EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000038534 (Gene tree)
Gene ID: 110256073
Gene Symbol: TSR1
Alias: FLJ10534
Full Name: TSR1%2C ribosome maturation factor
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 12410 bases
Position: chr12:48404292-48416701
Accession: 110256073
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000052694	AARP2CN	PF08142.12	6.8e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000058795	TSR1-201	4011	XM_021067603	ENSSSCP00000052694	804 (aa)	XP_020923262	A0A287B893

Gene Model

Click here to download ENSSSCG00000038534's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000038534's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000038534	TSR1	100	89.826	ENSG00000167721	TSR1	100	89.950	Homo_sapiens
ENSSSCG00000038534	TSR1	99	55.238	ENSAPOG00000020891	tsr1	99	55.635	Acanthochromis_polyacanthus
ENSSSCG00000038534	TSR1	100	90.663	ENSAMEG00000007599	TSR1	99	90.663	Ailuropoda_melanoleuca
ENSSSCG00000038534	TSR1	99	57.178	ENSACIG00000007090	tsr1	99	57.196	Amphilophus_citrinellus
ENSSSCG00000038534	TSR1	99	54.827	ENSAOCG00000023284	tsr1	99	55.865	Amphiprion_ocellaris
ENSSSCG00000038534	TSR1	94	55.626	ENSAPEG00000008452	tsr1	100	56.739	Amphiprion_percula
ENSSSCG00000038534	TSR1	99	55.981	ENSATEG00000021961	tsr1	99	56.459	Anabas_testudineus
ENSSSCG00000038534	TSR1	92	68.775	ENSAPLG00000013422	TSR1	99	68.775	Anas_platyrhynchos
ENSSSCG00000038534	TSR1	71	59.036	ENSACAG00000000859	TSR1	92	58.692	Anolis_carolinensis
ENSSSCG00000038534	TSR1	100	90.547	ENSANAG00000031071	TSR1	100	90.423	Aotus_nancymaae
ENSSSCG00000038534	TSR1	99	56.062	ENSACLG00000007595	tsr1	99	56.679	Astatotilapia_calliptera
ENSSSCG00000038534	TSR1	50	49.758	ENSAMXG00000008470	tsr1	92	48.864	Astyanax_mexicanus
ENSSSCG00000038534	TSR1	100	94.279	ENSBTAG00000004225	TSR1	100	94.279	Bos_taurus
ENSSSCG00000038534	TSR1	97	38.945	WBGene00006497	tag-151	96	40.050	Caenorhabditis_elegans
ENSSSCG00000038534	TSR1	100	90.050	ENSCJAG00000012456	TSR1	100	89.925	Callithrix_jacchus
ENSSSCG00000038534	TSR1	90	90.771	ENSCAFG00000019273	-	100	90.868	Canis_familiaris
ENSSSCG00000038534	TSR1	100	91.056	ENSCAFG00000002106	-	100	91.056	Canis_familiaris
ENSSSCG00000038534	TSR1	100	90.559	ENSCAFG00020009728	TSR1	100	90.559	Canis_lupus_dingo
ENSSSCG00000038534	TSR1	100	94.403	ENSCHIG00000023935	TSR1	100	94.403	Capra_hircus
ENSSSCG00000038534	TSR1	100	90.174	ENSTSYG00000005468	TSR1	100	90.174	Carlito_syrichta
ENSSSCG00000038534	TSR1	93	89.008	ENSCPOG00000014833	TSR1	99	89.008	Cavia_porcellus
ENSSSCG00000038534	TSR1	93	91.287	ENSCCAG00000028962	TSR1	98	91.153	Cebus_capucinus
