EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000038749 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 1061 bases
Position: chrX:53939564-53940624
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000038266	RRM_1	PF00076.22	2.9e-16	1	2
ENSSSCP00000038266	RRM_1	PF00076.22	2.9e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000058418	-	795	-	ENSSSCP00000038266	264 (aa)	-	A0A287A3D5

Gene Model

Click here to download ENSSSCG00000038749's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000038749's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000038749	-	57	48.958	ENSSSCG00000036878	-	91	42.241
ENSSSCG00000038749	-	60	43.085	ENSSSCG00000033138	-	87	45.353
ENSSSCG00000038749	-	53	33.742	ENSSSCG00000038505	MSI2	50	33.750
ENSSSCG00000038749	-	50	57.055	ENSSSCG00000000288	HNRNPA1	88	44.545
ENSSSCG00000038749	-	94	43.463	ENSSSCG00000036350	HNRNPA2B1	91	45.848

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000038749	-	50	64.634	ENSG00000170144	HNRNPA3	92	58.537	Homo_sapiens
ENSSSCG00000038749	-	50	65.217	ENSAMEG00000011920	HNRNPA3	92	53.731	Ailuropoda_melanoleuca
ENSSSCG00000038749	-	50	64.242	ENSAPLG00000009620	HNRNPA3	86	56.135	Anas_platyrhynchos
ENSSSCG00000038749	-	72	56.279	ENSANAG00000033364	-	85	46.965	Aotus_nancymaae
ENSSSCG00000038749	-	50	54.601	ENSANAG00000030267	-	83	49.756	Aotus_nancymaae
ENSSSCG00000038749	-	50	50.303	ENSANAG00000030456	-	85	46.875	Aotus_nancymaae
ENSSSCG00000038749	-	65	50.476	ENSANAG00000023435	-	83	51.712	Aotus_nancymaae
ENSSSCG00000038749	-	50	61.438	ENSBTAG00000052891	-	79	52.838	Bos_taurus
ENSSSCG00000038749	-	50	64.242	ENSBTAG00000021580	HNRNPA3	87	58.663	Bos_taurus
ENSSSCG00000038749	-	50	64.024	ENSBTAG00000045937	-	92	56.535	Bos_taurus
ENSSSCG00000038749	-	56	53.125	ENSBTAG00000048345	-	56	58.642	Bos_taurus
ENSSSCG00000038749	-	50	64.242	ENSCJAG00000023383	-	82	58.371	Callithrix_jacchus
ENSSSCG00000038749	-	58	56.111	ENSCJAG00000041746	-	84	55.399	Callithrix_jacchus
ENSSSCG00000038749	-	50	64.242	ENSCAFG00020006299	-	83	56.170	Canis_lupus_dingo
ENSSSCG00000038749	-	50	64.242	ENSCHIG00000015430	-	86	52.439	Capra_hircus
ENSSSCG00000038749	-	50	64.242	ENSCHIG00000025404	-	89	58.663	Capra_hircus
ENSSSCG00000038749	-	57	55.233	ENSCHIG00000011332	-	81	52.632	Capra_hircus
ENSSSCG00000038749	-	92	52.963	ENSTSYG00000031426	-	92	50.355	Carlito_syrichta
ENSSSCG00000038749	-	58	52.151	ENSTSYG00000036821	-	91	51.429	Carlito_syrichta
ENSSSCG00000038749	-	50	63.636	ENSCAPG00000009337	-	88	58.232	Cavia_aperea
ENSSSCG00000038749	-	50	63.636	ENSCPOG00000011301	-	88	57.927	Cavia_porcellus
ENSSSCG00000038749	-	50	50.000	ENSCCAG00000028618	-	85	41.667	Cebus_capucinus
ENSSSCG00000038749	-	50	64.516	ENSCCAG00000031850	-	91	55.000	Cebus_capucinus
ENSSSCG00000038749	-	56	57.282	ENSCCAG00000025864	-	91	55.657	Cebus_capucinus
ENSSSCG00000038749	-	50	61.688	ENSCCAG00000021011	-	82	55.245	Cebus_capucinus
