EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000038364 (Gene tree)
Gene ID: 110259217
Gene Symbol: -
Alias: -
Full Name: mitochondrial ribosomal protein L23
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 6044 bases
Position: chr2:1346905-1352948
Accession: 110259217
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000036849	Ribosomal_L23	PF00276.20	1.9e-12	1	1
ENSSSCP00000048679	Ribosomal_L23	PF00276.20	2.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000037403	-	1266	-	ENSSSCP00000048679	122 (aa)	-	A0A287AXQ8
ENSSSCT00000040484	-	453	XM_021082607	ENSSSCP00000036849	150 (aa)	XP_020938266	A0A286ZZC6

Gene Model

Click here to download ENSSSCG00000038364's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000038364's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000038364	-	100	79.221	ENSG00000214026	MRPL23	100	79.221	Homo_sapiens
ENSSSCG00000038364	-	97	63.087	ENSAPOG00000013198	mrpl23	97	63.087	Acanthochromis_polyacanthus
ENSSSCG00000038364	-	100	80.519	ENSAMEG00000002153	-	100	80.519	Ailuropoda_melanoleuca
ENSSSCG00000038364	-	100	65.359	ENSACIG00000024327	mrpl23	100	65.359	Amphilophus_citrinellus
ENSSSCG00000038364	-	97	63.087	ENSAOCG00000013679	mrpl23	97	63.087	Amphiprion_ocellaris
ENSSSCG00000038364	-	97	63.087	ENSAPEG00000010298	mrpl23	97	63.087	Amphiprion_percula
ENSSSCG00000038364	-	99	65.132	ENSATEG00000019314	mrpl23	99	65.132	Anabas_testudineus
ENSSSCG00000038364	-	89	62.832	ENSAPLG00000012955	-	97	62.832	Anas_platyrhynchos
ENSSSCG00000038364	-	63	76.596	ENSACAG00000009700	-	99	76.596	Anolis_carolinensis
ENSSSCG00000038364	-	96	77.703	ENSANAG00000010507	-	97	77.703	Aotus_nancymaae
ENSSSCG00000038364	-	97	64.430	ENSACLG00000002565	mrpl23	97	64.430	Astatotilapia_calliptera
ENSSSCG00000038364	-	67	67.000	ENSAMXG00000016759	mrpl23	69	66.667	Astyanax_mexicanus
ENSSSCG00000038364	-	84	82.075	ENSBTAG00000000103	MRPL23	100	82.075	Bos_taurus
ENSSSCG00000038364	-	71	39.130	WBGene00020348	mrpl-23	72	39.130	Caenorhabditis_elegans
ENSSSCG00000038364	-	100	84.967	ENSCAFG00000010086	-	100	84.967	Canis_familiaris
ENSSSCG00000038364	-	100	84.967	ENSCAFG00020017439	-	100	84.967	Canis_lupus_dingo
ENSSSCG00000038364	-	100	88.235	ENSCHIG00000019224	-	100	88.235	Capra_hircus
ENSSSCG00000038364	-	99	77.333	ENSTSYG00000030664	-	99	77.333	Carlito_syrichta
ENSSSCG00000038364	-	96	64.583	ENSCAPG00000012400	-	100	64.583	Cavia_aperea
ENSSSCG00000038364	-	100	79.333	ENSCPOG00000035162	-	100	79.333	Cavia_porcellus
ENSSSCG00000038364	-	100	81.579	ENSCCAG00000021662	-	100	81.579	Cebus_capucinus
ENSSSCG00000038364	-	100	73.333	ENSCATG00000019817	-	95	73.333	Cercocebus_atys
ENSSSCG00000038364	-	96	81.081	ENSCATG00000037780	-	95	81.081	Cercocebus_atys
ENSSSCG00000038364	-	100	80.000	ENSCLAG00000015446	-	100	80.000	Chinchilla_lanigera
ENSSSCG00000038364	-	96	79.195	ENSCSAG00000019043	-	96	79.195	Chlorocebus_sabaeus
ENSSSCG00000038364	-	100	80.519	ENSCSAG00000009837	-	100	80.519	Chlorocebus_sabaeus
ENSSSCG00000038364	-	97	67.333	ENSCPBG00000007389	-	97	67.333	Chrysemys_picta_bellii
