EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000038585 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 670 bases
Position: chrAEMK02000400.1:140292-140961
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000046678	RRM_1	PF00076.22	2.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000051868	-	528	-	ENSSSCP00000046678	175 (aa)	-	A0A287ARU6

Gene Model

Click here to download ENSSSCG00000038585's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000038585's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000038585	-	68	57.812	ENSSSCG00000017626	-	70	54.913
ENSSSCG00000038585	-	100	68.778	ENSSSCG00000009906	SRSF9	100	68.778

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000038585	-	100	68.326	ENSG00000111786	SRSF9	100	67.873	Homo_sapiens
ENSSSCG00000038585	-	71	57.895	ENSAPOG00000013728	srsf9	68	57.485	Acanthochromis_polyacanthus
ENSSSCG00000038585	-	90	85.535	ENSAMEG00000013294	SRSF9	74	85.535	Ailuropoda_melanoleuca
ENSSSCG00000038585	-	89	58.896	ENSACIG00000015765	srsf9	65	59.756	Amphilophus_citrinellus
ENSSSCG00000038585	-	71	58.647	ENSAOCG00000002992	srsf9	68	58.084	Amphiprion_ocellaris
ENSSSCG00000038585	-	71	58.647	ENSAPEG00000011908	srsf9	68	58.084	Amphiprion_percula
ENSSSCG00000038585	-	89	51.479	ENSATEG00000019984	srsf9	68	59.763	Anabas_testudineus
ENSSSCG00000038585	-	90	71.429	ENSACAG00000002877	SRSF9	66	75.926	Anolis_carolinensis
ENSSSCG00000038585	-	90	85.535	ENSANAG00000035910	SRSF9	72	85.535	Aotus_nancymaae
ENSSSCG00000038585	-	89	58.896	ENSACLG00000015678	srsf9	65	59.756	Astatotilapia_calliptera
ENSSSCG00000038585	-	89	58.788	ENSAMXG00000032281	srsf9	68	60.606	Astyanax_mexicanus
ENSSSCG00000038585	-	100	67.873	ENSBTAG00000012792	SRSF9	100	67.421	Bos_taurus
ENSSSCG00000038585	-	100	66.968	ENSBTAG00000005584	-	100	66.968	Bos_taurus
ENSSSCG00000038585	-	100	68.326	ENSCJAG00000001187	SRSF9	100	67.873	Callithrix_jacchus
ENSSSCG00000038585	-	100	68.326	ENSCAFG00000010314	SRSF9	100	68.326	Canis_familiaris
ENSSSCG00000038585	-	100	68.326	ENSCAFG00020020612	SRSF9	100	68.326	Canis_lupus_dingo
ENSSSCG00000038585	-	100	67.873	ENSCHIG00000025274	SRSF9	100	67.421	Capra_hircus
ENSSSCG00000038585	-	99	68.182	ENSTSYG00000006848	-	99	67.727	Carlito_syrichta
ENSSSCG00000038585	-	89	72.611	ENSTSYG00000034124	-	70	72.611	Carlito_syrichta
ENSSSCG00000038585	-	99	53.881	ENSTSYG00000029305	-	98	53.425	Carlito_syrichta
ENSSSCG00000038585	-	99	59.361	ENSTSYG00000036169	-	70	75.316	Carlito_syrichta
ENSSSCG00000038585	-	62	87.037	ENSCAPG00000015483	SRSF9	82	87.037	Cavia_aperea