ENSSSCG00000038534	TSR1	100	90.571	ENSCATG00000044262	TSR1	100	90.447	Cercocebus_atys
ENSSSCG00000038534	TSR1	100	89.428	ENSCLAG00000005567	TSR1	100	89.428	Chinchilla_lanigera
ENSSSCG00000038534	TSR1	100	90.571	ENSCSAG00000013788	TSR1	100	90.447	Chlorocebus_sabaeus
ENSSSCG00000038534	TSR1	99	69.288	ENSCPBG00000020363	TSR1	97	70.173	Chrysemys_picta_bellii
ENSSSCG00000038534	TSR1	97	47.051	ENSCING00000020658	-	99	46.482	Ciona_intestinalis
ENSSSCG00000038534	TSR1	97	45.397	ENSCSAVG00000001875	-	99	45.649	Ciona_savignyi
ENSSSCG00000038534	TSR1	100	82.836	ENSCANG00000033056	TSR1	100	92.484	Colobus_angolensis_palliatus
ENSSSCG00000038534	TSR1	100	86.211	ENSCGRG00001023942	Tsr1	100	87.205	Cricetulus_griseus_chok1gshd
ENSSSCG00000038534	TSR1	100	80.970	ENSCGRG00000013015	Tsr1	100	81.965	Cricetulus_griseus_crigri
ENSSSCG00000038534	TSR1	99	55.836	ENSCSEG00000013009	tsr1	99	56.386	Cynoglossus_semilaevis
ENSSSCG00000038534	TSR1	99	56.432	ENSCVAG00000000506	tsr1	99	56.675	Cyprinodon_variegatus
ENSSSCG00000038534	TSR1	99	54.994	ENSDARG00000007744	tsr1	99	55.692	Danio_rerio
ENSSSCG00000038534	TSR1	100	89.925	ENSDNOG00000004715	TSR1	100	90.423	Dasypus_novemcinctus
ENSSSCG00000038534	TSR1	100	87.562	ENSDORG00000016371	-	100	87.562	Dipodomys_ordii
ENSSSCG00000038534	TSR1	97	76.350	ENSDORG00000023234	-	100	75.964	Dipodomys_ordii
ENSSSCG00000038534	TSR1	97	43.564	FBgn0037073	Tsr1	96	44.238	Drosophila_melanogaster
ENSSSCG00000038534	TSR1	92	90.492	ENSETEG00000017534	TSR1	92	90.492	Echinops_telfairi
ENSSSCG00000038534	TSR1	96	54.005	ENSEBUG00000013731	TSR1	98	53.747	Eptatretus_burgeri
ENSSSCG00000038534	TSR1	100	93.657	ENSEASG00005009302	TSR1	97	93.657	Equus_asinus_asinus
ENSSSCG00000038534	TSR1	100	93.408	ENSECAG00000009114	TSR1	100	93.408	Equus_caballus
ENSSSCG00000038534	TSR1	99	55.276	ENSELUG00000020984	tsr1	95	54.994	Esox_lucius
ENSSSCG00000038534	TSR1	100	91.915	ENSFCAG00000006313	TSR1	100	91.915	Felis_catus
ENSSSCG00000038534	TSR1	99	69.667	ENSFALG00000006532	TSR1	99	70.037	Ficedula_albicollis
ENSSSCG00000038534	TSR1	100	89.303	ENSFDAG00000006038	TSR1	100	89.303	Fukomys_damarensis
ENSSSCG00000038534	TSR1	99	55.396	ENSFHEG00000003626	tsr1	99	55.529	Fundulus_heteroclitus
ENSSSCG00000038534	TSR1	99	53.309	ENSGMOG00000010336	tsr1	99	53.856	Gadus_morhua
ENSSSCG00000038534	TSR1	99	55.127	ENSGAFG00000012993	tsr1	99	55.623	Gambusia_affinis
ENSSSCG00000038534	TSR1	99	55.257	ENSGACG00000010843	tsr1	99	55.746	Gasterosteus_aculeatus
ENSSSCG00000038534	TSR1	99	70.301	ENSGAGG00000025619	-	99	70.596	Gopherus_agassizii
