EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000037862 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 5070 bases
Position: chrAEMK02000496.1:309451-314520
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000041764	RRP36	PF06102.12	6.5e-22	1	2
ENSSSCP00000041764	RRP36	PF06102.12	6.5e-22	2	2
ENSSSCP00000051739	RRP36	PF06102.12	7.3e-22	1	2
ENSSSCP00000051739	RRP36	PF06102.12	7.3e-22	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000045823	-	582	-	ENSSSCP00000041764	193 (aa)	-	A0A287AD77
ENSSSCT00000064105	-	600	-	ENSSSCP00000051739	199 (aa)	-	A0A287B5L0

Gene Model

Click here to download ENSSSCG00000037862's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000037862's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000037862	-	99	72.646	ENSSSCG00000001656	RRP36	91	72.687

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000037862	-	91	65.438	ENSG00000124541	RRP36	92	62.343	Homo_sapiens
ENSSSCG00000037862	-	84	43.878	ENSAPOG00000022015	rrp36	78	40.271	Acanthochromis_polyacanthus
ENSSSCG00000037862	-	97	40.724	ENSACIG00000020578	-	67	40.887	Amphilophus_citrinellus
ENSSSCG00000037862	-	87	44.279	ENSAOCG00000013439	rrp36	61	43.781	Amphiprion_ocellaris
ENSSSCG00000037862	-	87	44.279	ENSAPEG00000020996	rrp36	61	43.781	Amphiprion_percula
ENSSSCG00000037862	-	87	40.796	ENSATEG00000016946	rrp36	67	38.627	Anabas_testudineus
ENSSSCG00000037862	-	97	62.281	ENSANAG00000021773	RRP36	92	60.593	Aotus_nancymaae
ENSSSCG00000037862	-	87	44.505	ENSACLG00000008408	rrp36	82	44.505	Astatotilapia_calliptera
ENSSSCG00000037862	-	84	42.353	ENSACLG00000013982	RRP36	77	42.353	Astatotilapia_calliptera
ENSSSCG00000037862	-	99	67.713	ENSBTAG00000053873	RRP36	92	67.401	Bos_taurus
ENSSSCG00000037862	-	97	60.526	ENSCJAG00000004943	RRP36	93	58.898	Callithrix_jacchus
ENSSSCG00000037862	-	95	66.047	ENSCAFG00020011057	RRP36	91	65.198	Canis_lupus_dingo
ENSSSCG00000037862	-	99	60.444	ENSCHIG00000003210	-	92	60.352	Capra_hircus
ENSSSCG00000037862	-	99	51.442	ENSCHIG00000019781	-	93	51.659	Capra_hircus
ENSSSCG00000037862	-	99	63.136	ENSCHIG00000016354	-	92	63.136	Capra_hircus
ENSSSCG00000037862	-	95	60.889	ENSTSYG00000037176	RRP36	88	60.889	Carlito_syrichta
ENSSSCG00000037862	-	83	59.067	ENSCAPG00000010983	RRP36	83	61.140	Cavia_aperea
ENSSSCG00000037862	-	88	57.921	ENSCPOG00000025932	RRP36	89	59.901	Cavia_porcellus
ENSSSCG00000037862	-	97	62.719	ENSCCAG00000000048	RRP36	89	62.719	Cebus_capucinus
ENSSSCG00000037862	-	93	65.741	ENSCATG00000041903	RRP36	91	62.661	Cercocebus_atys
ENSSSCG00000037862	-	92	60.766	ENSCLAG00000013166	RRP36	92	62.201	Chinchilla_lanigera
ENSSSCG00000037862	-	95	65.455	ENSCSAG00000011553	RRP36	92	62.447	Chlorocebus_sabaeus
