EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000037686 (Gene tree)
Gene ID: 100623969
Gene Symbol: TBL3
Alias: SAZD|UTP13
Full Name: transducin beta like 3
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 10027 bases
Position: chr3:39986152-39996178
Accession: 100623969
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000043137	Utp13	PF08625.11	1.5e-39	1	1
ENSSSCP00000042019	Utp13	PF08625.11	1.8e-39	1	1
ENSSSCP00000053073	Utp13	PF08625.11	2.2e-39	1	1
ENSSSCP00000051733	Utp13	PF08625.11	2.4e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000038475	TBL3-201	6179	XM_021086785	ENSSSCP00000042019	800 (aa)	XP_020942444	A0A287ADD1
ENSSSCT00000051944	TBL3-204	6287	-	ENSSSCP00000053073	889 (aa)	-	A0A287BAF6
ENSSSCT00000063839	TBL3-202	5903	-	ENSSSCP00000043137	708 (aa)	-	A0A287AGY9
ENSSSCT00000042945	TBL3-203	6455	XM_021086788	ENSSSCP00000051733	945 (aa)	XP_020942447	A0A287B5K5

Gene Model

Click here to download ENSSSCG00000037686's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000037686's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000037686	TBL3	71	31.613	ENSSSCG00000024912	WDR5	94	30.055
ENSSSCG00000037686	TBL3	68	30.147	ENSSSCG00000024648	PRPF4	56	34.694

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000037686	TBL3	99	90.464	ENSG00000183751	TBL3	99	90.464	Homo_sapiens
ENSSSCG00000037686	TBL3	98	62.155	ENSAPOG00000021308	tbl3	85	62.861	Acanthochromis_polyacanthus
ENSSSCG00000037686	TBL3	97	90.862	ENSAMEG00000017654	TBL3	98	90.863	Ailuropoda_melanoleuca
ENSSSCG00000037686	TBL3	98	61.270	ENSACIG00000007459	tbl3	99	61.395	Amphilophus_citrinellus
ENSSSCG00000037686	TBL3	98	62.406	ENSAOCG00000000453	tbl3	85	62.406	Amphiprion_ocellaris
ENSSSCG00000037686	TBL3	98	62.108	ENSAPEG00000010228	tbl3	98	62.421	Amphiprion_percula
ENSSSCG00000037686	TBL3	98	61.452	ENSATEG00000024571	tbl3	94	61.186	Anabas_testudineus
ENSSSCG00000037686	TBL3	91	60.959	ENSAPLG00000008515	TBL3	98	60.959	Anas_platyrhynchos
ENSSSCG00000037686	TBL3	66	63.348	ENSACAG00000012119	-	82	63.348	Anolis_carolinensis
ENSSSCG00000037686	TBL3	99	90.290	ENSANAG00000030472	TBL3	99	90.290	Aotus_nancymaae
ENSSSCG00000037686	TBL3	98	61.021	ENSACLG00000027954	tbl3	99	58.052	Astatotilapia_calliptera
ENSSSCG00000037686	TBL3	98	61.412	ENSAMXG00000042589	tbl3	87	60.625	Astyanax_mexicanus
ENSSSCG00000037686	TBL3	100	91.125	ENSBTAG00000020366	TBL3	100	89.375	Bos_taurus
ENSSSCG00000037686	TBL3	97	31.461	WBGene00013143	Y53C12B.1	99	31.461	Caenorhabditis_elegans
ENSSSCG00000037686	TBL3	99	90.590	ENSCJAG00000015245	TBL3	99	90.590	Callithrix_jacchus
ENSSSCG00000037686	TBL3	99	89.937	ENSCAFG00000019430	TBL3	98	91.111	Canis_familiaris
