EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000038026 (Gene tree)
Gene ID: 110261168
Gene Symbol: RAB12
Alias: -
Full Name: RAB12%2C member RAS oncogene family
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 28797 bases
Position: chr6:99216163-99244959
Accession: 110261168
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000032849	MMR_HSR1	PF01926.23	3.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000066426	RAB12-201	2241	XM_021096067	ENSSSCP00000032849	244 (aa)	XP_020951726	A0A286ZMQ7

Gene Model

Click here to download ENSSSCG00000038026's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000038026's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000038026	RAB12	65	40.252	ENSSSCG00000014828	RAB6A	76	40.252
ENSSSCG00000038026	RAB12	70	51.744	ENSSSCG00000006564	-	84	51.744
ENSSSCG00000038026	RAB12	84	37.736	ENSSSCG00000013600	RAB11B	76	41.916
ENSSSCG00000038026	RAB12	63	31.169	ENSSSCG00000026969	KRAS	86	31.707
ENSSSCG00000038026	RAB12	75	44.624	ENSSSCG00000002280	RAB15	88	44.149
ENSSSCG00000038026	RAB12	90	36.444	ENSSSCG00000032467	RAB5C	85	38.421
ENSSSCG00000038026	RAB12	69	37.500	ENSSSCG00000037653	RAB5A	78	37.500
ENSSSCG00000038026	RAB12	65	37.736	ENSSSCG00000007513	RAB22A	81	37.736
ENSSSCG00000038026	RAB12	76	36.316	ENSSSCG00000011615	RAB7A	88	36.612
ENSSSCG00000038026	RAB12	82	32.536	ENSSSCG00000010048	RAB36	69	34.239
ENSSSCG00000038026	RAB12	65	39.623	ENSSSCG00000036503	RAB6B	76	39.623
ENSSSCG00000038026	RAB12	67	31.902	ENSSSCG00000025041	-	93	31.902
ENSSSCG00000038026	RAB12	67	49.697	ENSSSCG00000028655	RAB18	79	49.697
ENSSSCG00000038026	RAB12	70	50.000	ENSSSCG00000008359	RAB1A	85	50.296
ENSSSCG00000038026	RAB12	68	42.262	ENSSSCG00000024233	RAB39B	78	42.262
ENSSSCG00000038026	RAB12	84	38.164	ENSSSCG00000039186	RAB25	85	39.011
ENSSSCG00000038026	RAB12	81	40.102	ENSSSCG00000029544	RAB2B	80	47.097
ENSSSCG00000038026	RAB12	80	36.683	ENSSSCG00000020711	RAB33B	79	37.705
ENSSSCG00000038026	RAB12	69	43.452	ENSSSCG00000006232	RAB2A	81	45.161
ENSSSCG00000038026	RAB12	70	49.412	ENSSSCG00000012954	RAB1B	91	49.704
ENSSSCG00000038026	RAB12	70	45.614	ENSSSCG00000033876	RAB35	89	43.646
ENSSSCG00000038026	RAB12	61	30.464	ENSSSCG00000032477	NRAS	85	30.488
ENSSSCG00000038026	RAB12	65	41.104	ENSSSCG00000012658	RAB33A	59	41.104
ENSSSCG00000038026	RAB12	65	30.818	ENSSSCG00000016434	RHEB	85	30.818
ENSSSCG00000038026	RAB12	67	35.928	ENSSSCG00000032672	RAB9B	83	35.928
ENSSSCG00000038026	RAB12	68	35.119	ENSSSCG00000029539	RAB23	73	35.484
ENSSSCG00000038026	RAB12	83	31.068	ENSSSCG00000012123	RAB9A	83	34.132
ENSSSCG00000038026	RAB12	66	36.145	ENSSSCG00000017769	RAB34	63	36.145
