EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000038042 (Gene tree)
Gene ID: 100526062
Gene Symbol: MRPS18C
Alias: CGI-134|FLJ11146|FLJ22967|MRPS18-1
Full Name: mitochondrial ribosomal protein S18C
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 9718 bases
Position: chr8:135017007-135026724
Accession: 100526062
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000040839	Ribosomal_S18	PF01084.20	1.8e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000052284	MRPS18C-201	4063	XM_003129356	ENSSSCP00000040839	143 (aa)	XP_003129404	A0A0M3KL54

Gene Model

Click here to download ENSSSCG00000038042's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000038042's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000038042	MRPS18C	100	84.028	ENSG00000163319	MRPS18C	100	84.028	Homo_sapiens
ENSSSCG00000038042	MRPS18C	100	77.778	ENSAMEG00000004915	MRPS18C	100	77.778	Ailuropoda_melanoleuca
ENSSSCG00000038042	MRPS18C	100	72.222	ENSANAG00000028055	-	100	72.222	Aotus_nancymaae
ENSSSCG00000038042	MRPS18C	99	71.333	ENSANAG00000025323	-	95	71.333	Aotus_nancymaae
ENSSSCG00000038042	MRPS18C	100	86.014	ENSBTAG00000018155	MRPS18C	100	86.014	Bos_taurus
ENSSSCG00000038042	MRPS18C	100	62.238	ENSBTAG00000049836	-	100	62.238	Bos_taurus
ENSSSCG00000038042	MRPS18C	100	84.028	ENSCJAG00000042247	MRPS18C	97	84.028	Callithrix_jacchus
ENSSSCG00000038042	MRPS18C	100	86.713	ENSCAFG00020010491	MRPS18C	100	86.713	Canis_lupus_dingo
ENSSSCG00000038042	MRPS18C	90	91.473	ENSCHIG00000004461	-	90	91.473	Capra_hircus
ENSSSCG00000038042	MRPS18C	99	70.423	ENSCHIG00000018805	-	99	70.213	Capra_hircus
ENSSSCG00000038042	MRPS18C	100	75.524	ENSCHIG00000022740	-	100	75.524	Capra_hircus
ENSSSCG00000038042	MRPS18C	100	57.639	ENSCHIG00000016551	-	100	57.639	Capra_hircus
ENSSSCG00000038042	MRPS18C	75	75.000	ENSCHIG00000019359	-	98	75.000	Capra_hircus
ENSSSCG00000038042	MRPS18C	100	83.916	ENSTSYG00000012924	MRPS18C	100	83.916	Carlito_syrichta
ENSSSCG00000038042	MRPS18C	100	81.250	ENSCPOG00000009198	MRPS18C	100	81.250	Cavia_porcellus
ENSSSCG00000038042	MRPS18C	100	71.528	ENSCCAG00000028283	-	100	71.528	Cebus_capucinus
ENSSSCG00000038042	MRPS18C	100	84.028	ENSCCAG00000026577	-	100	84.028	Cebus_capucinus
ENSSSCG00000038042	MRPS18C	99	69.231	ENSCCAG00000025155	-	95	69.231	Cebus_capucinus
ENSSSCG00000038042	MRPS18C	100	81.250	ENSCCAG00000019347	-	100	81.250	Cebus_capucinus
ENSSSCG00000038042	MRPS18C	100	84.722	ENSCATG00000040697	MRPS18C	100	84.722	Cercocebus_atys
ENSSSCG00000038042	MRPS18C	100	81.507	ENSCLAG00000008205	-	100	81.507	Chinchilla_lanigera
ENSSSCG00000038042	MRPS18C	100	82.639	ENSCLAG00000017397	-	100	82.639	Chinchilla_lanigera