ENSSSCG00000038749	-	50	57.233	ENSCATG00000042348	-	89	50.331	Cercocebus_atys
ENSSSCG00000038749	-	50	62.092	ENSCATG00000045141	-	62	54.255	Cercocebus_atys
ENSSSCG00000038749	-	96	50.955	ENSCATG00000041727	-	89	55.556	Cercocebus_atys
ENSSSCG00000038749	-	50	60.606	ENSCATG00000005303	-	79	53.583	Cercocebus_atys
ENSSSCG00000038749	-	56	45.408	ENSCLAG00000004953	-	69	51.029	Chinchilla_lanigera
ENSSSCG00000038749	-	51	55.333	ENSCLAG00000013454	-	96	53.873	Chinchilla_lanigera
ENSSSCG00000038749	-	50	64.242	ENSCPBG00000003430	HNRNPA3	86	52.802	Chrysemys_picta_bellii
ENSSSCG00000038749	-	50	55.944	ENSCANG00000036899	-	94	50.000	Colobus_angolensis_palliatus
ENSSSCG00000038749	-	50	64.242	ENSCANG00000037524	HNRNPA3	87	58.232	Colobus_angolensis_palliatus
ENSSSCG00000038749	-	68	43.500	ENSCANG00000029162	-	92	51.429	Colobus_angolensis_palliatus
ENSSSCG00000038749	-	81	50.417	ENSCANG00000041842	-	94	53.041	Colobus_angolensis_palliatus
ENSSSCG00000038749	-	80	40.408	ENSCGRG00001000756	-	72	46.544	Cricetulus_griseus_chok1gshd
ENSSSCG00000038749	-	50	65.190	ENSCGRG00001015633	-	91	52.147	Cricetulus_griseus_chok1gshd
ENSSSCG00000038749	-	50	60.606	ENSCGRG00001018034	-	84	52.508	Cricetulus_griseus_chok1gshd
ENSSSCG00000038749	-	58	50.847	ENSCGRG00000006419	-	83	42.953	Cricetulus_griseus_crigri
ENSSSCG00000038749	-	50	56.364	ENSCGRG00000011128	-	83	46.349	Cricetulus_griseus_crigri
ENSSSCG00000038749	-	51	62.092	ENSCGRG00000012749	-	86	58.654	Cricetulus_griseus_crigri
ENSSSCG00000038749	-	50	41.104	ENSCSEG00000003421	hnrnpa0b	51	41.104	Cynoglossus_semilaevis
ENSSSCG00000038749	-	50	55.828	ENSCSEG00000005613	HNRNPA3	90	40.000	Cynoglossus_semilaevis
ENSSSCG00000038749	-	50	39.264	ENSDARG00000036161	hnrnpa0l	54	39.264	Danio_rerio
ENSSSCG00000038749	-	84	46.975	ENSDNOG00000044709	-	90	46.809	Dasypus_novemcinctus
ENSSSCG00000038749	-	50	61.212	ENSDORG00000024966	-	94	56.332	Dipodomys_ordii
ENSSSCG00000038749	-	75	39.726	ENSETEG00000012195	-	77	38.967	Echinops_telfairi
ENSSSCG00000038749	-	50	49.068	ENSETEG00000011413	-	82	45.989	Echinops_telfairi
ENSSSCG00000038749	-	50	64.634	ENSEASG00005022530	HNRNPA3	85	56.507	Equus_asinus_asinus
ENSSSCG00000038749	-	50	64.634	ENSECAG00000023237	HNRNPA3	85	56.357	Equus_caballus
ENSSSCG00000038749	-	50	59.756	ENSEEUG00000000925	-	65	59.756	Erinaceus_europaeus
ENSSSCG00000038749	-	50	64.242	ENSFALG00000003215	HNRNPA3	84	56.481	Ficedula_albicollis
ENSSSCG00000038749	-	55	54.777	ENSFDAG00000018460	-	83	53.261	Fukomys_damarensis
ENSSSCG00000038749	-	50	64.634	ENSFDAG00000006685	HNRNPA3	92	58.537	Fukomys_damarensis
ENSSSCG00000038749	-	50	55.215	ENSFHEG00000007482	HNRNPA3	89	42.633	Fundulus_heteroclitus
ENSSSCG00000038749	-	50	54.545	ENSGMOG00000004230	HNRNPA3	89	47.742	Gadus_morhua
ENSSSCG00000038749	-	50	64.242	ENSGALG00000009250	HNRNPA3	85	56.481	Gallus_gallus
ENSSSCG00000038749	-	50	55.215	ENSGAFG00000004116	HNRNPA3	91	42.553	Gambusia_affinis