ENSSSCG00000038026	RAB12	64	31.210	ENSSSCG00000027443	MRAS	80	31.548
ENSSSCG00000038026	RAB12	51	31.343	ENSSSCG00000031541	ARL5A	69	31.343
ENSSSCG00000038026	RAB12	69	37.853	ENSSSCG00000030432	-	80	37.853
ENSSSCG00000038026	RAB12	84	38.278	ENSSSCG00000032312	RAB11A	77	41.916
ENSSSCG00000038026	RAB12	86	36.321	ENSSSCG00000005514	RAB14	83	40.000
ENSSSCG00000038026	RAB12	74	47.778	ENSSSCG00000014900	RAB30	89	47.253

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000038026	RAB12	100	97.131	ENSG00000206418	RAB12	100	97.131	Homo_sapiens
ENSSSCG00000038026	RAB12	91	90.090	ENSAMEG00000007452	RAB12	96	90.090	Ailuropoda_melanoleuca
ENSSSCG00000038026	RAB12	91	88.789	ENSACIG00000020616	rab12	93	84.211	Amphilophus_citrinellus
ENSSSCG00000038026	RAB12	91	88.341	ENSAOCG00000002130	rab12	93	84.581	Amphiprion_ocellaris
ENSSSCG00000038026	RAB12	91	88.341	ENSAPEG00000013255	rab12	93	84.581	Amphiprion_percula
ENSSSCG00000038026	RAB12	100	84.016	ENSATEG00000019683	rab12	93	84.444	Anabas_testudineus
ENSSSCG00000038026	RAB12	91	96.833	ENSACAG00000003360	RAB12	100	87.984	Anolis_carolinensis
ENSSSCG00000038026	RAB12	91	88.789	ENSACLG00000007696	rab12	93	85.022	Astatotilapia_calliptera
ENSSSCG00000038026	RAB12	92	86.607	ENSAMXG00000004882	rab12	83	86.829	Astyanax_mexicanus
ENSSSCG00000038026	RAB12	100	97.951	ENSBTAG00000010356	RAB12	100	97.951	Bos_taurus
ENSSSCG00000038026	RAB12	100	96.735	ENSCJAG00000015468	RAB12	72	96.735	Callithrix_jacchus
ENSSSCG00000038026	RAB12	100	97.541	ENSCAFG00020023721	RAB12	84	97.541	Canis_lupus_dingo
ENSSSCG00000038026	RAB12	100	97.951	ENSCHIG00000016103	RAB12	100	97.951	Capra_hircus
ENSSSCG00000038026	RAB12	86	98.571	ENSCPOG00000022689	RAB12	100	98.571	Cavia_porcellus
ENSSSCG00000038026	RAB12	100	96.735	ENSCCAG00000022862	RAB12	100	96.735	Cebus_capucinus
ENSSSCG00000038026	RAB12	99	95.041	ENSCATG00000037784	RAB12	99	95.041	Cercocebus_atys
ENSSSCG00000038026	RAB12	100	95.565	ENSCSAG00000017569	RAB12	72	95.565	Chlorocebus_sabaeus
ENSSSCG00000038026	RAB12	100	91.837	ENSCPBG00000028375	RAB12	100	92.245	Chrysemys_picta_bellii
ENSSSCG00000038026	RAB12	90	98.182	ENSCANG00000031453	RAB12	100	98.182	Colobus_angolensis_palliatus
ENSSSCG00000038026	RAB12	100	95.902	ENSCGRG00001006958	Rab12	83	95.902	Cricetulus_griseus_chok1gshd
ENSSSCG00000038026	RAB12	91	88.789	ENSCSEG00000016933	rab12	100	80.894	Cynoglossus_semilaevis
ENSSSCG00000038026	RAB12	91	88.341	ENSCVAG00000003539	rab12	100	79.920	Cyprinodon_variegatus
ENSSSCG00000038026	RAB12	100	82.377	ENSDARG00000089428	rab12	93	82.667	Danio_rerio
ENSSSCG00000038026	RAB12	100	96.311	ENSDNOG00000046064	RAB12	56	96.311	Dasypus_novemcinctus
