EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSSCG00000038865 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Sus_scrofa
Status
putative
Strand
Plus strand
Length
5380 bases
Position
chr3:55160296-55165675
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSSCP00000036455Ribosomal_L28ePF01778.179.3e-2211
ENSSSCP00000051227Ribosomal_L28ePF01778.171.4e-1811
ENSSSCP00000047847Ribosomal_L28ePF01778.171.1e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSSCT00000048762-426-ENSSSCP00000036455141 (aa)-A0A286ZXV7
ENSSSCT00000065753-396-ENSSSCP00000047847131 (aa)-A0A287AVF6
ENSSSCT00000053307-333-ENSSSCP00000051227110 (aa)-A0A287B539
Gene Model
Click here to download ENSSSCG00000038865's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000038865's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSSCG00000038865-6068.235ENSSSCG00000039543-6068.235
ENSSSCG00000038865-6592.958ENSSSCG00000039460-6589.888
ENSSSCG00000038865-6569.014ENSSSCG00000030430-6365.169
ENSSSCG00000038865-5666.667ENSSSCG00000040515-5156.180
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSSCG00000038865-8474.194ENSG00000108107RPL289989.706Homo_sapiens
ENSSSCG00000038865-6477.143ENSAPOG00000023913rpl286573.034Acanthochromis_polyacanthus
ENSSSCG00000038865-6591.549ENSAMEG00000003764RPL286588.764Ailuropoda_melanoleuca
ENSSSCG00000038865-6477.143ENSACIG00000014369rpl286573.034Amphilophus_citrinellus
ENSSSCG00000038865-6475.714ENSAOCG00000019874rpl286171.910Amphiprion_ocellaris
ENSSSCG00000038865-6475.714ENSAPEG00000020972rpl286571.910Amphiprion_percula
ENSSSCG00000038865-6477.143ENSATEG00000013839rpl286571.910Anabas_testudineus
ENSSSCG00000038865-6563.380ENSACAG00000006100-6562.921Anolis_carolinensis
ENSSSCG00000038865-6583.099ENSACAG00000015980-6578.652Anolis_carolinensis
ENSSSCG00000038865-9167.442ENSANAG00000034536RPL289991.176Aotus_nancymaae
ENSSSCG00000038865-6478.571ENSACLG00000027917rpl286474.157Astatotilapia_calliptera
ENSSSCG00000038865-6571.831ENSAMXG00000042541rpl286566.292Astyanax_mexicanus
ENSSSCG00000038865-7838.636WBGene00004442rpl-286738.636Caenorhabditis_elegans
ENSSSCG00000038865-7583.133ENSCJAG00000000869RPL289091.304Callithrix_jacchus
ENSSSCG00000038865-6590.141ENSCAFG00000002585RPL286587.640Canis_familiaris
ENSSSCG00000038865-6590.141ENSCAFG00020015496-6587.640Canis_lupus_dingo
ENSSSCG00000038865-6588.732ENSCAFG00020024049-6586.517Canis_lupus_dingo
ENSSSCG00000038865-6364.045ENSCHIG00000010485-6064.045Capra_hircus
ENSSSCG00000038865-6590.141ENSCHIG00000025540-6587.640Capra_hircus
ENSSSCG00000038865-6591.549ENSTSYG00000033853RPL286588.764Carlito_syrichta
ENSSSCG00000038865-6564.789ENSTSYG00000036697-6366.292Carlito_syrichta
ENSSSCG00000038865-6368.539ENSTSYG00000035503-7068.539Carlito_syrichta
ENSSSCG00000038865-6590.141ENSCAPG00000007161-6587.640Cavia_aperea
ENSSSCG00000038865-6591.549ENSCPOG00000012833-6588.764Cavia_porcellus
ENSSSCG00000038865-6588.732ENSCPOG00000023112-6586.517Cavia_porcellus
