EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000038385 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 225 bases
Position: chr8:132444611-132444835
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000035898	Ribosomal_L39	PF00832.20	9.3e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000055517	-	225	-	ENSSSCP00000035898	74 (aa)	-	A0A286ZW43

Gene Model

Click here to download ENSSSCG00000038385's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000038385's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000038385	-	69	92.157	ENSSSCG00000030849	-	100	92.157
ENSSSCG00000038385	-	69	92.157	ENSSSCG00000038467	-	100	92.157
ENSSSCG00000038385	-	68	78.000	ENSSSCG00000030928	-	100	78.000
ENSSSCG00000038385	-	69	82.353	ENSSSCG00000033224	-	100	82.353
ENSSSCG00000038385	-	69	50.980	ENSSSCG00000039696	-	100	50.980
ENSSSCG00000038385	-	69	92.157	ENSSSCG00000040703	-	100	92.157
ENSSSCG00000038385	-	69	82.692	ENSSSCG00000033110	-	100	82.692

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000038385	-	69	94.118	ENSAMEG00000019848	-	100	94.118	Ailuropoda_melanoleuca
ENSSSCG00000038385	-	69	92.157	ENSANAG00000016046	-	100	92.157	Aotus_nancymaae
ENSSSCG00000038385	-	69	86.275	ENSANAG00000016436	-	100	86.275	Aotus_nancymaae
ENSSSCG00000038385	-	69	94.118	ENSANAG00000031418	-	100	94.118	Aotus_nancymaae
ENSSSCG00000038385	-	69	92.157	ENSCAFG00020026664	-	100	92.157	Canis_lupus_dingo
ENSSSCG00000038385	-	69	92.157	ENSCAFG00020023883	-	100	92.157	Canis_lupus_dingo
ENSSSCG00000038385	-	69	90.196	ENSCAFG00020002578	-	100	90.196	Canis_lupus_dingo
ENSSSCG00000038385	-	69	92.157	ENSCAFG00020009904	-	100	92.157	Canis_lupus_dingo
ENSSSCG00000038385	-	69	86.275	ENSCAFG00020027515	-	100	86.275	Canis_lupus_dingo
ENSSSCG00000038385	-	69	90.196	ENSTSYG00000026785	-	100	90.196	Carlito_syrichta
ENSSSCG00000038385	-	62	89.130	ENSTSYG00000026787	-	82	89.130	Carlito_syrichta
ENSSSCG00000038385	-	69	94.118	ENSCAPG00000007210	-	100	94.118	Cavia_aperea
ENSSSCG00000038385	-	69	94.118	ENSCPOG00000036636	-	100	94.118	Cavia_porcellus
ENSSSCG00000038385	-	69	92.157	ENSCLAG00000017874	-	100	92.157	Chinchilla_lanigera
ENSSSCG00000038385	-	69	88.235	ENSCLAG00000017707	-	100	88.235	Chinchilla_lanigera
ENSSSCG00000038385	-	69	90.196	ENSCGRG00001012052	-	100	90.196	Cricetulus_griseus_chok1gshd
ENSSSCG00000038385	-	69	82.353	ENSCGRG00001008057	-	100	82.353	Cricetulus_griseus_chok1gshd
ENSSSCG00000038385	-	69	88.235	ENSCGRG00001003230	Rpl39l	100	88.235	Cricetulus_griseus_chok1gshd
ENSSSCG00000038385	-	69	90.196	ENSCGRG00000019654	-	100	90.196	Cricetulus_griseus_crigri
ENSSSCG00000038385	-	69	88.235	ENSCGRG00000018615	Rpl39l	100	88.235	Cricetulus_griseus_crigri
ENSSSCG00000038385	-	69	90.196	ENSDORG00000027732	-	100	90.196	Dipodomys_ordii
ENSSSCG00000038385	-	69	92.157	ENSDORG00000028485	-	100	92.157	Dipodomys_ordii
ENSSSCG00000038385	-	69	76.471	ENSFCAG00000044333	RPL39L	100	76.471	Felis_catus
ENSSSCG00000038385	-	73	66.667	ENSFCAG00000038709	-	95	66.667	Felis_catus
ENSSSCG00000038385	-	69	90.196	ENSFDAG00000021400	-	100	90.196	Fukomys_damarensis
ENSSSCG00000038385	-	69	86.275	ENSGGOG00000036596	-	100	86.275	Gorilla_gorilla
ENSSSCG00000038385	-	88	72.308	ENSGGOG00000040312	-	89	72.308	Gorilla_gorilla
ENSSSCG00000038385	-	69	90.196	ENSHGLG00000020604	-	100	90.196	Heterocephalus_glaber_female
ENSSSCG00000038385	-	69	90.196	ENSHGLG00100011216	-	100	90.196	Heterocephalus_glaber_male
