EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000038035 (Gene tree)
Gene ID: 100620900
Gene Symbol: -
Alias: -
Full Name: elongation factor 1-alpha%2C somatic form-like
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 9506 bases
Position: chr6:81509567-81519072
Accession: 100620900
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000031315	GTP_EFTU	PF00009.27	7e-54	1	1
ENSSSCP00000031315	GTP_EFTU_D2	PF03144.25	3.4e-14	1	1
ENSSSCP00000031315	GTP_EFTU_D3	PF03143.17	1.9e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000063683	-	1365	XM_005656057	ENSSSCP00000031315	454 (aa)	XP_005656114	A0A286ZIH3

Gene Model

Click here to download ENSSSCG00000038035's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000038035's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000038035	-	99	84.348	ENSSSCG00000004489	-	99	85.169
ENSSSCG00000038035	-	94	31.136	ENSSSCG00000007803	TUFM	85	31.136
ENSSSCG00000038035	-	99	65.721	ENSSSCG00000031239	-	97	65.778
ENSSSCG00000038035	-	99	82.826	ENSSSCG00000040401	EEF1A2	98	83.186
ENSSSCG00000038035	-	95	36.343	ENSSSCG00000021118	GSPT1	67	36.343
ENSSSCG00000038035	-	92	35.915	ENSSSCG00000012317	GSPT2	64	35.831
ENSSSCG00000038035	-	53	58.333	ENSSSCG00000012570	-	80	74.468
ENSSSCG00000038035	-	91	39.474	ENSSSCG00000004169	HBS1L	63	39.713
ENSSSCG00000038035	-	100	83.514	ENSSSCG00000034113	-	98	83.628

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000038035	-	66	76.873	ENSAPOG00000004757	eef1a1l1	94	95.312	Acanthochromis_polyacanthus
ENSSSCG00000038035	-	100	75.652	ENSAMEG00000004317	-	98	75.831	Ailuropoda_melanoleuca
ENSSSCG00000038035	-	100	87.636	ENSAMEG00000009677	-	98	87.832	Ailuropoda_melanoleuca
ENSSSCG00000038035	-	100	88.503	ENSCAFG00000013249	-	98	88.717	Canis_familiaris
ENSSSCG00000038035	-	100	88.503	ENSCAFG00020020007	-	98	88.717	Canis_lupus_dingo
ENSSSCG00000038035	-	100	84.382	ENSCPBG00000000748	-	98	84.735	Chrysemys_picta_bellii
ENSSSCG00000038035	-	100	83.731	ENSCPBG00000000646	-	98	84.071	Chrysemys_picta_bellii
ENSSSCG00000038035	-	99	82.609	ENSDARG00000020850	eef1a1l1	98	82.743	Danio_rerio
ENSSSCG00000038035	-	85	78.173	ENSEASG00005018013	-	97	78.442	Equus_asinus_asinus
ENSSSCG00000038035	-	98	83.040	ENSEASG00005012365	-	96	83.886	Equus_asinus_asinus
ENSSSCG00000038035	-	100	81.128	ENSECAG00000022260	-	98	81.416	Equus_caballus
ENSSSCG00000038035	-	100	82.646	ENSELUG00000023536	eef1a1l1	98	82.743	Esox_lucius
ENSSSCG00000038035	-	100	82.430	ENSFCAG00000030530	-	97	83.036	Felis_catus
ENSSSCG00000038035	-	100	84.165	ENSGAGG00000000642	-	98	84.513	Gopherus_agassizii
ENSSSCG00000038035	-	100	83.514	ENSGAGG00000000648	-	98	83.850	Gopherus_agassizii
ENSSSCG00000038035	-	89	80.630	ENSLBEG00000002790	eef1a1l1	98	80.941	Labrus_bergylta
ENSSSCG00000038035	-	100	82.863	ENSLAFG00000025161	-	98	83.186	Loxodonta_africana
ENSSSCG00000038035	-	100	86.117	ENSLAFG00000028081	-	98	86.062	Loxodonta_africana
ENSSSCG00000038035	-	76	87.283	ENSOANG00000012066	-	100	87.283	Ornithorhynchus_anatinus
ENSSSCG00000038035	-	89	81.356	ENSOMEG00000006888	-	98	81.683	Oryzias_melastigma
ENSSSCG00000038035	-	100	82.430	ENSOARG00000002943	-	98	82.743	Ovis_aries
ENSSSCG00000038035	-	97	82.812	ENSPPRG00000005678	-	96	82.812	Panthera_pardus
ENSSSCG00000038035	-	100	89.648	ENSPPRG00000008525	-	98	89.888	Panthera_pardus
ENSSSCG00000038035	-	100	88.720	ENSPTIG00000006939	-	98	88.938	Panthera_tigris_altaica
ENSSSCG00000038035	-	100	83.297	ENSPSIG00000008610	-	98	83.628	Pelodiscus_sinensis
ENSSSCG00000038035	-	65	95.370	ENSPVAG00000007682	-	63	95.370	Pteropus_vampyrus
ENSSSCG00000038035	-	100	78.525	ENSSMAG00000018455	-	98	79.204	Scophthalmus_maximus
ENSSSCG00000038035	-	100	83.297	ENSSPUG00000003655	-	98	83.628	Sphenodon_punctatus
ENSSSCG00000038035	-	50	75.745	ENSUAMG00000006085	-	98	75.745	Ursus_americanus
ENSSSCG00000038035	-	100	85.900	ENSUAMG00000008928	-	98	86.062	Ursus_americanus
ENSSSCG00000038035	-	100	71.584	ENSUAMG00000007676	-	98	71.681	Ursus_americanus
ENSSSCG00000038035	-	100	88.069	ENSUMAG00000013211	-	98	88.274	Ursus_maritimus
ENSSSCG00000038035	-	100	88.286	ENSVVUG00000026886	-	98	88.496	Vulpes_vulpes
ENSSSCG00000038035	-	100	82.430	ENSXETG00000022604	eef1a1o	98	82.743	Xenopus_tropicalis