ENSSSCG00000038534	TSR1	100	89.826	ENSGGOG00000001704	TSR1	100	90.199	Gorilla_gorilla
ENSSSCG00000038534	TSR1	99	55.981	ENSHBUG00000017904	tsr1	100	57.325	Haplochromis_burtoni
ENSSSCG00000038534	TSR1	100	90.423	ENSHGLG00000012806	-	100	90.423	Heterocephalus_glaber_female
ENSSSCG00000038534	TSR1	97	80.206	ENSHGLG00000015688	-	99	79.692	Heterocephalus_glaber_female
ENSSSCG00000038534	TSR1	100	90.423	ENSHGLG00100015392	TSR1	100	90.423	Heterocephalus_glaber_male
ENSSSCG00000038534	TSR1	99	56.597	ENSHCOG00000001432	tsr1	99	56.559	Hippocampus_comes
ENSSSCG00000038534	TSR1	99	55.663	ENSIPUG00000004618	tsr1	99	56.558	Ictalurus_punctatus
ENSSSCG00000038534	TSR1	100	88.462	ENSSTOG00000011819	TSR1	100	89.082	Ictidomys_tridecemlineatus
ENSSSCG00000038534	TSR1	92	81.707	ENSJJAG00000019505	Tsr1	95	81.707	Jaculus_jaculus
ENSSSCG00000038534	TSR1	99	55.036	ENSKMAG00000005763	tsr1	99	55.609	Kryptolebias_marmoratus
ENSSSCG00000038534	TSR1	99	55.276	ENSLBEG00000021823	tsr1	99	55.995	Labrus_bergylta
ENSSSCG00000038534	TSR1	99	63.736	ENSLACG00000002197	TSR1	99	64.251	Latimeria_chalumnae
ENSSSCG00000038534	TSR1	82	59.016	ENSLOCG00000006491	TSR1	88	59.314	Lepisosteus_oculatus
ENSSSCG00000038534	TSR1	100	90.819	ENSMFAG00000021330	TSR1	100	90.695	Macaca_fascicularis
ENSSSCG00000038534	TSR1	100	90.447	ENSMMUG00000017519	TSR1	100	90.323	Macaca_mulatta
ENSSSCG00000038534	TSR1	100	90.447	ENSMNEG00000031382	TSR1	100	90.323	Macaca_nemestrina
ENSSSCG00000038534	TSR1	100	90.447	ENSMLEG00000036733	TSR1	100	90.323	Mandrillus_leucophaeus
ENSSSCG00000038534	TSR1	99	55.131	ENSMAMG00000017918	tsr1	99	56.287	Mastacembelus_armatus
ENSSSCG00000038534	TSR1	99	56.235	ENSMZEG00005007477	tsr1	99	56.851	Maylandia_zebra
ENSSSCG00000038534	TSR1	99	68.148	ENSMGAG00000005576	TSR1	99	68.681	Meleagris_gallopavo
ENSSSCG00000038534	TSR1	100	92.164	ENSMICG00000012943	TSR1	100	92.164	Microcebus_murinus
ENSSSCG00000038534	TSR1	100	86.584	ENSMOCG00000022764	Tsr1	100	87.205	Microtus_ochrogaster
ENSSSCG00000038534	TSR1	99	55.690	ENSMMOG00000014280	tsr1	99	56.258	Mola_mola
ENSSSCG00000038534	TSR1	100	79.379	ENSMODG00000010658	TSR1	100	79.006	Monodelphis_domestica
ENSSSCG00000038534	TSR1	99	55.942	ENSMALG00000011681	tsr1	99	57.590	Monopterus_albus
ENSSSCG00000038534	TSR1	100	87.313	MGP_CAROLIEiJ_G0016727	Tsr1	100	87.313	Mus_caroli
ENSSSCG00000038534	TSR1	100	87.687	ENSMUSG00000038335	Tsr1	100	87.687	Mus_musculus
ENSSSCG00000038534	TSR1	100	87.687	MGP_PahariEiJ_G0017864	Tsr1	100	87.687	Mus_pahari
ENSSSCG00000038534	TSR1	100	87.687	MGP_SPRETEiJ_G0017570	Tsr1	100	87.687	Mus_spretus