ENSSSCG00000037862	-	84	46.231	ENSCPBG00000003555	RRP36	53	46.231	Chrysemys_picta_bellii
ENSSSCG00000037862	-	81	31.122	ENSCING00000012193	-	76	31.122	Ciona_intestinalis
ENSSSCG00000037862	-	85	68.367	ENSCANG00000035127	RRP36	77	68.367	Colobus_angolensis_palliatus
ENSSSCG00000037862	-	85	64.286	ENSCGRG00001021461	Rrp36	85	64.286	Cricetulus_griseus_chok1gshd
ENSSSCG00000037862	-	85	64.286	ENSCGRG00000006286	Rrp36	85	64.286	Cricetulus_griseus_crigri
ENSSSCG00000037862	-	87	40.299	ENSCSEG00000001039	RRP36	74	36.948	Cynoglossus_semilaevis
ENSSSCG00000037862	-	85	37.000	ENSCVAG00000017798	rrp36	86	37.000	Cyprinodon_variegatus
ENSSSCG00000037862	-	88	39.706	ENSDARG00000032516	rrp36	62	41.089	Danio_rerio
ENSSSCG00000037862	-	89	56.373	ENSDORG00000012186	Rrp36	88	58.333	Dipodomys_ordii
ENSSSCG00000037862	-	91	31.308	FBgn0038235	CG8461	93	31.304	Drosophila_melanogaster
ENSSSCG00000037862	-	98	65.086	ENSEASG00005003169	RRP36	91	65.086	Equus_asinus_asinus
ENSSSCG00000037862	-	98	65.517	ENSECAG00000040238	RRP36	91	65.517	Equus_caballus
ENSSSCG00000037862	-	91	50.239	ENSEEUG00000010515	RRP36	84	50.239	Erinaceus_europaeus
ENSSSCG00000037862	-	90	41.546	ENSELUG00000016840	rrp36	64	38.889	Esox_lucius
ENSSSCG00000037862	-	99	64.912	ENSFCAG00000043818	RRP36	92	65.086	Felis_catus
ENSSSCG00000037862	-	83	62.694	ENSFDAG00000010380	RRP36	89	64.249	Fukomys_damarensis
ENSSSCG00000037862	-	60	39.597	ENSFHEG00000000761	rrp36	75	39.597	Fundulus_heteroclitus
ENSSSCG00000037862	-	87	39.303	ENSGAFG00000017817	rrp36	56	39.303	Gambusia_affinis
ENSSSCG00000037862	-	91	41.667	ENSGACG00000019603	RRP36	61	43.000	Gasterosteus_aculeatus
ENSSSCG00000037862	-	96	63.717	ENSGGOG00000037384	RRP36	89	63.717	Gorilla_gorilla
ENSSSCG00000037862	-	91	40.092	ENSHBUG00000008974	RRP36	74	36.885	Haplochromis_burtoni
ENSSSCG00000037862	-	85	63.452	ENSHGLG00000018082	RRP36	78	64.975	Heterocephalus_glaber_female
ENSSSCG00000037862	-	85	63.452	ENSHGLG00100019303	RRP36	78	64.975	Heterocephalus_glaber_male
ENSSSCG00000037862	-	92	35.714	ENSIPUG00000016548	rrp36	69	35.714	Ictalurus_punctatus
ENSSSCG00000037862	-	85	67.513	ENSSTOG00000009511	RRP36	84	67.513	Ictidomys_tridecemlineatus
ENSSSCG00000037862	-	87	59.296	ENSJJAG00000023363	Rrp36	88	61.307	Jaculus_jaculus
ENSSSCG00000037862	-	87	43.284	ENSKMAG00000006968	rrp36	57	43.284	Kryptolebias_marmoratus
ENSSSCG00000037862	-	84	36.444	ENSLBEG00000017728	-	60	36.444	Labrus_bergylta
ENSSSCG00000037862	-	88	42.439	ENSLACG00000001888	rrp36	63	43.415	Latimeria_chalumnae
ENSSSCG00000037862	-	84	45.128	ENSLOCG00000015862	RRP36	54	45.128	Lepisosteus_oculatus
ENSSSCG00000037862	-	85	62.755	ENSLAFG00000032704	RRP36	91	62.755	Loxodonta_africana
ENSSSCG00000037862	-	93	66.204	ENSMFAG00000003547	RRP36	93	61.765	Macaca_fascicularis