ENSSSCG00000038026	RAB12	93	98.678	ENSDORG00000008920	Rab12	100	98.678	Dipodomys_ordii
ENSSSCG00000038026	RAB12	76	68.649	ENSEBUG00000006581	rab12	92	66.839	Eptatretus_burgeri
ENSSSCG00000038026	RAB12	100	97.951	ENSEASG00005002926	RAB12	83	97.951	Equus_asinus_asinus
ENSSSCG00000038026	RAB12	100	97.951	ENSECAG00000007384	RAB12	71	97.951	Equus_caballus
ENSSSCG00000038026	RAB12	100	82.377	ENSELUG00000007123	rab12	93	82.667	Esox_lucius
ENSSSCG00000038026	RAB12	100	97.131	ENSFCAG00000027710	RAB12	72	97.131	Felis_catus
ENSSSCG00000038026	RAB12	90	88.128	ENSFHEG00000004319	rab12	100	79.839	Fundulus_heteroclitus
ENSSSCG00000038026	RAB12	85	85.096	ENSGMOG00000012335	rab12	87	85.096	Gadus_morhua
ENSSSCG00000038026	RAB12	100	92.000	ENSGALG00000033608	RAB12	100	91.600	Gallus_gallus
ENSSSCG00000038026	RAB12	82	86.070	ENSGACG00000016639	rab12	100	81.081	Gasterosteus_aculeatus
ENSSSCG00000038026	RAB12	100	91.837	ENSGAGG00000007278	RAB12	100	92.245	Gopherus_agassizii
ENSSSCG00000038026	RAB12	91	88.789	ENSHBUG00000008497	rab12	93	85.022	Haplochromis_burtoni
ENSSSCG00000038026	RAB12	99	89.712	ENSHGLG00000006189	RAB12	90	89.712	Heterocephalus_glaber_female
ENSSSCG00000038026	RAB12	100	81.707	ENSHCOG00000012376	rab12	100	77.236	Hippocampus_comes
ENSSSCG00000038026	RAB12	93	86.726	ENSIPUG00000017401	rab12	93	82.018	Ictalurus_punctatus
ENSSSCG00000038026	RAB12	93	95.595	ENSSTOG00000025122	RAB12	98	97.297	Ictidomys_tridecemlineatus
ENSSSCG00000038026	RAB12	93	97.807	ENSJJAG00000019064	Rab12	100	97.807	Jaculus_jaculus
ENSSSCG00000038026	RAB12	100	81.557	ENSKMAG00000020056	rab12	93	81.778	Kryptolebias_marmoratus
ENSSSCG00000038026	RAB12	100	84.426	ENSLBEG00000013756	rab12	93	84.444	Labrus_bergylta
ENSSSCG00000038026	RAB12	91	89.686	ENSLACG00000010461	RAB12	100	83.936	Latimeria_chalumnae
ENSSSCG00000038026	RAB12	100	85.081	ENSLOCG00000002680	rab12	100	85.081	Lepisosteus_oculatus
ENSSSCG00000038026	RAB12	100	96.341	ENSMFAG00000043551	RAB12	100	96.341	Macaca_fascicularis
ENSSSCG00000038026	RAB12	95	97.425	ENSMNEG00000040853	RAB12	92	97.425	Macaca_nemestrina
ENSSSCG00000038026	RAB12	100	84.016	ENSMAMG00000006862	rab12	93	84.000	Mastacembelus_armatus
ENSSSCG00000038026	RAB12	91	88.789	ENSMZEG00005024316	rab12	93	85.022	Maylandia_zebra
ENSSSCG00000038026	RAB12	84	97.549	ENSMGAG00000009197	RAB12	100	97.549	Meleagris_gallopavo
ENSSSCG00000038026	RAB12	100	96.311	ENSMAUG00000008371	Rab12	83	96.311	Mesocricetus_auratus
ENSSSCG00000038026	RAB12	98	96.234	ENSMICG00000030661	RAB12	99	95.781	Microcebus_murinus
ENSSSCG00000038026	RAB12	90	98.174	ENSMOCG00000000452	Rab12	100	98.174	Microtus_ochrogaster