ENSSSCG00000038042	MRPS18C	99	61.268	ENSCANG00000037347	-	100	58.741	Colobus_angolensis_palliatus
ENSSSCG00000038042	MRPS18C	100	84.722	ENSCANG00000038907	MRPS18C	100	84.722	Colobus_angolensis_palliatus
ENSSSCG00000038042	MRPS18C	100	73.427	ENSCANG00000041165	-	100	73.427	Colobus_angolensis_palliatus
ENSSSCG00000038042	MRPS18C	100	82.639	ENSCGRG00001000103	Mrps18c	100	82.639	Cricetulus_griseus_chok1gshd
ENSSSCG00000038042	MRPS18C	100	82.639	ENSCGRG00000002192	Mrps18c	100	82.639	Cricetulus_griseus_crigri
ENSSSCG00000038042	MRPS18C	99	79.577	ENSDORG00000012749	Mrps18c	100	79.577	Dipodomys_ordii
ENSSSCG00000038042	MRPS18C	100	55.944	ENSETEG00000012223	-	100	55.944	Echinops_telfairi
ENSSSCG00000038042	MRPS18C	100	89.510	ENSEASG00005013234	MRPS18C	100	89.510	Equus_asinus_asinus
ENSSSCG00000038042	MRPS18C	100	90.210	ENSECAG00000020387	MRPS18C	100	90.210	Equus_caballus
ENSSSCG00000038042	MRPS18C	100	61.538	ENSEEUG00000003504	MRPS18C	99	61.538	Erinaceus_europaeus
ENSSSCG00000038042	MRPS18C	100	86.713	ENSFCAG00000042464	MRPS18C	100	86.713	Felis_catus
ENSSSCG00000038042	MRPS18C	100	81.250	ENSFDAG00000000250	-	100	81.250	Fukomys_damarensis
ENSSSCG00000038042	MRPS18C	100	70.629	ENSFDAG00000008778	-	100	70.629	Fukomys_damarensis
ENSSSCG00000038042	MRPS18C	100	68.750	ENSGGOG00000008603	MRPS18C	100	68.750	Gorilla_gorilla
ENSSSCG00000038042	MRPS18C	100	61.111	ENSGGOG00000040785	-	100	61.111	Gorilla_gorilla
ENSSSCG00000038042	MRPS18C	100	57.639	ENSGGOG00000037903	-	100	57.639	Gorilla_gorilla
ENSSSCG00000038042	MRPS18C	100	79.861	ENSHGLG00000020134	-	100	79.861	Heterocephalus_glaber_female
ENSSSCG00000038042	MRPS18C	100	75.000	ENSHGLG00000012671	-	98	75.000	Heterocephalus_glaber_female
ENSSSCG00000038042	MRPS18C	100	81.507	ENSHGLG00000002953	-	100	81.507	Heterocephalus_glaber_female
ENSSSCG00000038042	MRPS18C	100	79.861	ENSHGLG00100019678	-	100	79.861	Heterocephalus_glaber_male
ENSSSCG00000038042	MRPS18C	100	81.507	ENSHGLG00100016235	-	100	81.507	Heterocephalus_glaber_male
ENSSSCG00000038042	MRPS18C	100	75.000	ENSHGLG00100015568	-	98	75.000	Heterocephalus_glaber_male
ENSSSCG00000038042	MRPS18C	100	84.722	ENSSTOG00000007989	MRPS18C	100	84.722	Ictidomys_tridecemlineatus
ENSSSCG00000038042	MRPS18C	100	81.944	ENSLAFG00000001059	MRPS18C	100	81.944	Loxodonta_africana
ENSSSCG00000038042	MRPS18C	100	65.972	ENSMFAG00000041276	-	100	65.972	Macaca_fascicularis
ENSSSCG00000038042	MRPS18C	100	83.333	ENSMFAG00000003991	MRPS18C	100	83.333	Macaca_fascicularis
ENSSSCG00000038042	MRPS18C	100	66.667	ENSMMUG00000015353	MRPS18C	100	66.667	Macaca_mulatta
