EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000038472 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 805 bases
Position: chr8:54322856-54323660
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000043220	RRM_1	PF00076.22	1.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000057698	-	429	-	ENSSSCP00000043220	142 (aa)	-	A0A287AGQ7

Gene Model

Click here to download ENSSSCG00000038472's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000038472's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000038472	-	81	48.366	ENSSSCG00000034805	-	64	47.712
ENSSSCG00000038472	-	91	54.491	ENSSSCG00000002023	PABPN1	58	55.114

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000038472	-	91	54.491	ENSG00000100836	PABPN1	99	55.114	Homo_sapiens
ENSSSCG00000038472	-	91	54.491	ENSG00000258643	BCL2L2-PABPN1	53	55.114	Homo_sapiens
ENSSSCG00000038472	-	91	54.491	ENSAMEG00000007048	BCL2L2-PABPN1	93	55.114	Ailuropoda_melanoleuca
ENSSSCG00000038472	-	66	67.021	ENSACIG00000021744	pabpn1	57	66.990	Amphilophus_citrinellus
ENSSSCG00000038472	-	66	72.340	ENSACAG00000006185	-	63	53.107	Anolis_carolinensis
ENSSSCG00000038472	-	91	54.491	ENSANAG00000024513	-	63	55.114	Aotus_nancymaae
ENSSSCG00000038472	-	66	68.085	ENSAMXG00000000452	pabpn1	57	67.961	Astyanax_mexicanus
ENSSSCG00000038472	-	91	54.491	ENSBTAG00000053753	-	66	55.114	Bos_taurus
ENSSSCG00000038472	-	91	54.491	ENSBTAG00000006884	PABPN1	58	55.114	Bos_taurus
ENSSSCG00000038472	-	91	54.491	ENSCJAG00000007960	-	65	55.114	Callithrix_jacchus
ENSSSCG00000038472	-	91	52.695	ENSCJAG00000004407	-	88	53.409	Callithrix_jacchus
ENSSSCG00000038472	-	91	54.491	ENSCAFG00000011482	PABPN1	58	55.114	Canis_familiaris
ENSSSCG00000038472	-	91	54.491	ENSCAFG00020006651	-	58	55.114	Canis_lupus_dingo
ENSSSCG00000038472	-	91	54.491	ENSCAFG00020007298	-	58	55.114	Canis_lupus_dingo
ENSSSCG00000038472	-	91	54.491	ENSCHIG00000012184	PABPN1	58	55.114	Capra_hircus
ENSSSCG00000038472	-	91	54.491	ENSTSYG00000033996	BCL2L2-PABPN1	99	55.114	Carlito_syrichta
ENSSSCG00000038472	-	70	50.725	ENSCAPG00000009461	-	99	50.725	Cavia_aperea
ENSSSCG00000038472	-	91	53.892	ENSCPOG00000025574	PABPN1	58	54.545	Cavia_porcellus
ENSSSCG00000038472	-	91	54.491	ENSCCAG00000033954	BCL2L2-PABPN1	65	55.114	Cebus_capucinus
ENSSSCG00000038472	-	91	54.491	ENSCATG00000038536	BCL2L2-PABPN1	65	55.114	Cercocebus_atys
ENSSSCG00000038472	-	71	62.376	ENSCLAG00000012423	PABPN1	68	46.961	Chinchilla_lanigera
ENSSSCG00000038472	-	91	53.293	ENSCSAG00000016036	PABPN1	58	53.977	Chlorocebus_sabaeus
ENSSSCG00000038472	-	91	47.904	ENSCHOG00000004798	BCL2L2-PABPN1	76	48.864	Choloepus_hoffmanni
ENSSSCG00000038472	-	91	52.096	ENSCPBG00000026060	-	99	52.841	Chrysemys_picta_bellii
ENSSSCG00000038472	-	71	57.426	ENSCSAVG00000002001	-	60	57.426	Ciona_savignyi