ENSSSCG00000038364	-	73	33.913	ENSCING00000002791	-	73	32.836	Ciona_intestinalis
ENSSSCG00000038364	-	96	79.730	ENSCANG00000032318	-	100	79.730	Colobus_angolensis_palliatus
ENSSSCG00000038364	-	100	80.000	ENSCGRG00001000462	Mrpl23	100	80.000	Cricetulus_griseus_chok1gshd
ENSSSCG00000038364	-	100	80.000	ENSCGRG00000002207	Mrpl23	100	80.000	Cricetulus_griseus_crigri
ENSSSCG00000038364	-	97	62.838	ENSCSEG00000008738	mrpl23	100	62.838	Cynoglossus_semilaevis
ENSSSCG00000038364	-	97	61.745	ENSCVAG00000002822	mrpl23	97	61.745	Cyprinodon_variegatus
ENSSSCG00000038364	-	100	63.636	ENSDARG00000045696	mrpl23	100	63.636	Danio_rerio
ENSSSCG00000038364	-	99	60.265	ENSDNOG00000047306	-	99	60.265	Dasypus_novemcinctus
ENSSSCG00000038364	-	100	78.000	ENSDORG00000027504	Mrpl23	100	78.417	Dipodomys_ordii
ENSSSCG00000038364	-	96	42.759	FBgn0035335	mRpL23	97	42.759	Drosophila_melanogaster
ENSSSCG00000038364	-	97	82.000	ENSEASG00005000456	-	54	82.432	Equus_asinus_asinus
ENSSSCG00000038364	-	100	83.766	ENSECAG00000024486	-	53	83.766	Equus_caballus
ENSSSCG00000038364	-	100	61.438	ENSELUG00000022256	RM23	100	61.438	Esox_lucius
ENSSSCG00000038364	-	100	82.468	ENSFCAG00000018795	-	100	82.468	Felis_catus
ENSSSCG00000038364	-	95	67.808	ENSFALG00000011598	-	95	68.243	Ficedula_albicollis
ENSSSCG00000038364	-	100	82.000	ENSFDAG00000013606	-	100	82.000	Fukomys_damarensis
ENSSSCG00000038364	-	97	62.416	ENSFHEG00000010978	mrpl23	92	61.905	Fundulus_heteroclitus
ENSSSCG00000038364	-	95	60.000	ENSGMOG00000004509	mrpl23	100	60.000	Gadus_morhua
ENSSSCG00000038364	-	100	63.816	ENSGALG00000006561	-	71	63.816	Gallus_gallus
ENSSSCG00000038364	-	97	63.333	ENSGAFG00000021827	mrpl23	97	63.333	Gambusia_affinis
ENSSSCG00000038364	-	97	62.416	ENSGACG00000011130	mrpl23	97	62.416	Gasterosteus_aculeatus
ENSSSCG00000038364	-	97	66.667	ENSGAGG00000023827	-	97	66.667	Gopherus_agassizii
ENSSSCG00000038364	-	96	79.730	ENSGGOG00000000333	-	83	79.730	Gorilla_gorilla
ENSSSCG00000038364	-	97	64.189	ENSHBUG00000023397	mrpl23	97	63.758	Haplochromis_burtoni
ENSSSCG00000038364	-	100	80.667	ENSHGLG00000016722	-	100	80.667	Heterocephalus_glaber_female
ENSSSCG00000038364	-	100	80.667	ENSHGLG00100003075	-	100	80.667	Heterocephalus_glaber_male
ENSSSCG00000038364	-	97	63.758	ENSHCOG00000009092	mrpl23	97	63.758	Hippocampus_comes
ENSSSCG00000038364	-	100	62.092	ENSIPUG00000005383	mrpl23	100	62.092	Ictalurus_punctatus
ENSSSCG00000038364	-	100	79.470	ENSSTOG00000024573	-	100	79.470	Ictidomys_tridecemlineatus
ENSSSCG00000038364	-	100	82.667	ENSJJAG00000003519	Mrpl23	100	82.667	Jaculus_jaculus
ENSSSCG00000038364	-	99	58.553	ENSKMAG00000001599	mrpl23	99	58.553	Kryptolebias_marmoratus
ENSSSCG00000038364	-	97	62.416	ENSLBEG00000002580	mrpl23	97	62.416	Labrus_bergylta
ENSSSCG00000038364	-	100	63.636	ENSLACG00000011528	mrpl23	100	63.636	Latimeria_chalumnae
ENSSSCG00000038364	-	100	65.584	ENSLOCG00000001825	mrpl23	100	65.584	Lepisosteus_oculatus
ENSSSCG00000038364	-	85	72.115	ENSMFAG00000039715	-	100	72.381	Macaca_fascicularis
ENSSSCG00000038364	-	100	81.169	ENSMFAG00000034529	-	100	81.169	Macaca_fascicularis