ENSSSCG00000038042	MRPS18C	100	76.389	ENSMMUG00000048717	-	100	76.389	Macaca_mulatta
ENSSSCG00000038042	MRPS18C	100	72.222	ENSMMUG00000039146	-	100	72.222	Macaca_mulatta
ENSSSCG00000038042	MRPS18C	100	83.333	ENSMNEG00000043663	MRPS18C	100	83.333	Macaca_nemestrina
ENSSSCG00000038042	MRPS18C	100	63.636	ENSMNEG00000018700	-	100	63.636	Macaca_nemestrina
ENSSSCG00000038042	MRPS18C	100	84.722	ENSMLEG00000038884	MRPS18C	100	84.722	Mandrillus_leucophaeus
ENSSSCG00000038042	MRPS18C	100	64.583	ENSMICG00000037615	-	100	64.583	Microcebus_murinus
ENSSSCG00000038042	MRPS18C	100	83.333	ENSMICG00000032609	-	100	83.333	Microcebus_murinus
ENSSSCG00000038042	MRPS18C	100	79.167	ENSMOCG00000009898	-	100	79.167	Microtus_ochrogaster
ENSSSCG00000038042	MRPS18C	100	79.861	ENSMOCG00000015591	-	100	79.861	Microtus_ochrogaster
ENSSSCG00000038042	MRPS18C	99	74.830	ENSMODG00000020773	MRPS18C	100	74.830	Monodelphis_domestica
ENSSSCG00000038042	MRPS18C	100	78.767	MGP_CAROLIEiJ_G0027458	Mrps18c	100	78.767	Mus_caroli
ENSSSCG00000038042	MRPS18C	100	78.767	ENSMUSG00000016833	Mrps18c	100	78.767	Mus_musculus
ENSSSCG00000038042	MRPS18C	100	80.137	MGP_PahariEiJ_G0017236	Mrps18c	100	80.137	Mus_pahari
ENSSSCG00000038042	MRPS18C	83	77.869	MGP_SPRETEiJ_G0028455	Mrps18c	93	77.869	Mus_spretus
ENSSSCG00000038042	MRPS18C	100	82.517	ENSMLUG00000017057	MRPS18C	100	82.517	Myotis_lucifugus
ENSSSCG00000038042	MRPS18C	86	86.290	ENSNGAG00000015980	Mrps18c	100	79.167	Nannospalax_galili
ENSSSCG00000038042	MRPS18C	100	77.778	ENSNLEG00000018188	-	100	77.778	Nomascus_leucogenys
ENSSSCG00000038042	MRPS18C	100	84.028	ENSNLEG00000009119	MRPS18C	100	84.028	Nomascus_leucogenys
ENSSSCG00000038042	MRPS18C	69	75.758	ENSOPRG00000004113	MRPS18C	68	75.758	Ochotona_princeps
ENSSSCG00000038042	MRPS18C	100	81.250	ENSODEG00000020349	-	100	81.250	Octodon_degus
ENSSSCG00000038042	MRPS18C	100	80.137	ENSODEG00000007599	-	100	80.137	Octodon_degus
ENSSSCG00000038042	MRPS18C	100	87.413	ENSOARG00000002770	MRPS18C	100	87.413	Ovis_aries
ENSSSCG00000038042	MRPS18C	100	84.028	ENSPPAG00000037122	MRPS18C	100	84.028	Pan_paniscus
ENSSSCG00000038042	MRPS18C	100	59.028	ENSPPAG00000037400	-	100	59.028	Pan_paniscus
ENSSSCG00000038042	MRPS18C	100	86.014	ENSPPRG00000011089	MRPS18C	100	86.014	Panthera_pardus
ENSSSCG00000038042	MRPS18C	100	86.014	ENSPTIG00000021242	MRPS18C	100	86.014	Panthera_tigris_altaica
ENSSSCG00000038042	MRPS18C	100	84.028	ENSPTRG00000016233	MRPS18C	100	84.028	Pan_troglodytes
ENSSSCG00000038042	MRPS18C	100	56.944	ENSPTRG00000047058	-	100	56.944	Pan_troglodytes
ENSSSCG00000038042	MRPS18C	100	84.028	ENSPANG00000033931	MRPS18C	100	84.028	Papio_anubis