ENSSSCG00000038865-6583.099ENSCCAG00000018730-6974.737Cebus_capucinus
ENSSSCG00000038865-6074.242ENSCCAG00000034537-8771.233Cebus_capucinus
ENSSSCG00000038865-6591.549ENSCCAG00000025765RPL289991.176Cebus_capucinus
ENSSSCG00000038865-6464.286ENSCCAG00000003452-6062.921Cebus_capucinus
ENSSSCG00000038865-8558.065ENSCCAG00000012793-6672.941Cebus_capucinus
ENSSSCG00000038865-6570.423ENSCATG00000039353-6468.235Cercocebus_atys
ENSSSCG00000038865-7580.952ENSCATG00000031417RPL289989.706Cercocebus_atys
ENSSSCG00000038865-6591.549ENSCLAG00000000684RPL286588.764Chinchilla_lanigera
ENSSSCG00000038865-6590.141ENSCSAG00000001738-6587.640Chlorocebus_sabaeus
ENSSSCG00000038865-6591.549ENSCSAG00000018419-6587.640Chlorocebus_sabaeus
ENSSSCG00000038865-6066.667ENSCSAVG00000008832-6857.143Ciona_savignyi
ENSSSCG00000038865-6585.915ENSCANG00000021622-6584.270Colobus_angolensis_palliatus
ENSSSCG00000038865-6590.141ENSCANG00000002437-6587.640Colobus_angolensis_palliatus
ENSSSCG00000038865-6590.141ENSCANG00000038322RPL289989.706Colobus_angolensis_palliatus
ENSSSCG00000038865-5372.414ENSCANG00000008828-6459.091Colobus_angolensis_palliatus
ENSSSCG00000038865-6573.239ENSCGRG00001019521-6471.910Cricetulus_griseus_chok1gshd
ENSSSCG00000038865-6591.549ENSCGRG00001023644Rpl286588.764Cricetulus_griseus_chok1gshd
ENSSSCG00000038865-5364.000ENSCGRG00000006958-5364.000Cricetulus_griseus_crigri
ENSSSCG00000038865-6477.143ENSCSEG00000001312rpl286571.910Cynoglossus_semilaevis
ENSSSCG00000038865-6478.571ENSCVAG00000022473rpl286574.157Cyprinodon_variegatus
ENSSSCG00000038865-6478.571ENSDARG00000005791rpl286473.864Danio_rerio
ENSSSCG00000038865-6588.732ENSDNOG00000044172-6586.517Dasypus_novemcinctus
ENSSSCG00000038865-6365.000ENSDNOG00000046131RPL287565.000Dasypus_novemcinctus
ENSSSCG00000038865-6591.549ENSDORG00000012809Rpl286588.764Dipodomys_ordii
ENSSSCG00000038865-8150.562ENSEBUG00000009129rpl286958.427Eptatretus_burgeri
ENSSSCG00000038865-6591.549ENSEASG00005020779RPL286588.764Equus_asinus_asinus
ENSSSCG00000038865-6574.648ENSELUG00000001730rpl286571.910Esox_lucius
ENSSSCG00000038865-6591.549ENSFCAG00000005639-6588.764Felis_catus
ENSSSCG00000038865-6563.380ENSFCAG00000040593-5162.500Felis_catus
ENSSSCG00000038865-6591.549ENSFDAG00000021448RPL286588.764Fukomys_damarensis
ENSSSCG00000038865-6481.429ENSFHEG00000007732rpl285376.404Fundulus_heteroclitus
ENSSSCG00000038865-6574.648ENSGMOG00000015325rpl286569.663Gadus_morhua
ENSSSCG00000038865-6478.571ENSGAFG00000012973rpl286574.157Gambusia_affinis
ENSSSCG00000038865-6477.143ENSGACG00000016089rpl286570.787Gasterosteus_aculeatus
ENSSSCG00000038865-6583.099ENSGAGG00000016908RPL286579.775Gopherus_agassizii
ENSSSCG00000038865-8474.194ENSGGOG00000022653-9989.706Gorilla_gorilla
ENSSSCG00000038865-6478.571ENSHBUG00000007390rpl286474.157Haplochromis_burtoni
ENSSSCG00000038865-6590.141ENSHGLG00000009865RPL286587.640Heterocephalus_glaber_female
ENSSSCG00000038865-6590.141ENSHGLG00100005407RPL286587.640Heterocephalus_glaber_male
