EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSSSCG00000037653 (Gene tree)
Gene ID
100144499
Gene Symbol
RAB5A
Alias
RAB5
Full Name
RAB5A%2C member RAS oncogene family
Gene Type
protein_coding
Species
Sus_scrofa
Status
putative
Strand
Plus strand
Length
36614 bases
Position
chr13:6905178-6941791
Accession
100144499
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSSCP00000034240MMR_HSR1PF01926.230.0001411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSSCT00000045035RAB5A-2014232XM_021068191ENSSSCP00000034240215 (aa)XP_020923850Q06AU6
Gene Model
Click here to download ENSSSCG00000037653's gene model file
Pathways
Pathway IDPathway NameSource
ssc04014Ras signaling pathwayKEGG
ssc04144EndocytosisKEGG
ssc04145PhagosomeKEGG
ssc04962Vasopressin-regulated water reabsorptionKEGG
ssc05014Amyotrophic lateral sclerosis (ALS)KEGG
ssc05146AmoebiasisKEGG
ssc05152TuberculosisKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000037653's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSSCG00000037653RAB5A5830.000ENSSSCG00000005012ARF68030.000
ENSSSCG00000037653RAB5A5531.967ENSSSCG00000036967ARL8A6231.967
ENSSSCG00000037653RAB5A9142.233ENSSSCG00000032312RAB11A9442.233
ENSSSCG00000037653RAB5A9044.388ENSSSCG00000012954RAB1B9644.388
ENSSSCG00000037653RAB5A8140.782ENSSSCG00000011615RAB7A8640.782
ENSSSCG00000037653RAB5A7541.615ENSSSCG00000006232RAB2A9737.306
ENSSSCG00000037653RAB5A9033.831ENSSSCG00000012123RAB9A9733.831
ENSSSCG00000037653RAB5A7333.121ENSSSCG00000016434RHEB8533.121
ENSSSCG00000037653RAB5A8342.703ENSSSCG00000028655RAB188843.407
ENSSSCG00000037653RAB5A7440.881ENSSSCG00000002280RAB157540.881
ENSSSCG00000037653RAB5A8033.333ENSSSCG00000010048RAB366533.333
ENSSSCG00000037653RAB5A7740.351ENSSSCG00000020711RAB33B7540.351
ENSSSCG00000037653RAB5A9035.821ENSSSCG00000032672RAB9B9735.821
ENSSSCG00000037653RAB5A8130.939ENSSSCG00000031513HRAS9530.939
ENSSSCG00000037653RAB5A7541.566ENSSSCG00000012658RAB33A6041.566
ENSSSCG00000037653RAB5A7533.129ENSSSCG00000032477NRAS8533.129
ENSSSCG00000037653RAB5A7636.145ENSSSCG00000024233RAB39B7836.145
ENSSSCG00000037653RAB5A5633.065ENSSSCG00000011535-6333.065
ENSSSCG00000037653RAB5A7331.288ENSSSCG00000008577DNAJC279231.288
ENSSSCG00000037653RAB5A8031.844ENSSSCG00000026969KRAS9431.844
ENSSSCG00000037653RAB5A7535.673ENSSSCG00000030432-7835.673
ENSSSCG00000037653RAB5A9540.758ENSSSCG00000014828RAB6A9840.758
ENSSSCG00000037653RAB5A7842.515ENSSSCG00000029544RAB2B7944.079
ENSSSCG00000037653RAB5A8044.186ENSSSCG00000014900RAB308544.186
ENSSSCG00000037653RAB5A7837.500ENSSSCG00000038026RAB126937.500
ENSSSCG00000037653RAB5A9042.857ENSSSCG00000008359RAB1A9842.857