ENSSSCG00000038534	TSR1	82	91.006	ENSMPUG00000013000	TSR1	100	91.006	Mustela_putorius_furo
ENSSSCG00000038534	TSR1	100	93.657	ENSMLUG00000003505	TSR1	100	93.657	Myotis_lucifugus
ENSSSCG00000038534	TSR1	99	55.914	ENSNBRG00000020728	tsr1	99	56.595	Neolamprologus_brichardi
ENSSSCG00000038534	TSR1	100	81.592	ENSNLEG00000017184	TSR1	100	84.080	Nomascus_leucogenys
ENSSSCG00000038534	TSR1	100	73.201	ENSMEUG00000015828	TSR1	100	73.267	Notamacropus_eugenii
ENSSSCG00000038534	TSR1	99	56.235	ENSONIG00000013131	tsr1	99	56.901	Oreochromis_niloticus
ENSSSCG00000038534	TSR1	96	73.779	ENSOANG00000008637	TSR1	100	73.393	Ornithorhynchus_anatinus
ENSSSCG00000038534	TSR1	100	90.672	ENSOCUG00000014256	TSR1	100	90.672	Oryctolagus_cuniculus
ENSSSCG00000038534	TSR1	99	55.222	ENSORLG00000004926	tsr1	98	56.197	Oryzias_latipes
ENSSSCG00000038534	TSR1	99	55.288	ENSORLG00020008792	tsr1	98	56.265	Oryzias_latipes_hni
ENSSSCG00000038534	TSR1	99	55.102	ENSORLG00015013838	tsr1	98	56.077	Oryzias_latipes_hsok
ENSSSCG00000038534	TSR1	99	55.449	ENSOMEG00000004830	tsr1	98	55.596	Oryzias_melastigma
ENSSSCG00000038534	TSR1	100	89.149	ENSOGAG00000004492	TSR1	100	89.026	Otolemur_garnettii
ENSSSCG00000038534	TSR1	100	94.403	ENSOARG00000015437	TSR1	97	94.403	Ovis_aries
ENSSSCG00000038534	TSR1	100	89.950	ENSPPAG00000036355	TSR1	100	90.074	Pan_paniscus
ENSSSCG00000038534	TSR1	100	91.667	ENSPPRG00000015519	-	100	91.667	Panthera_pardus
ENSSSCG00000038534	TSR1	100	91.915	ENSPTIG00000010608	TSR1	100	91.915	Panthera_tigris_altaica
ENSSSCG00000038534	TSR1	100	89.950	ENSPTRG00000008547	TSR1	100	90.074	Pan_troglodytes
ENSSSCG00000038534	TSR1	100	87.221	ENSPANG00000024463	TSR1	100	87.097	Papio_anubis
ENSSSCG00000038534	TSR1	99	55.762	ENSPKIG00000013972	tsr1	99	55.366	Paramormyrops_kingsleyae
ENSSSCG00000038534	TSR1	88	68.644	ENSPSIG00000018258	TSR1	100	69.111	Pelodiscus_sinensis
ENSSSCG00000038534	TSR1	99	57.494	ENSPMGG00000011577	tsr1	99	57.617	Periophthalmus_magnuspinnatus
ENSSSCG00000038534	TSR1	100	85.945	ENSPEMG00000018033	Tsr1	100	85.821	Peromyscus_maniculatus_bairdii
ENSSSCG00000038534	TSR1	100	79.032	ENSPCIG00000009357	TSR1	98	79.728	Phascolarctos_cinereus
ENSSSCG00000038534	TSR1	99	55.596	ENSPFOG00000004483	TSR1	99	57.056	Poecilia_formosa
ENSSSCG00000038534	TSR1	99	55.168	ENSPLAG00000022320	tsr1	99	55.651	Poecilia_latipinna
ENSSSCG00000038534	TSR1	99	55.048	ENSPMEG00000004577	tsr1	99	55.889	Poecilia_mexicana
ENSSSCG00000038534	TSR1	97	55.569	ENSPREG00000010354	tsr1	95	55.748	Poecilia_reticulata
ENSSSCG00000038534	TSR1	100	82.716	ENSPPYG00000007792	TSR1	100	82.593	Pongo_abelii