ENSSSCG00000038364	-	100	80.519	ENSMMUG00000031268	MRPL23	100	80.519	Macaca_mulatta
ENSSSCG00000038364	-	100	80.392	ENSMNEG00000036690	-	100	80.392	Macaca_nemestrina
ENSSSCG00000038364	-	85	73.077	ENSMNEG00000033446	-	100	73.333	Macaca_nemestrina
ENSSSCG00000038364	-	96	80.405	ENSMLEG00000015767	-	100	80.405	Mandrillus_leucophaeus
ENSSSCG00000038364	-	97	63.758	ENSMAMG00000003609	mrpl23	97	63.758	Mastacembelus_armatus
ENSSSCG00000038364	-	97	64.865	ENSMZEG00005017456	mrpl23	97	64.430	Maylandia_zebra
ENSSSCG00000038364	-	99	64.901	ENSMGAG00000007978	-	100	64.901	Meleagris_gallopavo
ENSSSCG00000038364	-	96	78.767	ENSMAUG00000018693	Mrpl23	100	78.767	Mesocricetus_auratus
ENSSSCG00000038364	-	99	76.129	ENSMICG00000042091	-	99	76.129	Microcebus_murinus
ENSSSCG00000038364	-	100	80.667	ENSMOCG00000018436	Mrpl23	100	80.667	Microtus_ochrogaster
ENSSSCG00000038364	-	97	61.074	ENSMMOG00000018097	mrpl23	96	61.074	Mola_mola
ENSSSCG00000038364	-	100	76.623	ENSMODG00000003437	-	100	76.623	Monodelphis_domestica
ENSSSCG00000038364	-	97	64.430	ENSMALG00000014571	mrpl23	100	64.189	Monopterus_albus
ENSSSCG00000038364	-	100	79.605	MGP_CAROLIEiJ_G0030727	Mrpl23	100	79.605	Mus_caroli
ENSSSCG00000038364	-	100	78.947	ENSMUSG00000037772	Mrpl23	100	78.947	Mus_musculus
ENSSSCG00000038364	-	100	80.263	MGP_PahariEiJ_G0013923	Mrpl23	100	80.263	Mus_pahari
ENSSSCG00000038364	-	100	79.605	MGP_SPRETEiJ_G0031836	Mrpl23	100	79.605	Mus_spretus
ENSSSCG00000038364	-	96	82.000	ENSMPUG00000005658	-	96	82.000	Mustela_putorius_furo
ENSSSCG00000038364	-	100	73.377	ENSMPUG00000002923	-	99	73.377	Mustela_putorius_furo
ENSSSCG00000038364	-	83	80.800	ENSNGAG00000012877	-	91	80.800	Nannospalax_galili
ENSSSCG00000038364	-	100	78.667	ENSNGAG00000023444	-	100	78.667	Nannospalax_galili
ENSSSCG00000038364	-	97	64.430	ENSNBRG00000007183	mrpl23	97	64.430	Neolamprologus_brichardi
ENSSSCG00000038364	-	100	77.922	ENSNLEG00000026950	-	100	77.922	Nomascus_leucogenys
ENSSSCG00000038364	-	62	86.022	ENSOPRG00000018353	-	68	86.022	Ochotona_princeps
ENSSSCG00000038364	-	99	79.866	ENSODEG00000017262	-	99	79.866	Octodon_degus
ENSSSCG00000038364	-	99	72.000	ENSODEG00000012131	-	99	72.000	Octodon_degus
ENSSSCG00000038364	-	100	62.092	ENSONIG00000014500	mrpl23	96	62.092	Oreochromis_niloticus
ENSSSCG00000038364	-	98	61.333	ENSORLG00000025383	mrpl23	98	61.333	Oryzias_latipes
ENSSSCG00000038364	-	99	61.589	ENSORLG00020008379	mrpl23	98	61.589	Oryzias_latipes_hni
ENSSSCG00000038364	-	96	63.946	ENSOMEG00000019132	mrpl23	76	63.946	Oryzias_melastigma
ENSSSCG00000038364	-	100	79.870	ENSOGAG00000029988	-	100	79.870	Otolemur_garnettii
ENSSSCG00000038364	-	90	85.507	ENSOARG00000000706	-	86	85.507	Ovis_aries
ENSSSCG00000038364	-	100	79.870	ENSPPAG00000034414	-	100	79.870	Pan_paniscus
ENSSSCG00000038364	-	97	80.667	ENSPPRG00000013232	-	98	80.667	Panthera_pardus
ENSSSCG00000038364	-	100	79.870	ENSPTRG00000033746	MRPL23	100	79.870	Pan_troglodytes
ENSSSCG00000038364	-	100	81.169	ENSPANG00000018813	-	100	81.169	Papio_anubis
ENSSSCG00000038364	-	100	62.092	ENSPKIG00000001102	mrpl23	100	62.092	Paramormyrops_kingsleyae