ENSSSCG00000037862	-	93	66.204	ENSMNEG00000044747	RRP36	93	61.765	Macaca_nemestrina
ENSSSCG00000037862	-	93	65.741	ENSMLEG00000034272	RRP36	93	61.345	Mandrillus_leucophaeus
ENSSSCG00000037862	-	87	43.781	ENSMAMG00000019157	-	60	41.071	Mastacembelus_armatus
ENSSSCG00000037862	-	91	40.092	ENSMZEG00005015204	RRP36	74	36.885	Maylandia_zebra
ENSSSCG00000037862	-	89	60.591	ENSMAUG00000003648	Rrp36	89	60.891	Mesocricetus_auratus
ENSSSCG00000037862	-	100	61.111	ENSMICG00000045230	RRP36	91	63.043	Microcebus_murinus
ENSSSCG00000037862	-	85	61.224	ENSMOCG00000002009	Rrp36	80	63.265	Microtus_ochrogaster
ENSSSCG00000037862	-	87	39.000	ENSMMOG00000018637	-	59	39.000	Mola_mola
ENSSSCG00000037862	-	68	46.309	ENSMODG00000029304	-	86	46.154	Monodelphis_domestica
ENSSSCG00000037862	-	87	40.796	ENSMALG00000008142	-	69	40.000	Monopterus_albus
ENSSSCG00000037862	-	100	57.018	MGP_CAROLIEiJ_G0021680	Rrp36	92	58.772	Mus_caroli
ENSSSCG00000037862	-	95	58.065	ENSMUSG00000023971	Rrp36	94	60.920	Mus_musculus
ENSSSCG00000037862	-	91	58.454	MGP_PahariEiJ_G0020671	Rrp36	90	60.386	Mus_pahari
ENSSSCG00000037862	-	95	57.143	MGP_SPRETEiJ_G0022592	Rrp36	88	59.447	Mus_spretus
ENSSSCG00000037862	-	56	70.642	ENSNGAG00000021177	-	68	74.747	Nannospalax_galili
ENSSSCG00000037862	-	85	67.857	ENSNLEG00000033289	RRP36	91	67.857	Nomascus_leucogenys
ENSSSCG00000037862	-	55	54.887	ENSMEUG00000007149	-	84	54.887	Notamacropus_eugenii
ENSSSCG00000037862	-	76	64.246	ENSOPRG00000002274	RRP36	88	56.481	Ochotona_princeps
ENSSSCG00000037862	-	92	57.895	ENSODEG00000015915	RRP36	92	59.330	Octodon_degus
ENSSSCG00000037862	-	87	40.796	ENSONIG00000015983	rrp36	68	39.631	Oreochromis_niloticus
ENSSSCG00000037862	-	87	42.000	ENSORLG00000029500	rrp36	70	40.164	Oryzias_latipes
ENSSSCG00000037862	-	87	43.500	ENSORLG00020017452	-	70	40.249	Oryzias_latipes_hni
ENSSSCG00000037862	-	87	43.500	ENSORLG00015016898	rrp36	70	40.249	Oryzias_latipes_hsok
ENSSSCG00000037862	-	87	44.000	ENSOMEG00000008623	RRP36	68	41.048	Oryzias_melastigma
ENSSSCG00000037862	-	91	62.085	ENSOGAG00000012699	RRP36	92	62.085	Otolemur_garnettii
ENSSSCG00000037862	-	85	65.217	ENSPPAG00000042831	-	78	65.217	Pan_paniscus
ENSSSCG00000037862	-	99	65.789	ENSPPRG00000014610	RRP36	92	65.948	Panthera_pardus
ENSSSCG00000037862	-	98	65.948	ENSPTIG00000010853	RRP36	92	65.948	Panthera_tigris_altaica
ENSSSCG00000037862	-	94	64.865	ENSPTRG00000018184	RRP36	92	62.762	Pan_troglodytes
ENSSSCG00000037862	-	93	66.204	ENSPANG00000025140	RRP36	93	61.765	Papio_anubis
ENSSSCG00000037862	-	99	41.964	ENSPKIG00000004303	rrp36	64	42.411	Paramormyrops_kingsleyae
ENSSSCG00000037862	-	84	38.021	ENSPMGG00000016870	rrp36	60	38.021	Periophthalmus_magnuspinnatus