ENSSSCG00000038865-6480.000ENSHCOG00000003134rpl286574.157Hippocampus_comes
ENSSSCG00000038865-8162.921ENSIPUG00000004935rpl286569.663Ictalurus_punctatus
ENSSSCG00000038865-6591.549ENSSTOG00000008006RPL286587.640Ictidomys_tridecemlineatus
ENSSSCG00000038865-6591.549ENSJJAG00000019841Rpl286588.764Jaculus_jaculus
ENSSSCG00000038865-6478.571ENSKMAG00000011412rpl286575.281Kryptolebias_marmoratus
ENSSSCG00000038865-6475.714ENSLBEG00000027857rpl286571.910Labrus_bergylta
ENSSSCG00000038865-6753.125ENSLACG00000011783RPL287960.674Latimeria_chalumnae
ENSSSCG00000038865-6577.465ENSLOCG00000003073rpl286569.474Lepisosteus_oculatus
ENSSSCG00000038865-6590.141ENSLAFG00000022257RPL286587.640Loxodonta_africana
ENSSSCG00000038865-7382.716ENSMFAG00000043131RPL289989.706Macaca_fascicularis
ENSSSCG00000038865-9662.222ENSMMUG00000015901RPL289989.706Macaca_mulatta
ENSSSCG00000038865-7580.952ENSMNEG00000032714RPL289989.706Macaca_nemestrina
ENSSSCG00000038865-5381.034ENSMLEG00000039498-8271.233Mandrillus_leucophaeus
ENSSSCG00000038865-7580.952ENSMLEG00000039619RPL289989.706Mandrillus_leucophaeus
ENSSSCG00000038865-6478.571ENSMAMG00000017519rpl286574.157Mastacembelus_armatus
ENSSSCG00000038865-6478.571ENSMZEG00005002151rpl286474.157Maylandia_zebra
ENSSSCG00000038865-6591.549ENSMAUG00000021147-6588.764Mesocricetus_auratus
ENSSSCG00000038865-9261.468ENSMAUG00000004738-6884.706Mesocricetus_auratus
ENSSSCG00000038865-6573.239ENSMAUG00000017070-7074.157Mesocricetus_auratus
ENSSSCG00000038865-6591.549ENSMAUG00000000783-6588.764Mesocricetus_auratus
ENSSSCG00000038865-7547.170ENSMAUG00000016592-5747.170Mesocricetus_auratus
ENSSSCG00000038865-6591.549ENSMICG00000000996RPL288590.000Microcebus_murinus
ENSSSCG00000038865-6365.169ENSMICG00000033709-5965.169Microcebus_murinus
ENSSSCG00000038865-6587.500ENSMOCG00000006881-6584.444Microtus_ochrogaster
ENSSSCG00000038865-6590.141ENSMOCG00000008075-8272.566Microtus_ochrogaster
ENSSSCG00000038865-6591.549ENSMOCG00000006245-6588.764Microtus_ochrogaster
ENSSSCG00000038865-6475.714ENSMMOG00000004489rpl286570.787Mola_mola
ENSSSCG00000038865-6584.507ENSMODG00000000275RPL286583.146Monodelphis_domestica
ENSSSCG00000038865-6475.714ENSMALG00000004571rpl286570.787Monopterus_albus
ENSSSCG00000038865-6591.549MGP_CAROLIEiJ_G0029130Rpl286588.764Mus_caroli
ENSSSCG00000038865-6591.549ENSMUSG00000030432Rpl286588.764Mus_musculus
ENSSSCG00000038865-6591.549MGP_PahariEiJ_G0020999Rpl286587.640Mus_pahari
ENSSSCG00000038865-6591.549MGP_SPRETEiJ_G0030183Rpl286588.764Mus_spretus
ENSSSCG00000038865-6591.549ENSMPUG00000007450RPL286588.764Mustela_putorius_furo
ENSSSCG00000038865-6585.915ENSMLUG00000023198-6584.270Myotis_lucifugus
ENSSSCG00000038865-6587.324ENSMLUG00000023789-6585.393Myotis_lucifugus
ENSSSCG00000038865-6561.111ENSNGAG00000001032-6461.798Nannospalax_galili
ENSSSCG00000038865-6591.549ENSNGAG00000016459Rpl285488.764Nannospalax_galili