ENSSSCG00000038749	-	50	41.818	ENSGACG00000016447	hnrnpa0b	56	42.331	Gasterosteus_aculeatus
ENSSSCG00000038749	-	58	52.326	ENSGGOG00000040721	-	91	47.782	Gorilla_gorilla
ENSSSCG00000038749	-	50	64.242	ENSGGOG00000006130	HNRNPA3	87	58.537	Gorilla_gorilla
ENSSSCG00000038749	-	96	47.119	ENSGGOG00000039142	-	92	43.125	Gorilla_gorilla
ENSSSCG00000038749	-	95	49.530	ENSGGOG00000025446	-	91	53.560	Gorilla_gorilla
ENSSSCG00000038749	-	50	61.212	ENSGGOG00000022020	-	89	52.055	Gorilla_gorilla
ENSSSCG00000038749	-	56	56.098	ENSHGLG00000014445	-	86	51.497	Heterocephalus_glaber_female
ENSSSCG00000038749	-	50	63.636	ENSHGLG00000012306	-	85	60.396	Heterocephalus_glaber_female
ENSSSCG00000038749	-	56	60.795	ENSHGLG00000014107	-	89	55.140	Heterocephalus_glaber_female
ENSSSCG00000038749	-	50	61.585	ENSHGLG00000003841	-	80	57.525	Heterocephalus_glaber_female
ENSSSCG00000038749	-	50	64.242	ENSHGLG00000005451	HNRNPA3	87	58.537	Heterocephalus_glaber_female
ENSSSCG00000038749	-	58	55.851	ENSHGLG00000006166	-	83	51.673	Heterocephalus_glaber_female
ENSSSCG00000038749	-	50	61.585	ENSHGLG00000018499	-	87	53.974	Heterocephalus_glaber_female
ENSSSCG00000038749	-	50	64.024	ENSHGLG00100005156	-	87	57.927	Heterocephalus_glaber_male
ENSSSCG00000038749	-	50	64.242	ENSHGLG00100010504	-	87	57.622	Heterocephalus_glaber_male
ENSSSCG00000038749	-	50	56.442	ENSHCOG00000000313	HNRNPA3	90	43.653	Hippocampus_comes
ENSSSCG00000038749	-	92	42.140	ENSSTOG00000034897	-	91	44.089	Ictidomys_tridecemlineatus
ENSSSCG00000038749	-	56	52.970	ENSSTOG00000023462	-	88	54.259	Ictidomys_tridecemlineatus
ENSSSCG00000038749	-	50	64.242	ENSSTOG00000025125	HNRNPA3	87	58.537	Ictidomys_tridecemlineatus
ENSSSCG00000038749	-	50	61.818	ENSSTOG00000025292	-	88	56.303	Ictidomys_tridecemlineatus
ENSSSCG00000038749	-	50	63.190	ENSJJAG00000018392	-	91	52.188	Jaculus_jaculus
ENSSSCG00000038749	-	50	61.212	ENSMFAG00000032902	-	60	61.212	Macaca_fascicularis
ENSSSCG00000038749	-	50	57.233	ENSMFAG00000031209	-	88	53.894	Macaca_fascicularis
ENSSSCG00000038749	-	50	61.350	ENSMFAG00000037149	-	86	61.350	Macaca_fascicularis
ENSSSCG00000038749	-	50	58.491	ENSMMUG00000045923	-	88	54.517	Macaca_mulatta
ENSSSCG00000038749	-	50	64.634	ENSMMUG00000001858	-	87	59.146	Macaca_mulatta
ENSSSCG00000038749	-	50	61.818	ENSMMUG00000043526	-	80	55.763	Macaca_mulatta
ENSSSCG00000038749	-	71	54.425	ENSMNEG00000038740	-	93	50.177	Macaca_nemestrina
ENSSSCG00000038749	-	50	61.184	ENSMNEG00000039618	-	89	55.873	Macaca_nemestrina
ENSSSCG00000038749	-	50	61.212	ENSMNEG00000036683	-	84	54.206	Macaca_nemestrina
ENSSSCG00000038749	-	50	62.577	ENSMNEG00000042504	-	65	62.577	Macaca_nemestrina
ENSSSCG00000038749	-	50	64.242	ENSMNEG00000034936	-	86	45.326	Macaca_nemestrina
ENSSSCG00000038749	-	50	61.585	ENSMLEG00000032671	-	70	56.054	Mandrillus_leucophaeus
ENSSSCG00000038749	-	50	55.828	ENSMAMG00000006307	HNRNPA3	94	43.030	Mastacembelus_armatus