ENSSSCG00000038472	-	91	47.904	ENSCANG00000030980	-	62	47.159	Colobus_angolensis_palliatus
ENSSSCG00000038472	-	91	54.491	ENSCANG00000009750	BCL2L2-PABPN1	99	55.114	Colobus_angolensis_palliatus
ENSSSCG00000038472	-	91	53.892	ENSCGRG00001019696	Pabpn1	99	54.545	Cricetulus_griseus_chok1gshd
ENSSSCG00000038472	-	91	53.892	ENSCGRG00000011102	Pabpn1	99	54.545	Cricetulus_griseus_crigri
ENSSSCG00000038472	-	66	67.021	ENSCVAG00000003152	pabpn1	75	46.893	Cyprinodon_variegatus
ENSSSCG00000038472	-	68	45.361	ENSDARG00000087996	pabpn1l	59	45.361	Danio_rerio
ENSSSCG00000038472	-	91	54.491	ENSDNOG00000023682	PABPN1	58	55.114	Dasypus_novemcinctus
ENSSSCG00000038472	-	91	53.293	ENSDORG00000028966	-	58	53.977	Dipodomys_ordii
ENSSSCG00000038472	-	72	70.588	ENSDORG00000023928	-	71	70.588	Dipodomys_ordii
ENSSSCG00000038472	-	97	44.633	ENSEBUG00000002322	pabpn1	76	44.633	Eptatretus_burgeri
ENSSSCG00000038472	-	91	54.491	ENSEASG00005011716	PABPN1	58	55.114	Equus_asinus_asinus
ENSSSCG00000038472	-	87	53.704	ENSECAG00000011652	PABPN1	55	54.878	Equus_caballus
ENSSSCG00000038472	-	91	51.497	ENSEEUG00000012973	-	60	52.273	Erinaceus_europaeus
ENSSSCG00000038472	-	91	54.491	ENSFCAG00000031922	PABPN1	58	55.114	Felis_catus
ENSSSCG00000038472	-	91	53.892	ENSFDAG00000018381	BCL2L2-PABPN1	99	54.545	Fukomys_damarensis
ENSSSCG00000038472	-	66	72.340	ENSGALG00000052930	-	51	51.705	Gallus_gallus
ENSSSCG00000038472	-	91	54.491	ENSGGOG00000022683	-	65	55.114	Gorilla_gorilla
ENSSSCG00000038472	-	91	49.686	ENSGGOG00000025919	-	98	50.595	Gorilla_gorilla
ENSSSCG00000038472	-	89	55.844	ENSGGOG00000039675	-	64	55.758	Gorilla_gorilla
ENSSSCG00000038472	-	90	52.055	ENSHGLG00000018588	-	58	52.903	Heterocephalus_glaber_female
ENSSSCG00000038472	-	91	53.892	ENSHGLG00000002927	-	65	73.786	Heterocephalus_glaber_female
ENSSSCG00000038472	-	91	58.219	ENSHGLG00000009842	-	99	58.710	Heterocephalus_glaber_female
ENSSSCG00000038472	-	91	53.892	ENSHGLG00100006673	-	99	54.545	Heterocephalus_glaber_male
ENSSSCG00000038472	-	90	52.055	ENSHGLG00100015565	-	59	52.903	Heterocephalus_glaber_male
ENSSSCG00000038472	-	91	46.199	ENSHGLG00100018935	-	99	48.889	Heterocephalus_glaber_male
ENSSSCG00000038472	-	91	54.491	ENSSTOG00000029847	BCL2L2-PABPN1	99	55.114	Ictidomys_tridecemlineatus
ENSSSCG00000038472	-	91	54.491	ENSJJAG00000023507	Gm20521	99	55.114	Jaculus_jaculus
ENSSSCG00000038472	-	71	55.446	ENSLOCG00000004694	pabpn1l	80	40.936	Lepisosteus_oculatus
ENSSSCG00000038472	-	79	52.000	ENSLAFG00000031227	-	99	52.000	Loxodonta_africana
ENSSSCG00000038472	-	91	54.491	ENSMFAG00000032183	BCL2L2-PABPN1	99	55.114	Macaca_fascicularis
ENSSSCG00000038472	-	73	48.936	ENSMFAG00000031355	-	99	48.936	Macaca_fascicularis
ENSSSCG00000038472	-	91	54.491	ENSMMUG00000014747	BCL2L2-PABPN1	100	51.370	Macaca_mulatta