ENSSSCG00000038865-6478.571ENSNBRG00000006729rpl285474.157Neolamprologus_brichardi
ENSSSCG00000038865-6457.143ENSNLEG00000029689-5757.955Nomascus_leucogenys
ENSSSCG00000038865-8474.194ENSNLEG00000010503-9989.706Nomascus_leucogenys
ENSSSCG00000038865-6590.141ENSOPRG00000000463-6587.640Ochotona_princeps
ENSSSCG00000038865-6585.915ENSODEG00000019117-6584.270Octodon_degus
ENSSSCG00000038865-6588.732ENSODEG00000020377-6585.393Octodon_degus
ENSSSCG00000038865-6591.549ENSODEG00000010391-6588.764Octodon_degus
ENSSSCG00000038865-6590.141ENSODEG00000019864-6587.640Octodon_degus
ENSSSCG00000038865-6478.571ENSONIG00000007486rpl286574.157Oreochromis_niloticus
ENSSSCG00000038865-6587.324ENSOCUG00000027875-6485.393Oryctolagus_cuniculus
ENSSSCG00000038865-6591.549ENSOCUG00000027112-7774.545Oryctolagus_cuniculus
ENSSSCG00000038865-6478.571ENSORLG00000005108rpl286573.034Oryzias_latipes
ENSSSCG00000038865-6478.571ENSORLG00020007182rpl286573.034Oryzias_latipes_hni
ENSSSCG00000038865-6478.571ENSORLG00015013944rpl286573.034Oryzias_latipes_hsok
ENSSSCG00000038865-6478.571ENSOMEG00000009716rpl286573.034Oryzias_melastigma
ENSSSCG00000038865-6591.549ENSOGAG00000025533RPL286588.764Otolemur_garnettii
ENSSSCG00000038865-6591.549ENSOARG00000001428RPL286588.764Ovis_aries
ENSSSCG00000038865-6364.045ENSPPAG00000034138-6064.045Pan_paniscus
ENSSSCG00000038865-10059.864ENSPPAG00000038000-9989.706Pan_paniscus
ENSSSCG00000038865-6570.423ENSPPAG00000032901-6871.910Pan_paniscus
ENSSSCG00000038865-6591.549ENSPPRG00000012962-6588.764Panthera_pardus
ENSSSCG00000038865-6368.056ENSPPRG00000013998-5664.835Panthera_pardus
ENSSSCG00000038865-6563.380ENSPPRG00000012498-6462.500Panthera_pardus
ENSSSCG00000038865-6591.549ENSPTIG00000011191-6588.764Panthera_tigris_altaica
ENSSSCG00000038865-6570.423ENSPTRG00000043676-6171.910Pan_troglodytes
ENSSSCG00000038865-8474.194ENSPTRG00000011505RPL288374.194Pan_troglodytes
ENSSSCG00000038865-6364.045ENSPTRG00000043492-6064.045Pan_troglodytes
ENSSSCG00000038865-7580.952ENSPANG00000029716RPL289989.706Papio_anubis
ENSSSCG00000038865-6578.873ENSPKIG00000014698rpl286575.281Paramormyrops_kingsleyae
ENSSSCG00000038865-6475.714ENSPMGG00000004586rpl286570.787Periophthalmus_magnuspinnatus
ENSSSCG00000038865-6591.549ENSPEMG00000011755Rpl286588.764Peromyscus_maniculatus_bairdii
ENSSSCG00000038865-6583.099ENSPEMG00000013352-6582.022Peromyscus_maniculatus_bairdii
ENSSSCG00000038865-6574.648ENSPMAG00000008617rpl286470.787Petromyzon_marinus
ENSSSCG00000038865-6373.913ENSPCIG00000019415-7073.913Phascolarctos_cinereus
ENSSSCG00000038865-5978.462ENSPCIG00000018601-6378.313Phascolarctos_cinereus
ENSSSCG00000038865-6478.571ENSPFOG00000002206rpl286575.281Poecilia_formosa
ENSSSCG00000038865-6478.571ENSPLAG00000003206rpl286575.281Poecilia_latipinna
ENSSSCG00000038865-6478.571ENSPMEG00000000595rpl286575.281Poecilia_mexicana
ENSSSCG00000038865-6478.571ENSPREG00000002015rpl286575.281Poecilia_reticulata
ENSSSCG00000038865-6590.141ENSPPYG00000010417-6587.640Pongo_abelii