ENSSSCG00000038585	-	100	68.326	ENSCPOG00000033486	SRSF9	100	68.326	Cavia_porcellus
ENSSSCG00000038585	-	100	68.326	ENSCCAG00000036053	SRSF9	100	67.873	Cebus_capucinus
ENSSSCG00000038585	-	82	68.750	ENSCATG00000000421	-	70	68.750	Cercocebus_atys
ENSSSCG00000038585	-	100	68.326	ENSCATG00000021315	SRSF9	100	67.873	Cercocebus_atys
ENSSSCG00000038585	-	100	68.326	ENSCLAG00000012289	SRSF9	100	68.326	Chinchilla_lanigera
ENSSSCG00000038585	-	100	68.326	ENSCSAG00000002257	SRSF9	100	67.873	Chlorocebus_sabaeus
ENSSSCG00000038585	-	90	86.076	ENSCHOG00000009241	SRSF9	100	86.076	Choloepus_hoffmanni
ENSSSCG00000038585	-	90	76.543	ENSCPBG00000011340	SRSF9	70	76.543	Chrysemys_picta_bellii
ENSSSCG00000038585	-	90	85.535	ENSCANG00000034161	SRSF9	72	85.535	Colobus_angolensis_palliatus
ENSSSCG00000038585	-	100	67.873	ENSCGRG00001021965	Srsf9	100	67.873	Cricetulus_griseus_chok1gshd
ENSSSCG00000038585	-	69	81.818	ENSCGRG00000001879	Srsf9	77	81.818	Cricetulus_griseus_crigri
ENSSSCG00000038585	-	71	61.905	ENSCSEG00000015663	srsf9	68	60.526	Cynoglossus_semilaevis
ENSSSCG00000038585	-	70	60.000	ENSCVAG00000021417	srsf9	68	57.831	Cyprinodon_variegatus
ENSSSCG00000038585	-	84	59.236	ENSDARG00000008097	srsf9	69	59.524	Danio_rerio
ENSSSCG00000038585	-	100	68.778	ENSDNOG00000012598	SRSF9	100	68.778	Dasypus_novemcinctus
ENSSSCG00000038585	-	100	67.421	ENSDORG00000013162	Srsf9	100	66.968	Dipodomys_ordii
ENSSSCG00000038585	-	73	86.719	ENSETEG00000002606	SRSF9	62	86.719	Echinops_telfairi
ENSSSCG00000038585	-	100	68.778	ENSEASG00005004727	SRSF9	100	68.778	Equus_asinus_asinus
ENSSSCG00000038585	-	100	68.778	ENSECAG00000009116	SRSF9	100	68.778	Equus_caballus
ENSSSCG00000038585	-	88	58.861	ENSELUG00000012644	SRSF9	64	58.861	Esox_lucius
ENSSSCG00000038585	-	89	55.556	ENSELUG00000021669	srsf9	69	57.558	Esox_lucius
ENSSSCG00000038585	-	100	68.326	ENSFCAG00000011011	SRSF9	100	68.326	Felis_catus
ENSSSCG00000038585	-	69	81.818	ENSFDAG00000004364	SRSF9	77	81.818	Fukomys_damarensis
ENSSSCG00000038585	-	89	55.422	ENSFHEG00000020851	srsf9	69	57.831	Fundulus_heteroclitus
ENSSSCG00000038585	-	72	56.115	ENSGMOG00000007980	srsf9	67	53.529	Gadus_morhua
ENSSSCG00000038585	-	85	49.686	ENSGAFG00000009123	srsf9	74	58.491	Gambusia_affinis
ENSSSCG00000038585	-	85	47.929	ENSGACG00000016921	srsf9	70	53.073	Gasterosteus_aculeatus
ENSSSCG00000038585	-	90	75.926	ENSGAGG00000016015	SRSF9	70	75.926	Gopherus_agassizii
ENSSSCG00000038585	-	90	85.535	ENSGGOG00000027142	-	77	84.472	Gorilla_gorilla
ENSSSCG00000038585	-	89	58.896	ENSHBUG00000019320	srsf9	68	59.756	Haplochromis_burtoni
ENSSSCG00000038585	-	100	68.326	ENSHGLG00000014372	SRSF9	100	68.326	Heterocephalus_glaber_female