ENSSSCG00000037653RAB5A7437.500ENSSSCG00000029539RAB237337.500
ENSSSCG00000037653RAB5A7134.868ENSSSCG00000025041-8734.868
ENSSSCG00000037653RAB5A9041.294ENSSSCG00000039186RAB259341.294
ENSSSCG00000037653RAB5A9049.744ENSSSCG00000007513RAB22A9849.744
ENSSSCG00000037653RAB5A7331.875ENSSSCG00000017769RAB346231.875
ENSSSCG00000037653RAB5A8940.415ENSSSCG00000006564-9540.415
ENSSSCG00000037653RAB5A10087.037ENSSSCG00000032467RAB5C10087.037
ENSSSCG00000037653RAB5A8938.119ENSSSCG00000005514RAB149438.119
ENSSSCG00000037653RAB5A5530.159ENSSSCG00000032709ARL4A6030.159
ENSSSCG00000037653RAB5A9141.748ENSSSCG00000013600RAB11B9441.748
ENSSSCG00000037653RAB5A8145.143ENSSSCG00000036503RAB6B8445.143
ENSSSCG00000037653RAB5A7840.476ENSSSCG00000033876RAB358340.476
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSSCG00000037653RAB5A10097.674ENSG00000144566RAB5A10097.674Homo_sapiens
ENSSSCG00000037653RAB5A10091.667ENSAPOG00000021391rab5aa10091.667Acanthochromis_polyacanthus
ENSSSCG00000037653RAB5A10098.605ENSAMEG00000000954RAB5A10098.605Ailuropoda_melanoleuca
ENSSSCG00000037653RAB5A10092.130ENSACIG00000019251rab5aa10092.130Amphilophus_citrinellus
ENSSSCG00000037653RAB5A10092.130ENSAOCG00000000090rab5aa10092.130Amphiprion_ocellaris
ENSSSCG00000037653RAB5A10092.130ENSAPEG00000013376rab5aa10092.130Amphiprion_percula
ENSSSCG00000037653RAB5A10092.130ENSATEG00000014748rab5aa10092.130Anabas_testudineus
ENSSSCG00000037653RAB5A10095.349ENSACAG00000000017RAB5A10095.349Anolis_carolinensis
ENSSSCG00000037653RAB5A10098.605ENSANAG00000025120RAB5A10098.605Aotus_nancymaae
ENSSSCG00000037653RAB5A10092.593ENSACLG00000018066rab5aa10092.593Astatotilapia_calliptera
ENSSSCG00000037653RAB5A10091.667ENSAMXG00000036179rab5aa10091.667Astyanax_mexicanus
ENSSSCG00000037653RAB5A10089.401ENSAMXG00000035919rab5ab10089.401Astyanax_mexicanus
ENSSSCG00000037653RAB5A10099.070ENSBTAG00000046385RAB5A10099.070Bos_taurus
ENSSSCG00000037653RAB5A10098.605ENSCJAG00000048394RAB5A10098.605Callithrix_jacchus
ENSSSCG00000037653RAB5A10098.605ENSCAFG00000005814RAB5A10098.605Canis_familiaris
ENSSSCG00000037653RAB5A10098.605ENSCAFG00020027287RAB5A10098.605Canis_lupus_dingo
ENSSSCG00000037653RAB5A10098.140ENSCHIG00000025419-10098.140Capra_hircus
ENSSSCG00000037653RAB5A10098.140ENSTSYG00000007642-10098.140Carlito_syrichta
ENSSSCG00000037653RAB5A10092.093ENSTSYG00000030238-10092.093Carlito_syrichta
ENSSSCG00000037653RAB5A10098.605ENSCCAG00000022405RAB5A10098.605Cebus_capucinus
ENSSSCG00000037653RAB5A10098.605ENSCATG00000033588-10098.605Cercocebus_atys
ENSSSCG00000037653RAB5A10097.674ENSCLAG00000006053-10097.674Chinchilla_lanigera
