EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000038900 (Gene tree)
Gene ID: 102162880
Gene Symbol: -
Alias: -
Full Name: pre-mRNA-splicing factor ISY1 homolog
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 23591 bases
Position: chr13:71599237-71622827
Accession: 102162880
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000037261	Isy1	PF06246.12	1.6e-98	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000055735	-	4145	XM_021069414	ENSSSCP00000037261	284 (aa)	XP_020925073	A0A287A035

Gene Model

Click here to download ENSSSCG00000038900's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000038900's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000038900	-	99	97.887	ENSG00000261796	ISY1-RAB43	86	97.887	Homo_sapiens
ENSSSCG00000038900	-	100	97.895	ENSG00000240682	ISY1	100	97.895	Homo_sapiens
ENSSSCG00000038900	-	99	97.880	ENSAMEG00000015341	-	86	97.880	Ailuropoda_melanoleuca
ENSSSCG00000038900	-	65	88.587	ENSACIG00000014723	isy1	74	88.587	Amphilophus_citrinellus
ENSSSCG00000038900	-	99	78.169	ENSAOCG00000007147	isy1	99	77.465	Amphiprion_ocellaris
ENSSSCG00000038900	-	99	70.032	ENSAPEG00000021883	isy1	99	69.401	Amphiprion_percula
ENSSSCG00000038900	-	71	73.529	ENSATEG00000009521	isy1	73	79.330	Anabas_testudineus
ENSSSCG00000038900	-	99	77.193	ENSAPLG00000014136	-	99	77.193	Anas_platyrhynchos
ENSSSCG00000038900	-	90	89.105	ENSACAG00000013166	-	99	88.716	Anolis_carolinensis
ENSSSCG00000038900	-	100	97.544	ENSANAG00000027120	-	100	97.544	Aotus_nancymaae
ENSSSCG00000038900	-	99	71.378	ENSACLG00000014430	isy1	99	71.378	Astatotilapia_calliptera
ENSSSCG00000038900	-	99	84.507	ENSAMXG00000005423	isy1	99	84.507	Astyanax_mexicanus
ENSSSCG00000038900	-	99	95.760	ENSBTAG00000030915	ISY1	99	95.760	Bos_taurus
ENSSSCG00000038900	-	94	50.554	WBGene00009966	isy-1	99	50.185	Caenorhabditis_elegans
ENSSSCG00000038900	-	100	97.544	ENSCJAG00000017419	-	100	97.544	Callithrix_jacchus
ENSSSCG00000038900	-	100	98.246	ENSCAFG00000004333	ISY1	100	98.246	Canis_familiaris
ENSSSCG00000038900	-	100	98.246	ENSCAFG00020004867	-	100	98.246	Canis_lupus_dingo
ENSSSCG00000038900	-	99	95.406	ENSCHIG00000008237	-	99	95.406	Capra_hircus
ENSSSCG00000038900	-	100	97.544	ENSTSYG00000013897	-	100	97.544	Carlito_syrichta
ENSSSCG00000038900	-	98	74.101	ENSCAPG00000016359	-	100	74.101	Cavia_aperea
ENSSSCG00000038900	-	100	98.596	ENSCPOG00000014735	-	100	98.596	Cavia_porcellus
ENSSSCG00000038900	-	100	97.895	ENSCCAG00000028517	-	100	97.895	Cebus_capucinus
ENSSSCG00000038900	-	100	98.246	ENSCATG00000030672	-	100	98.246	Cercocebus_atys
ENSSSCG00000038900	-	100	98.252	ENSCLAG00000007518	-	100	98.252	Chinchilla_lanigera
ENSSSCG00000038900	-	100	98.246	ENSCSAG00000008798	-	100	98.246	Chlorocebus_sabaeus
ENSSSCG00000038900	-	99	90.459	ENSCPBG00000026346	-	99	90.106	Chrysemys_picta_bellii
ENSSSCG00000038900	-	99	64.789	ENSCING00000000716	-	99	64.085	Ciona_intestinalis
ENSSSCG00000038900	-	99	65.278	ENSCSAVG00000008992	-	99	64.211	Ciona_savignyi