ENSSSCG00000038364	-	92	56.522	ENSPSIG00000012834	-	100	62.500	Pelodiscus_sinensis
ENSSSCG00000038364	-	100	58.824	ENSPMGG00000006407	mrpl23	100	58.824	Periophthalmus_magnuspinnatus
ENSSSCG00000038364	-	100	78.667	ENSPEMG00000018572	Mrpl23	100	78.667	Peromyscus_maniculatus_bairdii
ENSSSCG00000038364	-	100	59.740	ENSPMAG00000005259	mrpl23	100	59.740	Petromyzon_marinus
ENSSSCG00000038364	-	66	87.879	ENSPCIG00000027047	-	62	87.879	Phascolarctos_cinereus
ENSSSCG00000038364	-	98	63.576	ENSPFOG00000014159	mrpl23	97	63.576	Poecilia_formosa
ENSSSCG00000038364	-	99	63.158	ENSPLAG00000023456	mrpl23	99	63.158	Poecilia_latipinna
ENSSSCG00000038364	-	97	64.667	ENSPMEG00000012252	mrpl23	97	64.667	Poecilia_mexicana
ENSSSCG00000038364	-	97	63.333	ENSPREG00000019951	mrpl23	96	63.333	Poecilia_reticulata
ENSSSCG00000038364	-	100	79.870	ENSPPYG00000002918	-	100	79.870	Pongo_abelii
ENSSSCG00000038364	-	96	76.351	ENSPCOG00000026555	-	100	76.351	Propithecus_coquereli
ENSSSCG00000038364	-	62	92.473	ENSPVAG00000000331	-	61	92.473	Pteropus_vampyrus
ENSSSCG00000038364	-	97	64.430	ENSPNYG00000015541	mrpl23	97	64.430	Pundamilia_nyererei
ENSSSCG00000038364	-	100	62.338	ENSPNAG00000010548	mrpl23	100	62.338	Pygocentrus_nattereri
ENSSSCG00000038364	-	100	80.263	ENSRNOG00000020354	Mrpl23	100	80.263	Rattus_norvegicus
ENSSSCG00000038364	-	100	80.519	ENSRBIG00000041638	-	100	80.519	Rhinopithecus_bieti
ENSSSCG00000038364	-	100	78.205	ENSRROG00000004661	-	100	80.405	Rhinopithecus_roxellana
ENSSSCG00000038364	-	96	80.822	ENSSBOG00000025338	-	81	80.822	Saimiri_boliviensis_boliviensis
ENSSSCG00000038364	-	96	74.150	ENSSHAG00000002716	-	100	74.150	Sarcophilus_harrisii
ENSSSCG00000038364	-	100	62.745	ENSSFOG00015002519	mrpl23	100	62.745	Scleropages_formosus
ENSSSCG00000038364	-	100	60.000	ENSSMAG00000009264	mrpl23	100	60.000	Scophthalmus_maximus
ENSSSCG00000038364	-	97	65.333	ENSSDUG00000019634	mrpl23	100	65.101	Seriola_dumerili
ENSSSCG00000038364	-	97	65.333	ENSSLDG00000012055	mrpl23	97	65.333	Seriola_lalandi_dorsalis
ENSSSCG00000038364	-	100	67.320	ENSSPUG00000002656	-	100	67.320	Sphenodon_punctatus
ENSSSCG00000038364	-	96	63.946	ENSSPAG00000001601	mrpl23	99	63.946	Stegastes_partitus
ENSSSCG00000038364	-	96	68.243	ENSTGUG00000009338	MRPL23	100	68.243	Taeniopygia_guttata
ENSSSCG00000038364	-	97	61.745	ENSTRUG00000009637	mrpl23	97	61.745	Takifugu_rubripes
ENSSSCG00000038364	-	62	66.667	ENSTNIG00000010463	mrpl23	100	66.667	Tetraodon_nigroviridis
ENSSSCG00000038364	-	62	93.548	ENSTTRG00000009281	-	56	93.548	Tursiops_truncatus
ENSSSCG00000038364	-	100	79.870	ENSUAMG00000020867	-	96	81.757	Ursus_americanus
ENSSSCG00000038364	-	100	79.870	ENSUMAG00000006227	-	85	79.870	Ursus_maritimus
ENSSSCG00000038364	-	100	82.353	ENSVVUG00000002581	-	78	82.353	Vulpes_vulpes
ENSSSCG00000038364	-	100	65.161	ENSXETG00000014017	mrpl23	100	63.399	Xenopus_tropicalis
ENSSSCG00000038364	-	96	54.362	ENSXCOG00000020628	mrpl23	97	54.362	Xiphophorus_couchianus
ENSSSCG00000038364	-	97	62.667	ENSXMAG00000015496	mrpl23	97	62.667	Xiphophorus_maculatus