ENSSSCG00000037686	TBL3	99	90.164	ENSCAFG00020026321	TBL3	99	90.164	Canis_lupus_dingo
ENSSSCG00000037686	TBL3	100	92.125	ENSCHIG00000007747	TBL3	98	92.125	Capra_hircus
ENSSSCG00000037686	TBL3	100	87.890	ENSTSYG00000036142	TBL3	99	87.890	Carlito_syrichta
ENSSSCG00000037686	TBL3	98	83.100	ENSCAPG00000016762	TBL3	97	82.890	Cavia_aperea
ENSSSCG00000037686	TBL3	100	89.125	ENSCPOG00000005998	TBL3	100	89.125	Cavia_porcellus
ENSSSCG00000037686	TBL3	99	90.966	ENSCCAG00000034486	TBL3	99	90.966	Cebus_capucinus
ENSSSCG00000037686	TBL3	99	90.464	ENSCATG00000031298	TBL3	99	90.464	Cercocebus_atys
ENSSSCG00000037686	TBL3	100	90.250	ENSCLAG00000013342	TBL3	100	90.250	Chinchilla_lanigera
ENSSSCG00000037686	TBL3	99	90.464	ENSCSAG00000011191	TBL3	99	90.464	Chlorocebus_sabaeus
ENSSSCG00000037686	TBL3	98	66.204	ENSCPBG00000000253	TBL3	98	65.539	Chrysemys_picta_bellii
ENSSSCG00000037686	TBL3	98	45.133	ENSCING00000009521	-	98	45.316	Ciona_intestinalis
ENSSSCG00000037686	TBL3	99	89.962	ENSCANG00000031169	TBL3	99	89.962	Colobus_angolensis_palliatus
ENSSSCG00000037686	TBL3	100	88.125	ENSCGRG00001021817	Tbl3	100	88.125	Cricetulus_griseus_chok1gshd
ENSSSCG00000037686	TBL3	100	88.125	ENSCGRG00000013364	Tbl3	100	88.125	Cricetulus_griseus_crigri
ENSSSCG00000037686	TBL3	98	60.497	ENSCSEG00000015634	tbl3	99	58.411	Cynoglossus_semilaevis
ENSSSCG00000037686	TBL3	98	61.606	ENSCVAG00000002720	tbl3	99	60.530	Cyprinodon_variegatus
ENSSSCG00000037686	TBL3	98	51.916	ENSDARG00000052344	tbl3	88	52.941	Danio_rerio
ENSSSCG00000037686	TBL3	86	73.813	ENSDNOG00000019996	TBL3	98	74.458	Dasypus_novemcinctus
ENSSSCG00000037686	TBL3	98	88.462	ENSDORG00000007377	Tbl3	99	87.563	Dipodomys_ordii
ENSSSCG00000037686	TBL3	98	32.187	FBgn0033454	CG1671	99	32.386	Drosophila_melanogaster
ENSSSCG00000037686	TBL3	99	89.524	ENSETEG00000019403	TBL3	87	89.524	Echinops_telfairi
ENSSSCG00000037686	TBL3	98	55.725	ENSEBUG00000003526	tbl3	91	55.290	Eptatretus_burgeri
ENSSSCG00000037686	TBL3	99	93.108	ENSEASG00005004649	TBL3	99	93.108	Equus_asinus_asinus
ENSSSCG00000037686	TBL3	99	92.857	ENSECAG00000019299	TBL3	99	92.857	Equus_caballus
ENSSSCG00000037686	TBL3	88	89.938	ENSEEUG00000000761	-	63	89.938	Erinaceus_europaeus
ENSSSCG00000037686	TBL3	98	49.744	ENSELUG00000007394	tbl3	97	50.143	Esox_lucius
ENSSSCG00000037686	TBL3	100	91.250	ENSFCAG00000011740	TBL3	100	91.250	Felis_catus
ENSSSCG00000037686	TBL3	98	64.430	ENSFALG00000003409	TBL3	98	64.322	Ficedula_albicollis
ENSSSCG00000037686	TBL3	100	89.250	ENSFDAG00000007751	TBL3	100	89.250	Fukomys_damarensis
ENSSSCG00000037686	TBL3	98	60.549	ENSFHEG00000002234	tbl3	85	60.549	Fundulus_heteroclitus
ENSSSCG00000037686	TBL3	98	49.050	ENSGMOG00000011562	tbl3	99	56.375	Gadus_morhua