ENSSSCG00000038026	RAB12	100	95.122	ENSMODG00000021452	RAB12	73	95.122	Monodelphis_domestica
ENSSSCG00000038026	RAB12	92	86.161	ENSMALG00000015762	rab12	93	83.628	Monopterus_albus
ENSSSCG00000038026	RAB12	100	96.721	MGP_CAROLIEiJ_G0021839	Rab12	84	96.721	Mus_caroli
ENSSSCG00000038026	RAB12	100	96.721	ENSMUSG00000023460	Rab12	100	96.721	Mus_musculus
ENSSSCG00000038026	RAB12	100	96.721	MGP_PahariEiJ_G0020826	Rab12	100	96.721	Mus_pahari
ENSSSCG00000038026	RAB12	100	96.721	MGP_SPRETEiJ_G0022750	Rab12	83	96.721	Mus_spretus
ENSSSCG00000038026	RAB12	100	97.951	ENSMLUG00000002883	RAB12	100	97.951	Myotis_lucifugus
ENSSSCG00000038026	RAB12	100	85.656	ENSNGAG00000019722	-	100	85.656	Nannospalax_galili
ENSSSCG00000038026	RAB12	95	94.850	ENSNGAG00000024103	-	96	97.321	Nannospalax_galili
ENSSSCG00000038026	RAB12	91	88.789	ENSNBRG00000014428	rab12	93	85.022	Neolamprologus_brichardi
ENSSSCG00000038026	RAB12	100	97.541	ENSNLEG00000006939	RAB12	100	97.541	Nomascus_leucogenys
ENSSSCG00000038026	RAB12	100	95.122	ENSMEUG00000000493	RAB12	100	94.309	Notamacropus_eugenii
ENSSSCG00000038026	RAB12	90	97.717	ENSODEG00000006414	RAB12	100	97.717	Octodon_degus
ENSSSCG00000038026	RAB12	91	88.789	ENSONIG00000018469	rab12	93	85.022	Oreochromis_niloticus
ENSSSCG00000038026	RAB12	100	84.016	ENSORLG00000003902	rab12	93	84.000	Oryzias_latipes
ENSSSCG00000038026	RAB12	91	88.789	ENSORLG00020005131	rab12	93	84.000	Oryzias_latipes_hni
ENSSSCG00000038026	RAB12	100	83.607	ENSORLG00015007869	rab12	93	83.556	Oryzias_latipes_hsok
ENSSSCG00000038026	RAB12	100	84.016	ENSOMEG00000008191	rab12	93	84.000	Oryzias_melastigma
ENSSSCG00000038026	RAB12	86	98.095	ENSOGAG00000028002	RAB12	99	98.095	Otolemur_garnettii
ENSSSCG00000038026	RAB12	86	97.619	ENSOARG00000000728	RAB12	99	90.083	Ovis_aries
ENSSSCG00000038026	RAB12	84	98.544	ENSPPAG00000009152	RAB12	97	98.544	Pan_paniscus
ENSSSCG00000038026	RAB12	100	97.131	ENSPPRG00000024521	RAB12	100	97.131	Panthera_pardus
ENSSSCG00000038026	RAB12	100	97.131	ENSPTRG00000009853	RAB12	100	97.131	Pan_troglodytes
ENSSSCG00000038026	RAB12	100	96.356	ENSPANG00000009320	RAB12	100	96.356	Papio_anubis
ENSSSCG00000038026	RAB12	78	91.579	ENSPKIG00000008579	rab12	93	87.111	Paramormyrops_kingsleyae
ENSSSCG00000038026	RAB12	100	81.557	ENSPMGG00000001890	rab12	93	81.778	Periophthalmus_magnuspinnatus
ENSSSCG00000038026	RAB12	100	96.721	ENSPEMG00000021032	Rab12	84	96.721	Peromyscus_maniculatus_bairdii
ENSSSCG00000038026	RAB12	100	95.122	ENSPCIG00000010453	RAB12	61	94.715	Phascolarctos_cinereus
ENSSSCG00000038026	RAB12	100	82.591	ENSPFOG00000001579	rab12	100	80.162	Poecilia_formosa