ENSSSCG00000038865-7061.039ENSPPYG00000029517-5774.026Pongo_abelii
ENSSSCG00000038865-6591.549ENSPCOG00000017000RPL289991.176Propithecus_coquereli
ENSSSCG00000038865-6588.732ENSPCOG00000007456-6585.393Propithecus_coquereli
ENSSSCG00000038865-6588.732ENSPCOG00000014236-6785.393Propithecus_coquereli
ENSSSCG00000038865-6578.873ENSPCOG00000025957-6478.652Propithecus_coquereli
ENSSSCG00000038865-6588.732ENSPVAG00000007315RPL286585.393Pteropus_vampyrus
ENSSSCG00000038865-6478.571ENSPNYG00000004757rpl286574.157Pundamilia_nyererei
ENSSSCG00000038865-6576.056ENSPNAG00000003547rpl286070.787Pygocentrus_nattereri
ENSSSCG00000038865-6591.549ENSRNOG00000037673AABR07071891.26588.764Rattus_norvegicus
ENSSSCG00000038865-6591.549ENSRNOG00000017127Rpl286588.764Rattus_norvegicus
ENSSSCG00000038865-6590.141ENSRNOG00000009240AABR07016623.16287.640Rattus_norvegicus
ENSSSCG00000038865-6588.732ENSRNOG00000061441AABR07071935.17771.818Rattus_norvegicus
ENSSSCG00000038865-6588.732ENSRBIG00000003677-6586.517Rhinopithecus_bieti
ENSSSCG00000038865-8474.194ENSRBIG00000034637RPL289989.706Rhinopithecus_bieti
ENSSSCG00000038865-8474.194ENSRROG00000028904RPL289989.706Rhinopithecus_roxellana
ENSSSCG00000038865-6574.648ENSRROG00000030502-6674.026Rhinopithecus_roxellana
ENSSSCG00000038865-5885.938ENSSBOG00000022635-7882.857Saimiri_boliviensis_boliviensis
ENSSSCG00000038865-6554.167ENSSBOG00000034324-5855.056Saimiri_boliviensis_boliviensis
ENSSSCG00000038865-6591.549ENSSBOG00000028286RPL289991.176Saimiri_boliviensis_boliviensis
ENSSSCG00000038865-6578.873ENSSFOG00015012801-6575.281Scleropages_formosus
ENSSSCG00000038865-6578.873ENSSFOG00015001292rpl286971.579Scleropages_formosus
ENSSSCG00000038865-7175.641ENSSMAG00000008756rpl286573.034Scophthalmus_maximus
ENSSSCG00000038865-6478.571ENSSDUG00000015127rpl286573.034Seriola_dumerili
ENSSSCG00000038865-6475.714ENSSLDG00000006440-8668.293Seriola_lalandi_dorsalis
ENSSSCG00000038865-6477.143ENSSLDG00000000414rpl286571.910Seriola_lalandi_dorsalis
ENSSSCG00000038865-5187.500ENSSARG00000009741RPL286573.034Sorex_araneus
ENSSSCG00000038865-6183.582ENSSPUG00000010390RPL286476.404Sphenodon_punctatus
ENSSSCG00000038865-6477.143ENSSPAG00000015122rpl285069.474Stegastes_partitus
ENSSSCG00000038865-6478.571ENSTRUG00000025383rpl286574.157Takifugu_rubripes
ENSSSCG00000038865-6477.143ENSTNIG00000002577rpl287876.812Tetraodon_nigroviridis
ENSSSCG00000038865-6591.549ENSTTRG00000002428RPL286588.764Tursiops_truncatus
ENSSSCG00000038865-5568.333ENSUAMG00000003339-6162.821Ursus_americanus
ENSSSCG00000038865-6591.549ENSUAMG00000017635RPL286588.764Ursus_americanus
ENSSSCG00000038865-6460.000ENSUAMG00000002452-6556.818Ursus_americanus
ENSSSCG00000038865-6577.465ENSXETG00000000132rpl286473.034Xenopus_tropicalis
ENSSSCG00000038865-6477.143ENSXCOG00000001554rpl286573.034Xiphophorus_couchianus
ENSSSCG00000038865-6477.143ENSXMAG00000005190rpl286573.034Xiphophorus_maculatus

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