ENSSSCG00000037686	TBL3	99	64.581	ENSGALG00000005558	TBL3	98	64.706	Gallus_gallus
ENSSSCG00000037686	TBL3	98	60.652	ENSGAFG00000020165	tbl3	87	63.305	Gambusia_affinis
ENSSSCG00000037686	TBL3	99	59.533	ENSGACG00000011960	tbl3	99	60.099	Gasterosteus_aculeatus
ENSSSCG00000037686	TBL3	98	65.069	ENSGAGG00000024028	TBL3	98	64.330	Gopherus_agassizii
ENSSSCG00000037686	TBL3	99	90.088	ENSGGOG00000009378	TBL3	99	90.088	Gorilla_gorilla
ENSSSCG00000037686	TBL3	98	60.897	ENSHBUG00000011872	tbl3	98	60.347	Haplochromis_burtoni
ENSSSCG00000037686	TBL3	100	88.875	ENSHGLG00000002431	TBL3	100	88.875	Heterocephalus_glaber_female
ENSSSCG00000037686	TBL3	100	87.500	ENSHGLG00100012878	TBL3	100	87.500	Heterocephalus_glaber_male
ENSSSCG00000037686	TBL3	98	61.347	ENSHCOG00000016689	tbl3	87	61.471	Hippocampus_comes
ENSSSCG00000037686	TBL3	98	59.199	ENSIPUG00000003568	TBL3	87	59.199	Ictalurus_punctatus
ENSSSCG00000037686	TBL3	100	90.250	ENSSTOG00000012964	TBL3	100	90.250	Ictidomys_tridecemlineatus
ENSSSCG00000037686	TBL3	100	87.250	ENSJJAG00000004124	Tbl3	100	87.250	Jaculus_jaculus
ENSSSCG00000037686	TBL3	99	60.124	ENSKMAG00000020117	tbl3	99	59.530	Kryptolebias_marmoratus
ENSSSCG00000037686	TBL3	98	60.223	ENSLBEG00000026742	tbl3	86	60.471	Labrus_bergylta
ENSSSCG00000037686	TBL3	99	61.923	ENSLACG00000000615	TBL3	99	61.923	Latimeria_chalumnae
ENSSSCG00000037686	TBL3	98	64.151	ENSLOCG00000008853	tbl3	86	64.151	Lepisosteus_oculatus
ENSSSCG00000037686	TBL3	100	87.500	ENSLAFG00000004699	TBL3	100	87.500	Loxodonta_africana
ENSSSCG00000037686	TBL3	99	91.217	ENSMFAG00000030302	TBL3	99	91.217	Macaca_fascicularis
ENSSSCG00000037686	TBL3	99	91.092	ENSMMUG00000007943	TBL3	99	91.092	Macaca_mulatta
ENSSSCG00000037686	TBL3	99	90.715	ENSMNEG00000032603	TBL3	99	90.715	Macaca_nemestrina
ENSSSCG00000037686	TBL3	98	91.060	ENSMLEG00000043359	TBL3	99	91.060	Mandrillus_leucophaeus
ENSSSCG00000037686	TBL3	98	60.719	ENSMAMG00000023507	tbl3	86	60.719	Mastacembelus_armatus
ENSSSCG00000037686	TBL3	98	60.772	ENSMZEG00005000630	tbl3	93	59.865	Maylandia_zebra
ENSSSCG00000037686	TBL3	99	63.795	ENSMGAG00000005694	TBL3	99	63.875	Meleagris_gallopavo
ENSSSCG00000037686	TBL3	100	87.875	ENSMAUG00000008718	Tbl3	100	87.875	Mesocricetus_auratus
ENSSSCG00000037686	TBL3	99	90.464	ENSMICG00000012787	TBL3	87	90.464	Microcebus_murinus
ENSSSCG00000037686	TBL3	100	89.000	ENSMOCG00000019634	Tbl3	100	89.000	Microtus_ochrogaster
ENSSSCG00000037686	TBL3	98	59.826	ENSMMOG00000007551	tbl3	99	59.038	Mola_mola
ENSSSCG00000037686	TBL3	99	73.821	ENSMODG00000016091	TBL3	99	73.821	Monodelphis_domestica
ENSSSCG00000037686	TBL3	98	60.399	ENSMALG00000007013	tbl3	86	60.818	Monopterus_albus
ENSSSCG00000037686	TBL3	99	88.734	MGP_CAROLIEiJ_G0021199	Tbl3	100	88.514	Mus_caroli