ENSSSCG00000038585	-	89	78.344	ENSHGLG00000003582	-	78	78.344	Heterocephalus_glaber_female
ENSSSCG00000038585	-	90	77.358	ENSHGLG00100015198	-	78	77.358	Heterocephalus_glaber_male
ENSSSCG00000038585	-	100	68.326	ENSHGLG00100013695	SRSF9	100	68.326	Heterocephalus_glaber_male
ENSSSCG00000038585	-	71	30.935	ENSHCOG00000017311	srsf9	70	36.628	Hippocampus_comes
ENSSSCG00000038585	-	88	58.750	ENSIPUG00000005511	srsf9	68	61.963	Ictalurus_punctatus
ENSSSCG00000038585	-	100	68.778	ENSSTOG00000007344	SRSF9	100	68.778	Ictidomys_tridecemlineatus
ENSSSCG00000038585	-	100	66.968	ENSJJAG00000013374	Srsf9	100	66.968	Jaculus_jaculus
ENSSSCG00000038585	-	89	51.479	ENSKMAG00000007113	srsf9	68	57.988	Kryptolebias_marmoratus
ENSSSCG00000038585	-	89	51.852	ENSLBEG00000017430	srsf9	65	59.259	Labrus_bergylta
ENSSSCG00000038585	-	91	65.244	ENSLACG00000018228	SRSF9	73	68.293	Latimeria_chalumnae
ENSSSCG00000038585	-	88	61.250	ENSLOCG00000004044	srsf9	65	62.112	Lepisosteus_oculatus
ENSSSCG00000038585	-	90	85.443	ENSLAFG00000006381	SRSF9	90	85.443	Loxodonta_africana
ENSSSCG00000038585	-	90	85.535	ENSMFAG00000039423	SRSF9	85	85.535	Macaca_fascicularis
ENSSSCG00000038585	-	82	70.139	ENSMMUG00000040941	-	69	70.139	Macaca_mulatta
ENSSSCG00000038585	-	90	85.535	ENSMMUG00000016494	SRSF9	56	85.535	Macaca_mulatta
ENSSSCG00000038585	-	100	68.326	ENSMNEG00000044129	SRSF9	100	67.873	Macaca_nemestrina
ENSSSCG00000038585	-	90	85.535	ENSMLEG00000041155	SRSF9	76	85.535	Mandrillus_leucophaeus
ENSSSCG00000038585	-	89	54.819	ENSMAMG00000011581	srsf9	68	58.084	Mastacembelus_armatus
ENSSSCG00000038585	-	89	58.896	ENSMZEG00005018422	srsf9	65	59.756	Maylandia_zebra
ENSSSCG00000038585	-	100	67.421	ENSMAUG00000011403	Srsf9	100	66.968	Mesocricetus_auratus
ENSSSCG00000038585	-	100	68.326	ENSMICG00000008674	SRSF9	100	68.326	Microcebus_murinus
ENSSSCG00000038585	-	90	84.277	ENSMOCG00000021163	Srsf9	100	66.516	Microtus_ochrogaster
ENSSSCG00000038585	-	85	51.534	ENSMMOG00000009349	srsf9	65	56.977	Mola_mola
ENSSSCG00000038585	-	90	72.956	ENSMODG00000003146	SRSF9	73	75.472	Monodelphis_domestica
ENSSSCG00000038585	-	89	55.901	ENSMALG00000011678	srsf9	67	62.112	Monopterus_albus
ENSSSCG00000038585	-	99	68.182	MGP_CAROLIEiJ_G0027622	Srsf9	99	67.727	Mus_caroli
ENSSSCG00000038585	-	99	68.182	ENSMUSG00000029538	Srsf9	99	67.727	Mus_musculus
ENSSSCG00000038585	-	75	75.940	MGP_PahariEiJ_G0024202	-	78	79.839	Mus_pahari
ENSSSCG00000038585	-	99	68.182	MGP_SPRETEiJ_G0028620	Srsf9	99	67.727	Mus_spretus
ENSSSCG00000038585	-	100	67.713	ENSMPUG00000003193	SRSF9	99	67.265	Mustela_putorius_furo