ENSSSCG00000037653RAB5A10098.605ENSCSAG00000009831RAB5A10098.605Chlorocebus_sabaeus
ENSSSCG00000037653RAB5A10094.419ENSCPBG00000022559RAB5A10094.419Chrysemys_picta_bellii
ENSSSCG00000037653RAB5A10098.605ENSCANG00000043514RAB5A10098.605Colobus_angolensis_palliatus
ENSSSCG00000037653RAB5A10096.744ENSCGRG00001020018-10096.744Cricetulus_griseus_chok1gshd
ENSSSCG00000037653RAB5A10096.744ENSCGRG00000002786-10096.744Cricetulus_griseus_crigri
ENSSSCG00000037653RAB5A9992.558ENSCVAG00000008239rab5aa9992.558Cyprinodon_variegatus
ENSSSCG00000037653RAB5A10092.130ENSDARG00000018602rab5aa10092.130Danio_rerio
ENSSSCG00000037653RAB5A9991.163ENSDARG00000007257rab5ab9991.163Danio_rerio
ENSSSCG00000037653RAB5A10098.140ENSDNOG00000038467RAB5A10098.140Dasypus_novemcinctus
ENSSSCG00000037653RAB5A10098.605ENSDORG00000024958-10098.605Dipodomys_ordii
ENSSSCG00000037653RAB5A10098.140ENSEASG00005005818RAB5A10098.140Equus_asinus_asinus
ENSSSCG00000037653RAB5A10098.605ENSECAG00000019062RAB5A10098.605Equus_caballus
ENSSSCG00000037653RAB5A10098.605ENSEEUG00000009044RAB5A10098.605Erinaceus_europaeus
ENSSSCG00000037653RAB5A10092.593ENSELUG00000006462rab5aa10092.593Esox_lucius
ENSSSCG00000037653RAB5A9991.163ENSELUG00000013436rab5ab9991.163Esox_lucius
ENSSSCG00000037653RAB5A10098.605ENSFCAG00000039795-10098.605Felis_catus
ENSSSCG00000037653RAB5A10095.349ENSFALG00000009239RAB5A10095.349Ficedula_albicollis
ENSSSCG00000037653RAB5A10097.674ENSFDAG00000005631-10097.674Fukomys_damarensis
ENSSSCG00000037653RAB5A9992.093ENSFHEG00000014070rab5aa9992.093Fundulus_heteroclitus
ENSSSCG00000037653RAB5A8493.923ENSGMOG00000007127RAB5A9993.923Gadus_morhua
ENSSSCG00000037653RAB5A9990.698ENSGMOG00000002868rab5aa9990.698Gadus_morhua
ENSSSCG00000037653RAB5A10095.349ENSGALG00000011272RAB5A10095.349Gallus_gallus
ENSSSCG00000037653RAB5A9992.093ENSGAFG00000011619rab5aa9992.093Gambusia_affinis
ENSSSCG00000037653RAB5A10090.741ENSGACG00000004997rab5aa10090.741Gasterosteus_aculeatus
ENSSSCG00000037653RAB5A10094.884ENSGAGG00000005319RAB5A10094.884Gopherus_agassizii
ENSSSCG00000037653RAB5A10097.674ENSGGOG00000015981RAB5A10097.674Gorilla_gorilla
ENSSSCG00000037653RAB5A10092.593ENSHBUG00000003752rab5aa10092.593Haplochromis_burtoni
ENSSSCG00000037653RAB5A9990.187ENSHGLG00000017749-9790.187Heterocephalus_glaber_female
ENSSSCG00000037653RAB5A9798.558ENSHGLG00000006357-10098.558Heterocephalus_glaber_female
ENSSSCG00000037653RAB5A10098.605ENSHGLG00100007553RAB5A10098.605Heterocephalus_glaber_male
ENSSSCG00000037653RAB5A9990.187ENSHGLG00100008816-9790.187Heterocephalus_glaber_male
ENSSSCG00000037653RAB5A10089.862ENSIPUG00000023392rab5a10089.862Ictalurus_punctatus