ENSSSCG00000037686	TBL3	99	88.861	ENSMUSG00000040688	Tbl3	100	88.514	Mus_musculus
ENSSSCG00000037686	TBL3	99	88.861	MGP_PahariEiJ_G0023516	Tbl3	100	88.639	Mus_pahari
ENSSSCG00000037686	TBL3	99	89.114	MGP_SPRETEiJ_G0022110	Tbl3	100	88.764	Mus_spretus
ENSSSCG00000037686	TBL3	99	89.962	ENSMPUG00000015545	TBL3	99	89.962	Mustela_putorius_furo
ENSSSCG00000037686	TBL3	100	90.000	ENSMLUG00000011684	TBL3	100	90.000	Myotis_lucifugus
ENSSSCG00000037686	TBL3	100	88.000	ENSNGAG00000002428	Tbl3	100	88.000	Nannospalax_galili
ENSSSCG00000037686	TBL3	99	58.549	ENSNBRG00000003173	tbl3	99	58.549	Neolamprologus_brichardi
ENSSSCG00000037686	TBL3	99	90.966	ENSNLEG00000008889	TBL3	99	90.966	Nomascus_leucogenys
ENSSSCG00000037686	TBL3	92	69.837	ENSMEUG00000004011	TBL3	99	69.837	Notamacropus_eugenii
ENSSSCG00000037686	TBL3	99	81.932	ENSOPRG00000002527	-	100	81.932	Ochotona_princeps
ENSSSCG00000037686	TBL3	100	88.625	ENSODEG00000013930	TBL3	100	88.625	Octodon_degus
ENSSSCG00000037686	TBL3	100	60.539	ENSONIG00000002319	tbl3	100	60.539	Oreochromis_niloticus
ENSSSCG00000037686	TBL3	97	65.500	ENSOANG00000009819	TBL3	99	65.672	Ornithorhynchus_anatinus
ENSSSCG00000037686	TBL3	98	61.146	ENSORLG00000009312	tbl3	95	65.106	Oryzias_latipes
ENSSSCG00000037686	TBL3	98	60.897	ENSORLG00020017711	tbl3	95	65.106	Oryzias_latipes_hni
ENSSSCG00000037686	TBL3	98	60.870	ENSORLG00015007004	tbl3	86	64.619	Oryzias_latipes_hsok
ENSSSCG00000037686	TBL3	98	61.366	ENSOMEG00000012684	tbl3	96	59.776	Oryzias_melastigma
ENSSSCG00000037686	TBL3	99	88.331	ENSOGAG00000010104	TBL3	99	88.331	Otolemur_garnettii
ENSSSCG00000037686	TBL3	81	82.569	ENSOARG00000017059	TBL3	100	82.569	Ovis_aries
ENSSSCG00000037686	TBL3	99	90.088	ENSPPAG00000041939	TBL3	99	90.088	Pan_paniscus
ENSSSCG00000037686	TBL3	100	90.625	ENSPPRG00000000893	TBL3	100	90.625	Panthera_pardus
ENSSSCG00000037686	TBL3	99	88.559	ENSPTIG00000010377	TBL3	100	88.559	Panthera_tigris_altaica
ENSSSCG00000037686	TBL3	99	90.088	ENSPTRG00000007621	TBL3	99	90.088	Pan_troglodytes
ENSSSCG00000037686	TBL3	99	90.943	ENSPANG00000007024	TBL3	98	90.943	Papio_anubis
ENSSSCG00000037686	TBL3	97	61.917	ENSPKIG00000000136	tbl3	87	62.043	Paramormyrops_kingsleyae
ENSSSCG00000037686	TBL3	98	63.556	ENSPSIG00000013024	TBL3	98	63.263	Pelodiscus_sinensis
ENSSSCG00000037686	TBL3	98	60.150	ENSPMGG00000020660	tbl3	97	59.850	Periophthalmus_magnuspinnatus
ENSSSCG00000037686	TBL3	99	88.931	ENSPEMG00000009768	Tbl3	99	89.400	Peromyscus_maniculatus_bairdii
ENSSSCG00000037686	TBL3	84	56.695	ENSPMAG00000004860	tbl3	93	52.557	Petromyzon_marinus
ENSSSCG00000037686	TBL3	99	75.284	ENSPCIG00000021811	TBL3	98	75.284	Phascolarctos_cinereus