ENSSSCG00000038585	-	100	68.161	ENSMLUG00000010346	SRSF9	99	68.161	Myotis_lucifugus
ENSSSCG00000038585	-	100	67.873	ENSNGAG00000012738	Srsf9	100	67.873	Nannospalax_galili
ENSSSCG00000038585	-	89	58.896	ENSNBRG00000003888	srsf9	68	59.756	Neolamprologus_brichardi
ENSSSCG00000038585	-	82	77.083	ENSNLEG00000033316	-	70	77.083	Nomascus_leucogenys
ENSSSCG00000038585	-	100	68.326	ENSNLEG00000015661	SRSF9	100	67.873	Nomascus_leucogenys
ENSSSCG00000038585	-	53	70.213	ENSMEUG00000004069	SRSF9	59	71.277	Notamacropus_eugenii
ENSSSCG00000038585	-	100	66.516	ENSOPRG00000004234	SRSF9	100	66.516	Ochotona_princeps
ENSSSCG00000038585	-	89	58.896	ENSONIG00000013974	srsf9	68	59.756	Oreochromis_niloticus
ENSSSCG00000038585	-	90	85.714	ENSOCUG00000024603	SRSF9	100	68.326	Oryctolagus_cuniculus
ENSSSCG00000038585	-	89	50.898	ENSORLG00000023709	srsf9	69	57.485	Oryzias_latipes
ENSSSCG00000038585	-	89	50.898	ENSORLG00020017678	srsf9	69	57.485	Oryzias_latipes_hni
ENSSSCG00000038585	-	89	50.898	ENSORLG00015004857	srsf9	69	57.485	Oryzias_latipes_hsok
ENSSSCG00000038585	-	89	51.497	ENSOMEG00000002601	srsf9	69	56.287	Oryzias_melastigma
ENSSSCG00000038585	-	100	68.778	ENSOGAG00000003852	SRSF9	99	68.326	Otolemur_garnettii
ENSSSCG00000038585	-	95	66.038	ENSOARG00000012402	SRSF9	100	63.393	Ovis_aries
ENSSSCG00000038585	-	90	85.535	ENSPPAG00000034420	SRSF9	68	85.535	Pan_paniscus
ENSSSCG00000038585	-	100	68.326	ENSPPRG00000001309	SRSF9	100	68.326	Panthera_pardus
ENSSSCG00000038585	-	90	86.076	ENSPTIG00000010327	SRSF9	71	86.076	Panthera_tigris_altaica
ENSSSCG00000038585	-	100	68.326	ENSPTRG00000005535	SRSF9	100	67.873	Pan_troglodytes
ENSSSCG00000038585	-	100	68.326	ENSPANG00000016072	SRSF9	100	67.873	Papio_anubis
ENSSSCG00000038585	-	70	59.843	ENSPKIG00000024851	SRSF9	61	59.355	Paramormyrops_kingsleyae
ENSSSCG00000038585	-	84	60.784	ENSPKIG00000023787	srsf9	64	62.179	Paramormyrops_kingsleyae
ENSSSCG00000038585	-	70	48.905	ENSPMGG00000016215	srsf9	66	49.091	Periophthalmus_magnuspinnatus
ENSSSCG00000038585	-	100	67.421	ENSPEMG00000016311	Srsf9	100	67.421	Peromyscus_maniculatus_bairdii
ENSSSCG00000038585	-	90	76.101	ENSPCIG00000025998	SRSF9	65	76.101	Phascolarctos_cinereus
ENSSSCG00000038585	-	70	54.074	ENSPFOG00000019792	srsf9	69	56.069	Poecilia_formosa
ENSSSCG00000038585	-	70	61.290	ENSPLAG00000022740	srsf9	68	57.407	Poecilia_latipinna
ENSSSCG00000038585	-	70	54.074	ENSPMEG00000008809	srsf9	69	56.069	Poecilia_mexicana
ENSSSCG00000038585	-	70	62.097	ENSPREG00000013165	srsf9	66	57.229	Poecilia_reticulata
ENSSSCG00000038585	-	100	67.421	ENSPPYG00000019910	-	100	66.968	Pongo_abelii