ENSSSCG00000038472	-	92	47.619	ENSMNEG00000035750	-	99	48.936	Macaca_nemestrina
ENSSSCG00000038472	-	91	54.491	ENSMNEG00000045065	BCL2L2-PABPN1	65	55.114	Macaca_nemestrina
ENSSSCG00000038472	-	91	54.491	ENSMLEG00000043862	BCL2L2-PABPN1	99	55.114	Mandrillus_leucophaeus
ENSSSCG00000038472	-	92	48.780	ENSMLEG00000034623	-	99	51.095	Mandrillus_leucophaeus
ENSSSCG00000038472	-	91	53.892	ENSMAUG00000007383	Gm20521	59	54.545	Mesocricetus_auratus
ENSSSCG00000038472	-	91	54.491	ENSMICG00000010002	BCL2L2-PABPN1	65	55.114	Microcebus_murinus
ENSSSCG00000038472	-	91	54.491	ENSMOCG00000018557	Gm20521	63	73.786	Microtus_ochrogaster
ENSSSCG00000038472	-	89	50.610	ENSMODG00000004535	-	56	53.216	Monodelphis_domestica
ENSSSCG00000038472	-	91	53.892	MGP_CAROLIEiJ_G0019276	Gm20521	53	54.545	Mus_caroli
ENSSSCG00000038472	-	91	53.892	MGP_CAROLIEiJ_G0019277	Pabpn1	99	54.545	Mus_caroli
ENSSSCG00000038472	-	91	54.491	ENSMUSG00000092232	Gm20521	53	55.114	Mus_musculus
ENSSSCG00000038472	-	91	54.491	ENSMUSG00000022194	Pabpn1	99	55.114	Mus_musculus
ENSSSCG00000038472	-	91	54.491	MGP_PahariEiJ_G0030295	Pabpn1	100	66.667	Mus_pahari
ENSSSCG00000038472	-	91	54.491	MGP_PahariEiJ_G0030294	Gm20521	53	55.114	Mus_pahari
ENSSSCG00000038472	-	91	54.491	MGP_SPRETEiJ_G0020165	Gm20521	53	55.114	Mus_spretus
ENSSSCG00000038472	-	91	54.491	MGP_SPRETEiJ_G0020166	Pabpn1	99	55.114	Mus_spretus
ENSSSCG00000038472	-	82	54.194	ENSMPUG00000006775	-	98	54.878	Mustela_putorius_furo
ENSSSCG00000038472	-	91	53.293	ENSMLUG00000028677	-	65	53.977	Myotis_lucifugus
ENSSSCG00000038472	-	97	54.545	ENSMLUG00000003800	-	93	54.545	Myotis_lucifugus
ENSSSCG00000038472	-	66	74.468	ENSMLUG00000012452	-	58	53.933	Myotis_lucifugus
ENSSSCG00000038472	-	91	54.491	ENSNGAG00000019529	Gm20521	53	55.114	Nannospalax_galili
ENSSSCG00000038472	-	66	67.021	ENSNBRG00000023955	pabpn1	57	66.990	Neolamprologus_brichardi
ENSSSCG00000038472	-	87	54.861	ENSNLEG00000030598	-	66	52.174	Nomascus_leucogenys
ENSSSCG00000038472	-	91	54.491	ENSNLEG00000015007	-	63	55.114	Nomascus_leucogenys
ENSSSCG00000038472	-	78	44.697	ENSNLEG00000035292	-	100	44.697	Nomascus_leucogenys
ENSSSCG00000038472	-	89	52.667	ENSODEG00000003739	-	58	52.469	Octodon_degus
ENSSSCG00000038472	-	91	53.892	ENSODEG00000002083	BCL2L2-PABPN1	58	54.545	Octodon_degus
ENSSSCG00000038472	-	97	50.568	ENSODEG00000011555	-	94	50.568	Octodon_degus
ENSSSCG00000038472	-	76	50.000	ENSOANG00000009218	-	100	50.000	Ornithorhynchus_anatinus
ENSSSCG00000038472	-	91	54.491	ENSOCUG00000016174	PABPN1	64	55.114	Oryctolagus_cuniculus
ENSSSCG00000038472	-	91	54.491	ENSOGAG00000008710	PABPN1	58	55.114	Otolemur_garnettii
ENSSSCG00000038472	-	91	54.491	ENSPPAG00000028984	BCL2L2-PABPN1	98	54.878	Pan_paniscus