ENSSSCG00000037862	-	95	62.037	ENSPEMG00000007015	Rrp36	92	62.037	Peromyscus_maniculatus_bairdii
ENSSSCG00000037862	-	90	54.589	ENSPCIG00000009179	RRP36	83	54.589	Phascolarctos_cinereus
ENSSSCG00000037862	-	87	40.000	ENSPFOG00000011959	rrp36	51	40.000	Poecilia_formosa
ENSSSCG00000037862	-	87	40.000	ENSPLAG00000023901	rrp36	56	40.000	Poecilia_latipinna
ENSSSCG00000037862	-	87	40.000	ENSPMEG00000024099	rrp36	55	40.000	Poecilia_mexicana
ENSSSCG00000037862	-	87	38.500	ENSPREG00000022787	rrp36	56	38.500	Poecilia_reticulata
ENSSSCG00000037862	-	85	68.528	ENSPPYG00000016628	RRP36	92	60.251	Pongo_abelii
ENSSSCG00000037862	-	97	60.538	ENSPCOG00000018401	RRP36	89	62.332	Propithecus_coquereli
ENSSSCG00000037862	-	99	64.732	ENSPVAG00000008714	RRP36	92	65.198	Pteropus_vampyrus
ENSSSCG00000037862	-	91	40.092	ENSPNYG00000018030	RRP36	74	36.885	Pundamilia_nyererei
ENSSSCG00000037862	-	100	38.655	ENSPNAG00000027207	rrp36	66	38.655	Pygocentrus_nattereri
ENSSSCG00000037862	-	99	60.268	ENSRNOG00000017836	Rrp36	90	60.268	Rattus_norvegicus
ENSSSCG00000037862	-	99	62.661	ENSRBIG00000040019	RRP36	91	62.661	Rhinopithecus_bieti
ENSSSCG00000037862	-	99	62.661	ENSRROG00000040721	RRP36	91	62.661	Rhinopithecus_roxellana
ENSSSCG00000037862	-	92	61.187	ENSSBOG00000030228	RRP36	88	61.187	Saimiri_boliviensis_boliviensis
ENSSSCG00000037862	-	93	37.915	ENSSFOG00015023058	rrp36	69	35.622	Scleropages_formosus
ENSSSCG00000037862	-	90	44.175	ENSSMAG00000020911	-	54	44.776	Scophthalmus_maximus
ENSSSCG00000037862	-	87	43.284	ENSSDUG00000018924	rrp36	54	43.284	Seriola_dumerili
ENSSSCG00000037862	-	83	43.814	ENSSLDG00000019741	RRP36	89	43.814	Seriola_lalandi_dorsalis
ENSSSCG00000037862	-	85	61.224	ENSSARG00000000873	RRP36	91	63.265	Sorex_araneus
ENSSSCG00000037862	-	87	45.000	ENSSPUG00000000213	RRP36	55	46.500	Sphenodon_punctatus
ENSSSCG00000037862	-	84	43.333	ENSSPAG00000017154	rrp36	73	44.041	Stegastes_partitus
ENSSSCG00000037862	-	92	36.323	ENSTRUG00000021893	rrp36	67	36.323	Takifugu_rubripes
ENSSSCG00000037862	-	97	37.931	ENSTNIG00000004741	rrp36	88	37.931	Tetraodon_nigroviridis
ENSSSCG00000037862	-	85	61.307	ENSTBEG00000012326	RRP36	91	62.245	Tupaia_belangeri
ENSSSCG00000037862	-	86	64.141	ENSTTRG00000007001	RRP36	88	66.055	Tursiops_truncatus
ENSSSCG00000037862	-	98	63.514	ENSUAMG00000015865	RRP36	92	62.996	Ursus_americanus
ENSSSCG00000037862	-	58	64.583	ENSUMAG00000008726	RRP36	88	64.583	Ursus_maritimus
ENSSSCG00000037862	-	85	69.898	ENSVPAG00000008904	RRP36	91	69.898	Vicugna_pacos
ENSSSCG00000037862	-	95	66.047	ENSVVUG00000027816	RRP36	91	65.198	Vulpes_vulpes
ENSSSCG00000037862	-	84	42.690	ENSXCOG00000011238	rrp36	81	42.690	Xiphophorus_couchianus
ENSSSCG00000037862	-	88	38.119	ENSXMAG00000013804	rrp36	50	33.333	Xiphophorus_maculatus