EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000037861 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 1276 bases
Position: chr6:135485758-135487033
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000058273	Ribosomal_S27	PF01599.19	1.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000059079	-	432	-	ENSSSCP00000058273	143 (aa)	-	A0A287BQ87

Gene Model

Click here to download ENSSSCG00000037861's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000037861's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000037861	-	99	49.133	ENSSSCG00000034617	RPS27A	99	50.867
ENSSSCG00000037861	-	83	37.903	ENSSSCG00000022357	-	78	37.097
ENSSSCG00000037861	-	99	44.025	ENSSSCG00000035890	-	99	45.283
ENSSSCG00000037861	-	99	37.333	ENSSSCG00000036866	-	89	37.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000037861	-	77	36.441	ENSAMEG00000004505	-	95	36.441	Ailuropoda_melanoleuca
ENSSSCG00000037861	-	99	49.133	ENSBTAG00000015473	RPS27A	99	50.867	Bos_taurus
ENSSSCG00000037861	-	89	55.970	ENSCAPG00000014837	-	96	58.209	Cavia_aperea
ENSSSCG00000037861	-	81	54.545	ENSCATG00000040456	-	70	57.851	Cercocebus_atys
ENSSSCG00000037861	-	99	49.133	ENSCPBG00000020897	-	99	50.867	Chrysemys_picta_bellii
ENSSSCG00000037861	-	73	55.455	ENSCANG00000033266	-	99	58.182	Colobus_angolensis_palliatus
ENSSSCG00000037861	-	81	52.893	ENSMFAG00000004349	-	69	60.331	Macaca_fascicularis
ENSSSCG00000037861	-	65	60.204	ENSMMUG00000004807	-	66	58.678	Macaca_mulatta
ENSSSCG00000037861	-	93	51.111	ENSMOCG00000012967	-	72	52.713	Microtus_ochrogaster
ENSSSCG00000037861	-	89	48.120	ENSRNOG00000032132	AABR07037998.1	75	51.880	Rattus_norvegicus
ENSSSCG00000037861	-	57	63.218	ENSSARG00000004533	-	57	67.059	Sorex_araneus
ENSSSCG00000037861	-	99	49.133	ENSUMAG00000016807	-	99	50.867	Ursus_maritimus
ENSSSCG00000037861	-	93	54.286	ENSXETG00000004519	rps27a	75	58.209	Xenopus_tropicalis