ENSSSCG00000037653RAB5A10099.070ENSSTOG00000026229RAB5A10099.070Ictidomys_tridecemlineatus
ENSSSCG00000037653RAB5A10095.349ENSJJAG00000020190Rab5a10095.349Jaculus_jaculus
ENSSSCG00000037653RAB5A10092.130ENSKMAG00000005111rab5aa10092.130Kryptolebias_marmoratus
ENSSSCG00000037653RAB5A9891.905ENSLBEG00000002516rab5aa9391.905Labrus_bergylta
ENSSSCG00000037653RAB5A10093.519ENSLACG00000004663RAB5A10093.519Latimeria_chalumnae
ENSSSCG00000037653RAB5A10092.593ENSLOCG00000006591rab5ab10092.593Lepisosteus_oculatus
ENSSSCG00000037653RAB5A10099.070ENSLAFG00000008321RAB5A10099.070Loxodonta_africana
ENSSSCG00000037653RAB5A10098.605ENSMFAG00000002326RAB5A10098.605Macaca_fascicularis
ENSSSCG00000037653RAB5A6995.302ENSMMUG00000032398-8795.302Macaca_mulatta
ENSSSCG00000037653RAB5A8399.441ENSMMUG00000006992RAB5A9199.441Macaca_mulatta
ENSSSCG00000037653RAB5A10098.605ENSMNEG00000039149-10098.605Macaca_nemestrina
ENSSSCG00000037653RAB5A10098.605ENSMLEG00000028944RAB5A10098.605Mandrillus_leucophaeus
ENSSSCG00000037653RAB5A10092.130ENSMAMG00000012573rab5aa10092.130Mastacembelus_armatus
ENSSSCG00000037653RAB5A10092.593ENSMZEG00005005205rab5aa10092.593Maylandia_zebra
ENSSSCG00000037653RAB5A10095.814ENSMGAG00000010961RAB5A10095.814Meleagris_gallopavo
ENSSSCG00000037653RAB5A10097.674ENSMAUG00000011242-10097.674Mesocricetus_auratus
ENSSSCG00000037653RAB5A10098.605ENSMICG00000049130RAB5A10098.605Microcebus_murinus
ENSSSCG00000037653RAB5A10097.209ENSMOCG00000009706Rab5a10097.209Microtus_ochrogaster
ENSSSCG00000037653RAB5A10090.741ENSMMOG00000019135rab5aa10090.741Mola_mola
ENSSSCG00000037653RAB5A10097.209ENSMODG00000014793RAB5A10097.209Monodelphis_domestica
ENSSSCG00000037653RAB5A10090.741ENSMALG00000014929rab5aa10090.741Monopterus_albus
ENSSSCG00000037653RAB5A10097.674MGP_CAROLIEiJ_G0021741Rab5a10097.674Mus_caroli
ENSSSCG00000037653RAB5A10097.674ENSMUSG00000017831Rab5a10097.674Mus_musculus
ENSSSCG00000037653RAB5A8796.237MGP_PahariEiJ_G0020730Rab5a9996.237Mus_pahari
ENSSSCG00000037653RAB5A10098.605ENSMPUG00000013147RAB5A10098.605Mustela_putorius_furo
ENSSSCG00000037653RAB5A10098.605ENSMLUG00000011716RAB5A10098.605Myotis_lucifugus
ENSSSCG00000037653RAB5A10097.674ENSNGAG00000021245-10097.674Nannospalax_galili
ENSSSCG00000037653RAB5A10092.593ENSNBRG00000011763rab5aa10092.593Neolamprologus_brichardi
ENSSSCG00000037653RAB5A10098.140ENSNLEG00000003434RAB5A10098.140Nomascus_leucogenys
ENSSSCG00000037653RAB5A8299.435ENSOPRG00000011278RAB5A10099.435Ochotona_princeps
ENSSSCG00000037653RAB5A68100.000ENSODEG00000000290-99100.000Octodon_degus
ENSSSCG00000037653RAB5A8789.474ENSODEG00000019065-10089.474Octodon_degus