ENSSSCG00000038534	TSR1	52	90.765	ENSPCAG00000012973	-	72	90.765	Procavia_capensis
ENSSSCG00000038534	TSR1	100	92.040	ENSPCOG00000017928	TSR1	100	92.040	Propithecus_coquereli
ENSSSCG00000038534	TSR1	100	92.289	ENSPVAG00000002162	TSR1	100	92.164	Pteropus_vampyrus
ENSSSCG00000038534	TSR1	99	56.182	ENSPNYG00000016163	tsr1	99	56.799	Pundamilia_nyererei
ENSSSCG00000038534	TSR1	99	54.491	ENSPNAG00000008659	tsr1	99	54.731	Pygocentrus_nattereri
ENSSSCG00000038534	TSR1	100	86.708	ENSRNOG00000002980	Tsr1	100	86.211	Rattus_norvegicus
ENSSSCG00000038534	TSR1	100	90.695	ENSRBIG00000040016	TSR1	100	90.571	Rhinopithecus_bieti
ENSSSCG00000038534	TSR1	100	90.571	ENSRROG00000030361	TSR1	100	90.447	Rhinopithecus_roxellana
ENSSSCG00000038534	TSR1	100	91.045	ENSSBOG00000020785	TSR1	100	90.920	Saimiri_boliviensis_boliviensis
ENSSSCG00000038534	TSR1	100	77.599	ENSSHAG00000011394	TSR1	100	77.323	Sarcophilus_harrisii
ENSSSCG00000038534	TSR1	99	57.335	ENSSFOG00015005455	tsr1	99	57.650	Scleropages_formosus
ENSSSCG00000038534	TSR1	99	54.923	ENSSMAG00000009504	tsr1	99	55.649	Scophthalmus_maximus
ENSSSCG00000038534	TSR1	99	56.783	ENSSDUG00000012074	tsr1	99	56.220	Seriola_dumerili
ENSSSCG00000038534	TSR1	99	56.475	ENSSLDG00000002031	tsr1	99	55.596	Seriola_lalandi_dorsalis
ENSSSCG00000038534	TSR1	100	77.488	ENSSARG00000000759	TSR1	100	77.488	Sorex_araneus
ENSSSCG00000038534	TSR1	99	68.512	ENSSPUG00000007042	TSR1	99	68.143	Sphenodon_punctatus
ENSSSCG00000038534	TSR1	99	55.423	ENSSPAG00000021951	tsr1	99	56.235	Stegastes_partitus
ENSSSCG00000038534	TSR1	90	71.020	ENSTGUG00000005883	TSR1	100	71.721	Taeniopygia_guttata
ENSSSCG00000038534	TSR1	99	56.574	ENSTRUG00000004665	tsr1	99	57.177	Takifugu_rubripes
ENSSSCG00000038534	TSR1	99	57.565	ENSTNIG00000016196	tsr1	99	57.509	Tetraodon_nigroviridis
ENSSSCG00000038534	TSR1	67	93.878	ENSTBEG00000015275	-	67	93.878	Tupaia_belangeri
ENSSSCG00000038534	TSR1	100	94.403	ENSTTRG00000001177	TSR1	100	94.403	Tursiops_truncatus
ENSSSCG00000038534	TSR1	100	90.672	ENSUAMG00000025160	TSR1	99	91.840	Ursus_americanus
ENSSSCG00000038534	TSR1	97	90.409	ENSUMAG00000009294	TSR1	99	90.409	Ursus_maritimus
ENSSSCG00000038534	TSR1	84	91.085	ENSVPAG00000000228	TSR1	100	90.045	Vicugna_pacos
ENSSSCG00000038534	TSR1	100	90.559	ENSVVUG00000021767	TSR1	100	90.559	Vulpes_vulpes
ENSSSCG00000038534	TSR1	99	60.539	ENSXETG00000023797	tsr1	100	61.722	Xenopus_tropicalis
ENSSSCG00000038534	TSR1	99	55.189	ENSXCOG00000009635	tsr1	99	56.373	Xiphophorus_couchianus
ENSSSCG00000038534	TSR1	99	54.862	ENSXMAG00000001397	tsr1	96	55.381	Xiphophorus_maculatus