ENSSSCG00000038026	RAB12	100	82.591	ENSPLAG00000013594	rab12	100	80.162	Poecilia_latipinna
ENSSSCG00000038026	RAB12	100	82.591	ENSPMEG00000010417	rab12	100	80.162	Poecilia_mexicana
ENSSSCG00000038026	RAB12	100	82.996	ENSPREG00000017487	rab12	100	80.162	Poecilia_reticulata
ENSSSCG00000038026	RAB12	100	97.131	ENSPPYG00000009015	-	72	97.131	Pongo_abelii
ENSSSCG00000038026	RAB12	100	96.721	ENSPCAG00000015007	RAB12	100	96.721	Procavia_capensis
ENSSSCG00000038026	RAB12	100	97.541	ENSPCOG00000019816	RAB12	100	97.541	Propithecus_coquereli
ENSSSCG00000038026	RAB12	100	97.131	ENSPVAG00000002757	RAB12	100	97.131	Pteropus_vampyrus
ENSSSCG00000038026	RAB12	91	88.789	ENSPNYG00000023905	rab12	93	85.022	Pundamilia_nyererei
ENSSSCG00000038026	RAB12	91	88.789	ENSPNYG00000005654	rab12	93	85.022	Pundamilia_nyererei
ENSSSCG00000038026	RAB12	92	87.946	ENSPNAG00000015031	rab12	83	88.293	Pygocentrus_nattereri
ENSSSCG00000038026	RAB12	100	90.283	ENSRNOG00000019295	Rab12	100	89.879	Rattus_norvegicus
ENSSSCG00000038026	RAB12	95	97.425	ENSRBIG00000028760	RAB12	100	97.425	Rhinopithecus_bieti
ENSSSCG00000038026	RAB12	93	97.807	ENSRROG00000019249	RAB12	95	97.807	Rhinopithecus_roxellana
ENSSSCG00000038026	RAB12	93	91.228	ENSSBOG00000021125	RAB12	80	98.086	Saimiri_boliviensis_boliviensis
ENSSSCG00000038026	RAB12	92	93.805	ENSSHAG00000001489	RAB12	100	92.920	Sarcophilus_harrisii
ENSSSCG00000038026	RAB12	100	83.197	ENSSMAG00000012678	rab12	93	83.111	Scophthalmus_maximus
ENSSSCG00000038026	RAB12	100	84.426	ENSSDUG00000008505	rab12	93	84.444	Seriola_dumerili
ENSSSCG00000038026	RAB12	100	84.426	ENSSLDG00000022239	rab12	93	84.444	Seriola_lalandi_dorsalis
ENSSSCG00000038026	RAB12	100	92.276	ENSSPUG00000003222	RAB12	100	92.276	Sphenodon_punctatus
ENSSSCG00000038026	RAB12	91	88.789	ENSSPAG00000010822	rab12	93	85.022	Stegastes_partitus
ENSSSCG00000038026	RAB12	100	91.200	ENSTGUG00000009889	RAB12	100	90.800	Taeniopygia_guttata
ENSSSCG00000038026	RAB12	97	85.232	ENSTRUG00000024455	rab12	84	88.780	Takifugu_rubripes
ENSSSCG00000038026	RAB12	100	83.265	ENSTNIG00000014859	rab12	93	81.778	Tetraodon_nigroviridis
ENSSSCG00000038026	RAB12	91	97.748	ENSTTRG00000008711	RAB12	100	97.748	Tursiops_truncatus
ENSSSCG00000038026	RAB12	100	97.541	ENSUAMG00000018092	RAB12	100	97.541	Ursus_americanus
ENSSSCG00000038026	RAB12	92	96.444	ENSVVUG00000011748	RAB12	100	96.444	Vulpes_vulpes
ENSSSCG00000038026	RAB12	100	89.113	ENSXETG00000004289	rab12	72	95.556	Xenopus_tropicalis
ENSSSCG00000038026	RAB12	100	82.996	ENSXCOG00000019310	rab12	93	82.456	Xiphophorus_couchianus
ENSSSCG00000038026	RAB12	100	83.401	ENSXMAG00000023617	rab12	93	82.456	Xiphophorus_maculatus