ENSSSCG00000037653RAB5A10092.593ENSONIG00000002425rab5aa10092.593Oreochromis_niloticus
ENSSSCG00000037653RAB5A9995.755ENSOANG00000004989RAB5A9795.755Ornithorhynchus_anatinus
ENSSSCG00000037653RAB5A10098.605ENSOCUG00000012200RAB5A10098.605Oryctolagus_cuniculus
ENSSSCG00000037653RAB5A10091.204ENSORLG00000012261rab5aa10091.204Oryzias_latipes
ENSSSCG00000037653RAB5A10091.204ENSORLG00020020922rab5aa10091.204Oryzias_latipes_hni
ENSSSCG00000037653RAB5A10089.815ENSORLG00015017737rab5ab10089.815Oryzias_latipes_hsok
ENSSSCG00000037653RAB5A10091.204ENSORLG00015012854rab5aa10091.204Oryzias_latipes_hsok
ENSSSCG00000037653RAB5A10092.130ENSOMEG00000010692rab5aa10092.130Oryzias_melastigma
ENSSSCG00000037653RAB5A10098.140ENSOARG00000015722RAB5A10098.140Ovis_aries
ENSSSCG00000037653RAB5A10097.222ENSPPAG00000041763RAB5A10097.222Pan_paniscus
ENSSSCG00000037653RAB5A10098.605ENSPPRG00000001655-10098.605Panthera_pardus
ENSSSCG00000037653RAB5A10098.605ENSPTIG00000021685RAB5A10098.605Panthera_tigris_altaica
ENSSSCG00000037653RAB5A10097.222ENSPTRG00000014682RAB5A10097.222Pan_troglodytes
ENSSSCG00000037653RAB5A10098.605ENSPANG00000001328RAB5A10098.605Papio_anubis
ENSSSCG00000037653RAB5A10089.352ENSPKIG00000010291RAB5A10089.352Paramormyrops_kingsleyae
ENSSSCG00000037653RAB5A10092.130ENSPKIG00000009578rab5ab10092.130Paramormyrops_kingsleyae
ENSSSCG00000037653RAB5A10095.349ENSPSIG00000007157RAB5A10095.349Pelodiscus_sinensis
ENSSSCG00000037653RAB5A10092.130ENSPMGG00000001915rab5aa10092.130Periophthalmus_magnuspinnatus
ENSSSCG00000037653RAB5A10098.140ENSPCIG00000018321RAB5A10098.140Phascolarctos_cinereus
ENSSSCG00000037653RAB5A9992.558ENSPFOG00000011263rab5aa9992.558Poecilia_formosa
ENSSSCG00000037653RAB5A9992.558ENSPLAG00000017838rab5aa9992.558Poecilia_latipinna
ENSSSCG00000037653RAB5A9992.558ENSPMEG00000007238rab5aa9992.558Poecilia_mexicana
ENSSSCG00000037653RAB5A10098.140ENSPPYG00000014074RAB5A10098.140Pongo_abelii
ENSSSCG00000037653RAB5A10098.605ENSPCOG00000013289RAB5A10098.605Propithecus_coquereli
ENSSSCG00000037653RAB5A10098.140ENSPVAG00000006730RAB5A10098.140Pteropus_vampyrus
ENSSSCG00000037653RAB5A10092.593ENSPNYG00000010612rab5aa10092.593Pundamilia_nyererei
ENSSSCG00000037653RAB5A10091.667ENSPNAG00000023223rab5aa10091.667Pygocentrus_nattereri
ENSSSCG00000037653RAB5A10089.401ENSPNAG00000009496rab5ab10089.401Pygocentrus_nattereri
ENSSSCG00000037653RAB5A10098.605ENSRBIG00000036122RAB5A10098.605Rhinopithecus_bieti
ENSSSCG00000037653RAB5A10098.605ENSRROG00000037687RAB5A10098.605Rhinopithecus_roxellana
ENSSSCG00000037653RAB5A10097.685ENSSHAG00000006787RAB5A10097.685Sarcophilus_harrisii