ENSSSCG00000038900	-	100	98.246	ENSCANG00000037761	-	100	98.246	Colobus_angolensis_palliatus
ENSSSCG00000038900	-	100	98.246	ENSCGRG00001003415	Isy1	100	98.246	Cricetulus_griseus_chok1gshd
ENSSSCG00000038900	-	100	98.246	ENSCGRG00000011641	Isy1	100	98.246	Cricetulus_griseus_crigri
ENSSSCG00000038900	-	92	69.466	ENSCSEG00000020382	isy1	95	72.000	Cynoglossus_semilaevis
ENSSSCG00000038900	-	99	78.873	ENSCVAG00000000650	isy1	99	78.873	Cyprinodon_variegatus
ENSSSCG00000038900	-	99	83.099	ENSDARG00000063466	isy1	99	83.099	Danio_rerio
ENSSSCG00000038900	-	100	96.853	ENSDNOG00000002763	-	100	96.853	Dasypus_novemcinctus
ENSSSCG00000038900	-	97	98.556	ENSDORG00000006886	Isy1	100	98.556	Dipodomys_ordii
ENSSSCG00000038900	-	95	62.044	FBgn0037550	CG9667	99	61.679	Drosophila_melanogaster
ENSSSCG00000038900	-	96	97.445	ENSETEG00000017009	-	100	97.445	Echinops_telfairi
ENSSSCG00000038900	-	52	74.242	ENSEBUG00000002888	isy1	70	74.242	Eptatretus_burgeri
ENSSSCG00000038900	-	97	93.863	ENSEASG00005015810	-	97	93.863	Equus_asinus_asinus
ENSSSCG00000038900	-	94	98.507	ENSECAG00000013768	-	88	98.507	Equus_caballus
ENSSSCG00000038900	-	99	85.263	ENSELUG00000000489	isy1	99	85.263	Esox_lucius
ENSSSCG00000038900	-	100	98.246	ENSFCAG00000008664	-	100	98.246	Felis_catus
ENSSSCG00000038900	-	99	89.399	ENSFALG00000000023	-	99	89.399	Ficedula_albicollis
ENSSSCG00000038900	-	100	83.099	ENSFALG00000014998	-	100	83.099	Ficedula_albicollis
ENSSSCG00000038900	-	97	97.842	ENSFDAG00000012661	-	95	97.842	Fukomys_damarensis
ENSSSCG00000038900	-	99	76.408	ENSFHEG00000006776	isy1	99	78.521	Fundulus_heteroclitus
ENSSSCG00000038900	-	75	85.294	ENSGMOG00000005635	isy1	73	85.294	Gadus_morhua
ENSSSCG00000038900	-	99	90.106	ENSGALG00000005012	-	99	90.106	Gallus_gallus
ENSSSCG00000038900	-	98	75.445	ENSGAFG00000019550	isy1	99	75.887	Gambusia_affinis
ENSSSCG00000038900	-	99	78.092	ENSGACG00000003342	isy1	99	78.521	Gasterosteus_aculeatus
ENSSSCG00000038900	-	96	88.686	ENSGAGG00000021274	-	97	88.327	Gopherus_agassizii
ENSSSCG00000038900	-	100	97.895	ENSGGOG00000038733	ISY1	100	97.895	Gorilla_gorilla
ENSSSCG00000038900	-	98	79.004	ENSHGLG00000017889	-	79	79.359	Heterocephalus_glaber_female
ENSSSCG00000038900	-	100	98.592	ENSHGLG00000002576	-	100	98.592	Heterocephalus_glaber_female
ENSSSCG00000038900	-	99	96.491	ENSHGLG00100004254	-	99	96.491	Heterocephalus_glaber_male
ENSSSCG00000038900	-	98	79.004	ENSHGLG00100005531	-	79	79.359	Heterocephalus_glaber_male
ENSSSCG00000038900	-	99	72.695	ENSHCOG00000014775	isy1	99	72.695	Hippocampus_comes
ENSSSCG00000038900	-	99	84.452	ENSIPUG00000011379	Isy1	99	84.452	Ictalurus_punctatus
ENSSSCG00000038900	-	99	97.544	ENSSTOG00000024769	-	100	97.544	Ictidomys_tridecemlineatus
ENSSSCG00000038900	-	78	98.198	ENSJJAG00000009635	Isy1	96	98.198	Jaculus_jaculus
ENSSSCG00000038900	-	99	88.339	ENSLACG00000004490	isy1	99	87.986	Latimeria_chalumnae
