENSSSCG00000037347	-	84	32.547	ENSPKIG00000020397	-	96	32.547	Paramormyrops_kingsleyae
ENSSSCG00000037347	-	92	41.649	ENSPSIG00000017664	R3HCC1	98	42.641	Pelodiscus_sinensis
ENSSSCG00000037347	-	92	57.692	ENSPEMG00000007118	R3hcc1	98	59.499	Peromyscus_maniculatus_bairdii
ENSSSCG00000037347	-	85	43.318	ENSPCIG00000022718	-	85	46.265	Phascolarctos_cinereus
ENSSSCG00000037347	-	92	30.556	ENSPFOG00000022301	r3hcc1	90	31.944	Poecilia_formosa
ENSSSCG00000037347	-	87	31.422	ENSPLAG00000010794	r3hcc1	90	31.651	Poecilia_latipinna
ENSSSCG00000037347	-	92	30.556	ENSPMEG00000022515	r3hcc1	90	31.944	Poecilia_mexicana
ENSSSCG00000037347	-	92	31.435	ENSPREG00000000713	r3hcc1	93	30.508	Poecilia_reticulata
ENSSSCG00000037347	-	83	70.690	ENSPPYG00000018436	R3HCC1	100	70.690	Pongo_abelii
ENSSSCG00000037347	-	70	72.340	ENSPCAG00000012229	R3HCC1	73	75.862	Procavia_capensis
ENSSSCG00000037347	-	88	70.629	ENSPCOG00000027554	R3HCC1	97	70.163	Propithecus_coquereli
ENSSSCG00000037347	-	89	74.083	ENSPVAG00000009829	R3HCC1	95	74.083	Pteropus_vampyrus
ENSSSCG00000037347	-	54	43.089	ENSPNAG00000023875	r3hcc1	69	43.089	Pygocentrus_nattereri
ENSSSCG00000037347	-	93	56.998	ENSRNOG00000016777	AABR07018321.1	82	56.592	Rattus_norvegicus
ENSSSCG00000037347	-	90	73.182	ENSRBIG00000028045	R3HCC1	100	73.182	Rhinopithecus_bieti
ENSSSCG00000037347	-	93	72.467	ENSRROG00000031126	R3HCC1	100	66.437	Rhinopithecus_roxellana
ENSSSCG00000037347	-	90	70.682	ENSSBOG00000022590	R3HCC1	100	70.682	Saimiri_boliviensis_boliviensis
ENSSSCG00000037347	-	89	47.285	ENSSHAG00000016526	-	98	47.285	Sarcophilus_harrisii
ENSSSCG00000037347	-	87	32.353	ENSSFOG00015013507	r3hcc1	98	34.577	Scleropages_formosus
ENSSSCG00000037347	-	56	43.182	ENSSDUG00000022786	r3hcc1	64	43.939	Seriola_dumerili
ENSSSCG00000037347	-	56	43.182	ENSSLDG00000019031	r3hcc1	64	43.939	Seriola_lalandi_dorsalis
ENSSSCG00000037347	-	63	73.427	ENSSARG00000013514	-	70	73.427	Sorex_araneus
ENSSSCG00000037347	-	54	42.953	ENSSPAG00000013497	r3hcc1	68	42.953	Stegastes_partitus
ENSSSCG00000037347	-	86	31.043	ENSTRUG00000015880	r3hcc1	98	30.310	Takifugu_rubripes
ENSSSCG00000037347	-	89	72.018	ENSTTRG00000012247	R3HCC1	97	70.946	Tursiops_truncatus
ENSSSCG00000037347	-	88	72.960	ENSUAMG00000007344	R3HCC1	97	72.494	Ursus_americanus
ENSSSCG00000037347	-	92	71.875	ENSVVUG00000005056	R3HCC1	97	71.652	Vulpes_vulpes
ENSSSCG00000037347	-	84	31.894	ENSXCOG00000017626	r3hcc1	89	31.667	Xiphophorus_couchianus
ENSSSCG00000037347	-	88	32.420	ENSXMAG00000018375	r3hcc1	91	32.420	Xiphophorus_maculatus