ENSSSCG00000037653RAB5A10092.130ENSSFOG00015014517rab5a10092.130Scleropages_formosus
ENSSSCG00000037653RAB5A9890.995ENSSFOG00015021115-9890.995Scleropages_formosus
ENSSSCG00000037653RAB5A10091.667ENSSMAG00000009229rab5aa10091.667Scophthalmus_maximus
ENSSSCG00000037653RAB5A10092.130ENSSDUG00000009835rab5aa10092.130Seriola_dumerili
ENSSSCG00000037653RAB5A10092.130ENSSLDG00000011069rab5aa10092.130Seriola_lalandi_dorsalis
ENSSSCG00000037653RAB5A8798.396ENSSPUG00000001173RAB5A9698.396Sphenodon_punctatus
ENSSSCG00000037653RAB5A10091.204ENSSPAG00000015678rab5aa10091.204Stegastes_partitus
ENSSSCG00000037653RAB5A10094.884ENSTGUG00000003236RAB5A10094.884Taeniopygia_guttata
ENSSSCG00000037653RAB5A9990.698ENSTRUG00000024368rab5aa9990.698Takifugu_rubripes
ENSSSCG00000037653RAB5A10090.741ENSTNIG00000009196rab5aa10090.741Tetraodon_nigroviridis
ENSSSCG00000037653RAB5A10098.605ENSTTRG00000001374RAB5A10098.605Tursiops_truncatus
ENSSSCG00000037653RAB5A10092.576ENSUAMG00000027471RAB5A9997.814Ursus_americanus
ENSSSCG00000037653RAB5A10098.605ENSUMAG00000018295RAB5A10098.605Ursus_maritimus
ENSSSCG00000037653RAB5A10098.605ENSVVUG00000000489RAB5A10098.605Vulpes_vulpes
ENSSSCG00000037653RAB5A10093.519ENSXETG00000002305rab5a10093.519Xenopus_tropicalis
ENSSSCG00000037653RAB5A9992.093ENSXCOG00000020121rab5aa9992.093Xiphophorus_couchianus
ENSSSCG00000037653RAB5A9992.558ENSXMAG00000028889rab5aa9992.558Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0001726ruffle-IEAComponent
GO:0003924GTPase activity-ISSFunction
GO:0005525GTP binding-ISSFunction
GO:0005737cytoplasm-ISSComponent
GO:0005768endosome-ISSComponent
GO:0005769early endosome-ISSComponent
GO:0005829cytosol-IEAComponent
GO:0006897endocytosis-ISSProcess
GO:0006909phagocytosis-IEAProcess
GO:0015629actin cytoskeleton-IEAComponent
GO:0019003GDP binding-ISSFunction
GO:0030670phagocytic vesicle membrane-IEAComponent
GO:0032009early phagosome-ISSComponent
GO:0036465synaptic vesicle recycling-IEAProcess
GO:0039694viral RNA genome replication-IEAProcess
GO:0042470melanosome-IEAComponent
GO:0043195terminal bouton-IEAComponent
GO:0045022early endosome to late endosome transport-IEAProcess
GO:0045121membrane raft-IEAComponent
GO:0045335phagocytic vesicle-ISSComponent
GO:0045921positive regulation of exocytosis-IEAProcess
GO:0051036regulation of endosome size-IEAProcess
GO:0098559cytoplasmic side of early endosome membrane-IEAComponent
GO:0150093amyloid-beta clearance by transcytosis-IEAProcess
GO:2000286receptor internalization involved in canonical Wnt signaling pathway-IEAProcess
GO:2000300regulation of synaptic vesicle exocytosis-IEAProcess

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