ENSSSCG00000038385	-	69	92.157	ENSSTOG00000028051	-	100	92.157	Ictidomys_tridecemlineatus
ENSSSCG00000038385	-	69	94.118	ENSSTOG00000030492	-	100	94.118	Ictidomys_tridecemlineatus
ENSSSCG00000038385	-	69	86.275	ENSJJAG00000010041	-	100	86.275	Jaculus_jaculus
ENSSSCG00000038385	-	69	90.196	ENSLAFG00000028648	-	100	90.196	Loxodonta_africana
ENSSSCG00000038385	-	69	92.157	ENSMFAG00000020492	-	100	92.157	Macaca_fascicularis
ENSSSCG00000038385	-	69	88.235	ENSMMUG00000038479	-	100	88.235	Macaca_mulatta
ENSSSCG00000038385	-	69	94.118	ENSMMUG00000044527	-	100	94.118	Macaca_mulatta
ENSSSCG00000038385	-	69	92.157	ENSMMUG00000045452	-	100	92.157	Macaca_mulatta
ENSSSCG00000038385	-	69	92.157	ENSMNEG00000000126	-	100	92.157	Macaca_nemestrina
ENSSSCG00000038385	-	93	75.362	ENSMNEG00000001683	-	91	75.362	Macaca_nemestrina
ENSSSCG00000038385	-	69	92.157	ENSMLEG00000018088	-	100	92.157	Mandrillus_leucophaeus
ENSSSCG00000038385	-	68	92.000	ENSMLEG00000000739	-	100	92.000	Mandrillus_leucophaeus
ENSSSCG00000038385	-	69	88.235	ENSMLEG00000009433	-	100	88.235	Mandrillus_leucophaeus
ENSSSCG00000038385	-	69	94.118	ENSMLEG00000003517	-	100	94.118	Mandrillus_leucophaeus
ENSSSCG00000038385	-	69	88.235	ENSMAUG00000015776	Rpl39l	100	88.235	Mesocricetus_auratus
ENSSSCG00000038385	-	69	90.196	ENSMAUG00000002516	-	100	90.196	Mesocricetus_auratus
ENSSSCG00000038385	-	69	86.275	ENSMOCG00000001545	Rpl39l	100	86.275	Microtus_ochrogaster
ENSSSCG00000038385	-	69	94.118	ENSMOCG00000002138	-	100	94.118	Microtus_ochrogaster
ENSSSCG00000038385	-	69	90.196	MGP_CAROLIEiJ_G0020438	Rpl39l	100	90.196	Mus_caroli
ENSSSCG00000038385	-	69	90.196	ENSMUSG00000039209	Rpl39l	100	90.196	Mus_musculus
ENSSSCG00000038385	-	69	90.196	MGP_SPRETEiJ_G0021332	Rpl39l	100	90.196	Mus_spretus
ENSSSCG00000038385	-	69	86.275	ENSMLUG00000015029	-	100	86.275	Myotis_lucifugus
ENSSSCG00000038385	-	69	86.275	ENSMLUG00000025012	-	100	86.275	Myotis_lucifugus
ENSSSCG00000038385	-	69	84.314	ENSNGAG00000008665	-	100	84.314	Nannospalax_galili
ENSSSCG00000038385	-	69	88.235	ENSNGAG00000012570	Rpl39l	100	88.235	Nannospalax_galili
ENSSSCG00000038385	-	62	86.957	ENSNGAG00000022494	-	96	86.957	Nannospalax_galili
ENSSSCG00000038385	-	69	92.157	ENSODEG00000020114	-	100	92.157	Octodon_degus
ENSSSCG00000038385	-	69	90.196	ENSOGAG00000024799	-	100	90.196	Otolemur_garnettii
ENSSSCG00000038385	-	69	84.314	ENSPPRG00000020779	-	100	84.314	Panthera_pardus
ENSSSCG00000038385	-	69	86.275	ENSPTIG00000006209	-	100	86.275	Panthera_tigris_altaica
ENSSSCG00000038385	-	68	92.000	ENSPANG00000030226	-	100	92.000	Papio_anubis
ENSSSCG00000038385	-	69	90.196	ENSRNOG00000032300	Rpl39l	100	90.196	Rattus_norvegicus
ENSSSCG00000038385	-	69	92.157	ENSRBIG00000010842	-	100	92.157	Rhinopithecus_bieti
ENSSSCG00000038385	-	69	92.157	ENSRROG00000037724	-	100	92.157	Rhinopithecus_roxellana
ENSSSCG00000038385	-	69	92.157	ENSRROG00000023025	-	100	92.157	Rhinopithecus_roxellana
ENSSSCG00000038385	-	62	91.304	ENSUAMG00000000067	-	98	91.304	Ursus_americanus
ENSSSCG00000038385	-	69	94.118	ENSUAMG00000020990	-	100	94.118	Ursus_americanus
ENSSSCG00000038385	-	69	94.118	ENSUMAG00000015280	-	100	94.118	Ursus_maritimus
ENSSSCG00000038385	-	69	94.118	ENSVVUG00000030147	-	100	94.118	Vulpes_vulpes
ENSSSCG00000038385	-	69	84.314	ENSVVUG00000014095	-	100	84.314	Vulpes_vulpes
ENSSSCG00000038385	-	68	90.000	ENSVVUG00000022951	-	100	90.000	Vulpes_vulpes