ENSSSCG00000038042	MRPS18C	100	72.222	ENSPANG00000034202	-	100	72.222	Papio_anubis
ENSSSCG00000038042	MRPS18C	100	81.250	ENSPEMG00000008390	Mrps18c	100	81.250	Peromyscus_maniculatus_bairdii
ENSSSCG00000038042	MRPS18C	71	92.157	ENSPCIG00000019737	-	100	92.157	Phascolarctos_cinereus
ENSSSCG00000038042	MRPS18C	92	77.863	ENSPCIG00000005376	-	93	77.863	Phascolarctos_cinereus
ENSSSCG00000038042	MRPS18C	98	62.937	ENSPCIG00000000097	-	99	62.937	Phascolarctos_cinereus
ENSSSCG00000038042	MRPS18C	99	79.021	ENSPPYG00000025835	-	100	79.021	Pongo_abelii
ENSSSCG00000038042	MRPS18C	100	85.417	ENSPPYG00000025867	MRPS18C	100	85.417	Pongo_abelii
ENSSSCG00000038042	MRPS18C	100	76.389	ENSPCAG00000004975	MRPS18C	100	76.389	Procavia_capensis
ENSSSCG00000038042	MRPS18C	100	84.028	ENSPCOG00000017634	MRPS18C	100	84.028	Propithecus_coquereli
ENSSSCG00000038042	MRPS18C	69	84.694	ENSPVAG00000006439	MRPS18C	100	84.694	Pteropus_vampyrus
ENSSSCG00000038042	MRPS18C	100	76.712	ENSRNOG00000002178	Mrps18c	100	76.712	Rattus_norvegicus
ENSSSCG00000038042	MRPS18C	100	57.343	ENSRBIG00000031637	-	100	57.343	Rhinopithecus_bieti
ENSSSCG00000038042	MRPS18C	100	84.722	ENSRBIG00000041685	MRPS18C	100	84.722	Rhinopithecus_bieti
ENSSSCG00000038042	MRPS18C	100	74.825	ENSRBIG00000035023	-	100	74.825	Rhinopithecus_bieti
ENSSSCG00000038042	MRPS18C	100	84.722	ENSRROG00000044334	MRPS18C	100	84.722	Rhinopithecus_roxellana
ENSSSCG00000038042	MRPS18C	100	74.825	ENSRROG00000033834	-	100	74.825	Rhinopithecus_roxellana
ENSSSCG00000038042	MRPS18C	100	56.643	ENSRROG00000030722	-	100	56.643	Rhinopithecus_roxellana
ENSSSCG00000038042	MRPS18C	99	74.126	ENSSBOG00000022205	-	92	74.126	Saimiri_boliviensis_boliviensis
ENSSSCG00000038042	MRPS18C	100	83.333	ENSSBOG00000027568	-	100	83.333	Saimiri_boliviensis_boliviensis
ENSSSCG00000038042	MRPS18C	100	63.636	ENSSBOG00000029234	-	100	63.636	Saimiri_boliviensis_boliviensis
ENSSSCG00000038042	MRPS18C	99	69.930	ENSSBOG00000032292	-	100	69.930	Saimiri_boliviensis_boliviensis
ENSSSCG00000038042	MRPS18C	76	92.661	ENSSHAG00000007084	MRPS18C	76	92.661	Sarcophilus_harrisii
ENSSSCG00000038042	MRPS18C	100	81.250	ENSTBEG00000012505	MRPS18C	100	81.250	Tupaia_belangeri
ENSSSCG00000038042	MRPS18C	100	90.210	ENSTTRG00000004897	MRPS18C	100	90.210	Tursiops_truncatus
ENSSSCG00000038042	MRPS18C	100	90.909	ENSUAMG00000012878	MRPS18C	100	90.909	Ursus_americanus
ENSSSCG00000038042	MRPS18C	100	90.909	ENSUMAG00000008829	MRPS18C	100	90.909	Ursus_maritimus
ENSSSCG00000038042	MRPS18C	100	84.615	ENSVPAG00000011358	MRPS18C	100	84.615	Vicugna_pacos
ENSSSCG00000038042	MRPS18C	100	86.014	ENSVVUG00000015672	MRPS18C	100	86.014	Vulpes_vulpes