ENSSSCG00000038749	-	50	43.636	ENSMGAG00000007915	-	81	43.636	Meleagris_gallopavo
ENSSSCG00000038749	-	50	64.242	ENSMGAG00000009565	HNRNPA3	88	53.640	Meleagris_gallopavo
ENSSSCG00000038749	-	57	43.103	ENSMAUG00000000115	-	91	43.464	Mesocricetus_auratus
ENSSSCG00000038749	-	50	57.233	ENSMAUG00000015650	-	87	48.658	Mesocricetus_auratus
ENSSSCG00000038749	-	50	64.634	ENSMICG00000049540	-	93	58.537	Microcebus_murinus
ENSSSCG00000038749	-	50	64.024	ENSMICG00000012083	-	91	54.462	Microcebus_murinus
ENSSSCG00000038749	-	59	42.045	ENSMOCG00000021968	-	89	35.235	Microtus_ochrogaster
ENSSSCG00000038749	-	50	66.013	ENSMOCG00000015117	-	85	59.177	Microtus_ochrogaster
ENSSSCG00000038749	-	94	43.279	ENSMOCG00000016310	-	91	51.572	Microtus_ochrogaster
ENSSSCG00000038749	-	50	41.212	ENSMALG00000008866	hnrnpa0b	54	41.718	Monopterus_albus
ENSSSCG00000038749	-	78	53.306	ENSMUSG00000099115	Gm17190	70	55.253	Mus_musculus
ENSSSCG00000038749	-	58	50.568	ENSMPUG00000009761	-	80	51.705	Mustela_putorius_furo
ENSSSCG00000038749	-	50	64.242	ENSMPUG00000014103	-	85	56.170	Mustela_putorius_furo
ENSSSCG00000038749	-	50	64.242	ENSMLUG00000003906	-	90	58.681	Myotis_lucifugus
ENSSSCG00000038749	-	67	53.922	ENSNGAG00000011947	-	65	61.029	Nannospalax_galili
ENSSSCG00000038749	-	50	64.634	ENSNGAG00000021745	Hnrnpa3	94	57.764	Nannospalax_galili
ENSSSCG00000038749	-	58	56.354	ENSNGAG00000003815	-	86	54.630	Nannospalax_galili
ENSSSCG00000038749	-	58	50.500	ENSNLEG00000034545	-	89	52.830	Nomascus_leucogenys
ENSSSCG00000038749	-	50	64.242	ENSNLEG00000028401	-	86	50.292	Nomascus_leucogenys
ENSSSCG00000038749	-	50	61.212	ENSNLEG00000015913	-	92	56.707	Nomascus_leucogenys
ENSSSCG00000038749	-	50	66.250	ENSNLEG00000010858	-	91	59.752	Nomascus_leucogenys
ENSSSCG00000038749	-	59	47.619	ENSNLEG00000032894	-	57	53.704	Nomascus_leucogenys
ENSSSCG00000038749	-	50	64.242	ENSMEUG00000013622	HNRNPA3	86	58.589	Notamacropus_eugenii
ENSSSCG00000038749	-	58	54.737	ENSODEG00000010232	-	87	52.121	Octodon_degus
ENSSSCG00000038749	-	76	46.610	ENSODEG00000015395	-	78	52.326	Octodon_degus
ENSSSCG00000038749	-	50	56.287	ENSOCUG00000006431	-	81	52.174	Oryctolagus_cuniculus
ENSSSCG00000038749	-	50	64.024	ENSOCUG00000002743	-	90	51.689	Oryctolagus_cuniculus
ENSSSCG00000038749	-	58	58.101	ENSOGAG00000025948	-	92	56.113	Otolemur_garnettii
ENSSSCG00000038749	-	50	63.855	ENSOGAG00000028132	HNRNPA3	87	53.153	Otolemur_garnettii
ENSSSCG00000038749	-	50	64.242	ENSOARG00000017442	HNRNPA3	87	58.663	Ovis_aries
ENSSSCG00000038749	-	50	64.242	ENSPPAG00000023768	HNRNPA3	87	58.537	Pan_paniscus
ENSSSCG00000038749	-	58	53.757	ENSPPAG00000040384	-	82	48.639	Pan_paniscus
ENSSSCG00000038749	-	50	61.212	ENSPPAG00000030037	-	73	56.621	Pan_paniscus
ENSSSCG00000038749	-	50	60.870	ENSPPRG00000015090	-	64	61.250	Panthera_pardus
ENSSSCG00000038749	-	95	43.214	ENSPPRG00000009266	-	83	38.816	Panthera_pardus