ENSSSCG00000037686	TBL3	98	60.526	ENSPFOG00000009834	tbl3	86	60.750	Poecilia_formosa
ENSSSCG00000037686	TBL3	97	63.519	ENSPLAG00000016437	tbl3	86	60.750	Poecilia_latipinna
ENSSSCG00000037686	TBL3	98	60.526	ENSPMEG00000019513	tbl3	86	60.750	Poecilia_mexicana
ENSSSCG00000037686	TBL3	99	89.837	ENSPPYG00000006977	TBL3	99	89.837	Pongo_abelii
ENSSSCG00000037686	TBL3	99	90.213	ENSPCOG00000019749	TBL3	99	90.213	Propithecus_coquereli
ENSSSCG00000037686	TBL3	99	88.972	ENSPVAG00000016710	TBL3	99	88.972	Pteropus_vampyrus
ENSSSCG00000037686	TBL3	100	56.373	ENSPNYG00000017137	tbl3	100	56.373	Pundamilia_nyererei
ENSSSCG00000037686	TBL3	98	59.649	ENSPNAG00000017527	tbl3	98	57.697	Pygocentrus_nattereri
ENSSSCG00000037686	TBL3	100	88.125	ENSRNOG00000013429	Tbl3	100	88.125	Rattus_norvegicus
ENSSSCG00000037686	TBL3	99	84.586	ENSRBIG00000032982	TBL3	99	84.586	Rhinopithecus_bieti
ENSSSCG00000037686	TBL3	99	90.088	ENSRROG00000026697	TBL3	99	90.088	Rhinopithecus_roxellana
ENSSSCG00000037686	TBL3	95	30.061	YLR222C	-	98	30.184	Saccharomyces_cerevisiae
ENSSSCG00000037686	TBL3	99	91.468	ENSSBOG00000013923	TBL3	99	91.468	Saimiri_boliviensis_boliviensis
ENSSSCG00000037686	TBL3	99	73.325	ENSSHAG00000015266	TBL3	99	73.325	Sarcophilus_harrisii
ENSSSCG00000037686	TBL3	98	61.558	ENSSFOG00015023537	tbl3	85	61.558	Scleropages_formosus
ENSSSCG00000037686	TBL3	98	61.899	ENSSMAG00000014338	tbl3	99	61.947	Scophthalmus_maximus
ENSSSCG00000037686	TBL3	98	60.666	ENSSDUG00000008158	tbl3	86	65.042	Seriola_dumerili
ENSSSCG00000037686	TBL3	98	60.569	ENSSLDG00000023733	tbl3	99	62.579	Seriola_lalandi_dorsalis
ENSSSCG00000037686	TBL3	96	57.227	ENSSPUG00000012939	TBL3	98	69.697	Sphenodon_punctatus
ENSSSCG00000037686	TBL3	98	61.673	ENSSPAG00000010659	tbl3	86	61.673	Stegastes_partitus
ENSSSCG00000037686	TBL3	98	62.660	ENSTGUG00000006592	-	99	62.821	Taeniopygia_guttata
ENSSSCG00000037686	TBL3	98	59.530	ENSTRUG00000007010	tbl3	87	59.727	Takifugu_rubripes
ENSSSCG00000037686	TBL3	99	60.602	ENSTNIG00000018011	tbl3	99	60.602	Tetraodon_nigroviridis
ENSSSCG00000037686	TBL3	59	92.079	ENSTBEG00000000017	-	51	92.199	Tupaia_belangeri
ENSSSCG00000037686	TBL3	100	90.000	ENSTTRG00000011395	TBL3	99	90.000	Tursiops_truncatus
ENSSSCG00000037686	TBL3	99	91.508	ENSUAMG00000019276	TBL3	99	91.468	Ursus_americanus
ENSSSCG00000037686	TBL3	96	91.480	ENSUMAG00000022149	TBL3	99	85.768	Ursus_maritimus
ENSSSCG00000037686	TBL3	99	90.075	ENSVVUG00000009589	TBL3	99	90.075	Vulpes_vulpes
ENSSSCG00000037686	TBL3	99	55.515	ENSXETG00000007217	tbl3	97	55.433	Xenopus_tropicalis
ENSSSCG00000037686	TBL3	98	60.777	ENSXCOG00000010277	tbl3	99	63.519	Xiphophorus_couchianus
ENSSSCG00000037686	TBL3	98	61.028	ENSXMAG00000014866	tbl3	97	63.734	Xiphophorus_maculatus