ENSSSCG00000038900	-	99	85.211	ENSLOCG00000013988	isy1	99	85.211	Lepisosteus_oculatus
ENSSSCG00000038900	-	99	86.972	ENSLAFG00000004015	-	100	86.972	Loxodonta_africana
ENSSSCG00000038900	-	100	98.246	ENSMFAG00000037074	-	100	98.246	Macaca_fascicularis
ENSSSCG00000038900	-	100	98.246	ENSMMUG00000011580	ISY1-RAB43	100	98.246	Macaca_mulatta
ENSSSCG00000038900	-	99	90.141	ENSMNEG00000043206	ISY1	99	90.141	Macaca_nemestrina
ENSSSCG00000038900	-	100	98.246	ENSMLEG00000033836	-	100	98.246	Mandrillus_leucophaeus
ENSSSCG00000038900	-	99	79.859	ENSMAMG00000009501	isy1	99	79.859	Mastacembelus_armatus
ENSSSCG00000038900	-	99	78.169	ENSMZEG00005012021	isy1	99	79.577	Maylandia_zebra
ENSSSCG00000038900	-	99	89.399	ENSMGAG00000005181	-	99	89.753	Meleagris_gallopavo
ENSSSCG00000038900	-	100	98.246	ENSMAUG00000008793	Isy1	100	98.246	Mesocricetus_auratus
ENSSSCG00000038900	-	97	93.841	ENSMICG00000037547	-	100	93.841	Microcebus_murinus
ENSSSCG00000038900	-	100	98.246	ENSMOCG00000000472	Isy1	100	98.246	Microtus_ochrogaster
ENSSSCG00000038900	-	99	69.896	ENSMMOG00000017810	isy1	99	69.896	Mola_mola
ENSSSCG00000038900	-	100	91.549	ENSMODG00000008387	-	100	91.197	Monodelphis_domestica
ENSSSCG00000038900	-	99	79.577	ENSMALG00000020650	isy1	99	79.577	Monopterus_albus
ENSSSCG00000038900	-	100	98.246	MGP_CAROLIEiJ_G0028619	Isy1	100	98.246	Mus_caroli
ENSSSCG00000038900	-	100	98.246	ENSMUSG00000030056	Isy1	100	98.246	Mus_musculus
ENSSSCG00000038900	-	100	86.014	MGP_PahariEiJ_G0022357	Isy1	100	86.364	Mus_pahari
ENSSSCG00000038900	-	100	98.246	MGP_SPRETEiJ_G0029631	Isy1	100	98.246	Mus_spretus
ENSSSCG00000038900	-	99	87.676	ENSMPUG00000017307	-	95	87.676	Mustela_putorius_furo
ENSSSCG00000038900	-	99	91.901	ENSMLUG00000011804	-	100	91.901	Myotis_lucifugus
ENSSSCG00000038900	-	100	98.596	ENSNGAG00000015207	Isy1	100	98.596	Nannospalax_galili
ENSSSCG00000038900	-	63	85.556	ENSNBRG00000006974	isy1	75	85.556	Neolamprologus_brichardi
ENSSSCG00000038900	-	100	98.246	ENSNLEG00000028747	ISY1	100	98.246	Nomascus_leucogenys
ENSSSCG00000038900	-	82	87.692	ENSMEUG00000008434	-	78	87.692	Notamacropus_eugenii
ENSSSCG00000038900	-	99	97.527	ENSOPRG00000005468	-	85	97.527	Ochotona_princeps
ENSSSCG00000038900	-	97	84.892	ENSODEG00000002067	-	96	85.252	Octodon_degus
ENSSSCG00000038900	-	88	73.810	ENSONIG00000000267	isy1	100	75.000	Oreochromis_niloticus
ENSSSCG00000038900	-	99	81.071	ENSOANG00000013141	-	98	80.645	Ornithorhynchus_anatinus
ENSSSCG00000038900	-	100	98.246	ENSOCUG00000003923	-	100	98.246	Oryctolagus_cuniculus
ENSSSCG00000038900	-	99	78.521	ENSORLG00000013250	isy1	99	77.113	Oryzias_latipes
ENSSSCG00000038900	-	99	78.169	ENSORLG00020020966	isy1	99	76.761	Oryzias_latipes_hni
ENSSSCG00000038900	-	99	78.169	ENSORLG00015017316	isy1	99	76.761	Oryzias_latipes_hsok
ENSSSCG00000038900	-	99	77.544	ENSOMEG00000023905	isy1	99	76.140	Oryzias_melastigma
ENSSSCG00000038900	-	99	98.592	ENSOGAG00000005142	-	99	98.592	Otolemur_garnettii
ENSSSCG00000038900	-	99	91.873	ENSOARG00000003231	-	94	91.873	Ovis_aries