ENSSSCG00000038749	-	50	64.557	ENSPPRG00000022001	-	82	52.697	Panthera_pardus
ENSSSCG00000038749	-	50	64.242	ENSPTIG00000014387	-	70	56.538	Panthera_tigris_altaica
ENSSSCG00000038749	-	95	43.525	ENSPTIG00000021689	-	83	39.145	Panthera_tigris_altaica
ENSSSCG00000038749	-	50	64.242	ENSPTRG00000012676	HNRNPA3	87	58.537	Pan_troglodytes
ENSSSCG00000038749	-	50	55.844	ENSPTRG00000051354	-	82	50.000	Pan_troglodytes
ENSSSCG00000038749	-	50	65.000	ENSPTRG00000052291	-	72	57.848	Pan_troglodytes
ENSSSCG00000038749	-	50	56.627	ENSPANG00000022665	-	66	49.383	Papio_anubis
ENSSSCG00000038749	-	57	59.459	ENSPANG00000013447	-	91	57.927	Papio_anubis
ENSSSCG00000038749	-	89	41.319	ENSPANG00000019564	-	97	50.877	Papio_anubis
ENSSSCG00000038749	-	50	43.636	ENSPSIG00000000035	-	62	43.636	Pelodiscus_sinensis
ENSSSCG00000038749	-	50	64.242	ENSPSIG00000003011	HNRNPA3	83	52.318	Pelodiscus_sinensis
ENSSSCG00000038749	-	50	64.634	ENSPCIG00000025443	HNRNPA3	86	60.554	Phascolarctos_cinereus
ENSSSCG00000038749	-	50	55.215	ENSPLAG00000009033	HNRNPA3	86	43.243	Poecilia_latipinna
ENSSSCG00000038749	-	51	58.434	ENSPPYG00000016683	-	68	58.434	Pongo_abelii
ENSSSCG00000038749	-	67	45.536	ENSPPYG00000001212	-	85	54.839	Pongo_abelii
ENSSSCG00000038749	-	50	60.976	ENSPPYG00000001326	-	84	60.976	Pongo_abelii
ENSSSCG00000038749	-	89	46.512	ENSPPYG00000003382	-	96	46.038	Pongo_abelii
ENSSSCG00000038749	-	50	52.761	ENSPCOG00000020527	-	87	46.250	Propithecus_coquereli
ENSSSCG00000038749	-	50	64.242	ENSPVAG00000010380	HNRNPA3	85	57.231	Pteropus_vampyrus
ENSSSCG00000038749	-	50	57.669	ENSPNAG00000021384	HNRNPA3	91	48.328	Pygocentrus_nattereri
ENSSSCG00000038749	-	72	49.765	ENSRBIG00000036332	-	85	50.000	Rhinopithecus_bieti
ENSSSCG00000038749	-	95	48.993	ENSRBIG00000037409	-	82	53.226	Rhinopithecus_bieti
ENSSSCG00000038749	-	94	50.508	ENSRROG00000035998	-	90	51.485	Rhinopithecus_roxellana
ENSSSCG00000038749	-	50	61.379	ENSSBOG00000021287	-	52	61.806	Saimiri_boliviensis_boliviensis
ENSSSCG00000038749	-	50	64.242	ENSSHAG00000018255	HNRNPA3	90	58.621	Sarcophilus_harrisii
ENSSSCG00000038749	-	50	55.828	ENSSLDG00000018999	HNRNPA3	92	42.138	Seriola_lalandi_dorsalis
ENSSSCG00000038749	-	50	60.000	ENSSARG00000007605	-	64	60.000	Sorex_araneus
ENSSSCG00000038749	-	50	64.242	ENSSPUG00000005423	HNRNPA3	81	55.625	Sphenodon_punctatus
ENSSSCG00000038749	-	50	40.606	ENSSPAG00000001196	-	67	40.606	Stegastes_partitus
ENSSSCG00000038749	-	50	40.606	ENSSPAG00000021157	-	67	40.606	Stegastes_partitus
ENSSSCG00000038749	-	50	64.634	ENSTGUG00000008996	HNRNPA3	91	56.481	Taeniopygia_guttata
ENSSSCG00000038749	-	50	50.920	ENSTBEG00000017108	-	65	50.920	Tupaia_belangeri
ENSSSCG00000038749	-	50	55.215	ENSVVUG00000012340	-	76	47.907	Vulpes_vulpes
ENSSSCG00000038749	-	56	47.087	ENSVVUG00000014827	-	84	52.564	Vulpes_vulpes
ENSSSCG00000038749	-	50	63.030	ENSVVUG00000014202	-	85	49.390	Vulpes_vulpes