ENSSSCG00000038472	-	91	55.128	ENSPPAG00000039421	-	99	55.758	Pan_paniscus
ENSSSCG00000038472	-	91	54.491	ENSPPRG00000010567	PABPN1	58	55.114	Panthera_pardus
ENSSSCG00000038472	-	91	54.491	ENSPTIG00000001063	BCL2L2-PABPN1	99	55.114	Panthera_tigris_altaica
ENSSSCG00000038472	-	91	52.564	ENSPTRG00000047273	-	64	53.333	Pan_troglodytes
ENSSSCG00000038472	-	91	54.491	ENSPTRG00000006167	BCL2L2	65	55.114	Pan_troglodytes
ENSSSCG00000038472	-	91	54.491	ENSPANG00000021100	BCL2L2-PABPN1	65	55.114	Papio_anubis
ENSSSCG00000038472	-	92	47.619	ENSPANG00000023326	-	100	47.619	Papio_anubis
ENSSSCG00000038472	-	75	53.271	ENSPKIG00000008340	pabpn1l	52	53.271	Paramormyrops_kingsleyae
ENSSSCG00000038472	-	55	64.103	ENSPSIG00000011959	-	55	64.103	Pelodiscus_sinensis
ENSSSCG00000038472	-	91	53.892	ENSPEMG00000008332	Gm20521	62	73.786	Peromyscus_maniculatus_bairdii
ENSSSCG00000038472	-	91	52.096	ENSPCIG00000027751	-	58	53.977	Phascolarctos_cinereus
ENSSSCG00000038472	-	82	54.194	ENSPPYG00000005663	PABPN1	58	54.878	Pongo_abelii
ENSSSCG00000038472	-	82	40.385	ENSPCAG00000005902	PABPN1	56	41.818	Procavia_capensis
ENSSSCG00000038472	-	91	54.491	ENSPCOG00000028047	BCL2L2-PABPN1	65	55.114	Propithecus_coquereli
ENSSSCG00000038472	-	91	53.293	ENSPVAG00000005270	PABPN1	58	53.977	Pteropus_vampyrus
ENSSSCG00000038472	-	75	54.630	ENSPNAG00000021666	pabpn1l	52	54.630	Pygocentrus_nattereri
ENSSSCG00000038472	-	91	54.491	ENSRNOG00000042195	Pabpn1	58	55.114	Rattus_norvegicus
ENSSSCG00000038472	-	82	54.194	ENSRBIG00000040762	BCL2L2-PABPN1	51	54.878	Rhinopithecus_bieti
ENSSSCG00000038472	-	85	46.358	ENSRBIG00000042811	-	72	47.024	Rhinopithecus_bieti
ENSSSCG00000038472	-	91	47.904	ENSRBIG00000039547	-	63	47.159	Rhinopithecus_bieti
ENSSSCG00000038472	-	85	51.079	ENSRROG00000036409	-	53	51.282	Rhinopithecus_roxellana
ENSSSCG00000038472	-	91	54.491	ENSRROG00000045535	BCL2L2-PABPN1	99	55.114	Rhinopithecus_roxellana
ENSSSCG00000038472	-	91	48.503	ENSRROG00000040409	-	63	47.727	Rhinopithecus_roxellana
ENSSSCG00000038472	-	91	50.556	ENSSBOG00000026930	BCL2L2-PABPN1	98	54.878	Saimiri_boliviensis_boliviensis
ENSSSCG00000038472	-	91	52.096	ENSSHAG00000014841	-	81	53.977	Sarcophilus_harrisii
ENSSSCG00000038472	-	97	43.182	ENSSHAG00000007707	-	75	43.182	Sarcophilus_harrisii
ENSSSCG00000038472	-	91	52.096	ENSSPUG00000018308	-	99	52.841	Sphenodon_punctatus
ENSSSCG00000038472	-	66	67.021	ENSSPAG00000021658	pabpn1	75	46.328	Stegastes_partitus
ENSSSCG00000038472	-	91	54.491	ENSUAMG00000024460	PABPN1	58	55.114	Ursus_americanus
ENSSSCG00000038472	-	91	54.491	ENSUMAG00000014288	BCL2L2-PABPN1	53	55.114	Ursus_maritimus
ENSSSCG00000038472	-	91	54.491	ENSVVUG00000019912	BCL2L2-PABPN1	69	55.114	Vulpes_vulpes
ENSSSCG00000038472	-	91	49.398	ENSXETG00000014597	pabpn1	59	52.000	Xenopus_tropicalis