ENSSSCG00000038585	-	100	66.968	ENSPPYG00000029896	-	100	66.968	Pongo_abelii
ENSSSCG00000038585	-	100	68.326	ENSPPYG00000005031	-	100	67.873	Pongo_abelii
ENSSSCG00000038585	-	90	84.177	ENSPCAG00000013889	SRSF9	100	84.177	Procavia_capensis
ENSSSCG00000038585	-	100	68.326	ENSPCOG00000015115	SRSF9	100	68.326	Propithecus_coquereli
ENSSSCG00000038585	-	100	68.778	ENSPVAG00000002229	SRSF9	100	68.778	Pteropus_vampyrus
ENSSSCG00000038585	-	89	58.896	ENSPNYG00000008644	srsf9	68	59.756	Pundamilia_nyererei
ENSSSCG00000038585	-	84	60.131	ENSPNAG00000003588	srsf9	68	59.756	Pygocentrus_nattereri
ENSSSCG00000038585	-	100	66.968	ENSRNOG00000001163	Srsf9	100	66.516	Rattus_norvegicus
ENSSSCG00000038585	-	90	86.076	ENSRBIG00000042683	SRSF9	85	86.076	Rhinopithecus_bieti
ENSSSCG00000038585	-	90	85.535	ENSRROG00000041980	SRSF9	85	85.535	Rhinopithecus_roxellana
ENSSSCG00000038585	-	63	82.883	ENSSBOG00000017305	SRSF9	86	82.883	Saimiri_boliviensis_boliviensis
ENSSSCG00000038585	-	90	73.292	ENSSHAG00000005685	SRSF9	100	73.913	Sarcophilus_harrisii
ENSSSCG00000038585	-	84	60.131	ENSSFOG00015017303	srsf9	64	61.538	Scleropages_formosus
ENSSSCG00000038585	-	85	60.000	ENSSFOG00015002476	SRSF9	64	60.000	Scleropages_formosus
ENSSSCG00000038585	-	90	58.788	ENSSMAG00000002039	srsf9	67	59.394	Scophthalmus_maximus
ENSSSCG00000038585	-	89	49.708	ENSSDUG00000018908	srsf9	69	57.310	Seriola_dumerili
ENSSSCG00000038585	-	89	49.708	ENSSLDG00000012305	srsf9	69	57.310	Seriola_lalandi_dorsalis
ENSSSCG00000038585	-	90	85.443	ENSSARG00000003434	SRSF9	100	85.443	Sorex_araneus
ENSSSCG00000038585	-	90	72.222	ENSSPUG00000015680	SRSF9	69	75.460	Sphenodon_punctatus
ENSSSCG00000038585	-	71	55.147	ENSSPAG00000006285	srsf9	69	57.059	Stegastes_partitus
ENSSSCG00000038585	-	71	31.206	ENSTRUG00000012723	srsf9	63	35.928	Takifugu_rubripes
ENSSSCG00000038585	-	71	61.905	ENSTNIG00000000697	srsf9	63	59.211	Tetraodon_nigroviridis
ENSSSCG00000038585	-	90	84.277	ENSTBEG00000008499	SRSF9	80	84.277	Tupaia_belangeri
ENSSSCG00000038585	-	90	86.164	ENSTTRG00000000145	SRSF9	81	86.164	Tursiops_truncatus
ENSSSCG00000038585	-	100	68.778	ENSUAMG00000015527	SRSF9	100	68.778	Ursus_americanus
ENSSSCG00000038585	-	90	86.709	ENSUMAG00000006151	SRSF9	70	86.709	Ursus_maritimus
ENSSSCG00000038585	-	90	54.088	ENSVPAG00000010361	SRSF9	86	54.088	Vicugna_pacos
ENSSSCG00000038585	-	100	68.326	ENSVVUG00000021065	SRSF9	100	68.326	Vulpes_vulpes
ENSSSCG00000038585	-	90	65.839	ENSXETG00000026940	srsf9	70	69.565	Xenopus_tropicalis
ENSSSCG00000038585	-	85	49.686	ENSXMAG00000001438	srsf9	75	58.491	Xiphophorus_maculatus