ENSSSCG00000038900	-	100	97.544	ENSPPAG00000042141	-	100	97.544	Pan_paniscus
ENSSSCG00000038900	-	100	98.246	ENSPPRG00000003480	-	100	98.246	Panthera_pardus
ENSSSCG00000038900	-	100	98.246	ENSPTIG00000017919	-	100	98.246	Panthera_tigris_altaica
ENSSSCG00000038900	-	100	90.228	ENSPTRG00000015367	ISY1	100	90.228	Pan_troglodytes
ENSSSCG00000038900	-	100	97.895	ENSPANG00000004750	-	100	97.895	Papio_anubis
ENSSSCG00000038900	-	99	85.512	ENSPKIG00000024592	isy1	99	85.512	Paramormyrops_kingsleyae
ENSSSCG00000038900	-	99	89.046	ENSPSIG00000009384	-	99	88.693	Pelodiscus_sinensis
ENSSSCG00000038900	-	96	65.693	ENSPMGG00000016328	isy1	88	64.964	Periophthalmus_magnuspinnatus
ENSSSCG00000038900	-	100	97.895	ENSPEMG00000005390	Isy1	100	97.895	Peromyscus_maniculatus_bairdii
ENSSSCG00000038900	-	63	85.475	ENSPMAG00000005010	-	99	85.475	Petromyzon_marinus
ENSSSCG00000038900	-	100	91.549	ENSPCIG00000000466	-	74	91.197	Phascolarctos_cinereus
ENSSSCG00000038900	-	63	66.854	ENSPFOG00000010228	isy1	99	68.715	Poecilia_formosa
ENSSSCG00000038900	-	98	67.626	ENSPREG00000015121	isy1	99	70.968	Poecilia_reticulata
ENSSSCG00000038900	-	100	98.246	ENSPPYG00000013424	-	100	98.246	Pongo_abelii
ENSSSCG00000038900	-	99	87.908	ENSPCAG00000009535	-	100	87.908	Procavia_capensis
ENSSSCG00000038900	-	73	100.000	ENSPCOG00000025242	-	100	100.000	Propithecus_coquereli
ENSSSCG00000038900	-	99	84.507	ENSPNAG00000000703	isy1	99	84.507	Pygocentrus_nattereri
ENSSSCG00000038900	-	100	98.592	ENSRNOG00000010021	Isy1	100	98.592	Rattus_norvegicus
ENSSSCG00000038900	-	100	83.509	ENSRBIG00000028747	ISY1	100	83.509	Rhinopithecus_bieti
ENSSSCG00000038900	-	100	98.246	ENSRROG00000032314	ISY1	100	98.246	Rhinopithecus_roxellana
ENSSSCG00000038900	-	100	97.895	ENSSBOG00000029301	-	100	97.895	Saimiri_boliviensis_boliviensis
ENSSSCG00000038900	-	100	91.549	ENSSHAG00000017192	-	100	91.197	Sarcophilus_harrisii
ENSSSCG00000038900	-	99	85.263	ENSSFOG00015001127	isy1	99	85.263	Scleropages_formosus
ENSSSCG00000038900	-	99	78.521	ENSSMAG00000006601	isy1	99	79.577	Scophthalmus_maximus
ENSSSCG00000038900	-	99	78.521	ENSSDUG00000018291	isy1	99	79.577	Seriola_dumerili
ENSSSCG00000038900	-	99	78.169	ENSSLDG00000022252	isy1	99	79.225	Seriola_lalandi_dorsalis
ENSSSCG00000038900	-	64	74.317	ENSSARG00000007648	-	67	74.317	Sorex_araneus
ENSSSCG00000038900	-	99	90.813	ENSSPUG00000018050	-	99	90.459	Sphenodon_punctatus
ENSSSCG00000038900	-	63	85.556	ENSSPAG00000021900	isy1	63	89.474	Stegastes_partitus
ENSSSCG00000038900	-	83	86.809	ENSTGUG00000007076	-	100	86.809	Taeniopygia_guttata
ENSSSCG00000038900	-	77	85.455	ENSTGUG00000003998	-	99	85.455	Taeniopygia_guttata
ENSSSCG00000038900	-	63	87.778	ENSTRUG00000002546	isy1	96	87.778	Takifugu_rubripes
ENSSSCG00000038900	-	99	73.611	ENSTNIG00000005224	isy1	99	73.611	Tetraodon_nigroviridis
ENSSSCG00000038900	-	77	77.727	ENSTBEG00000006938	-	100	77.727	Tupaia_belangeri
ENSSSCG00000038900	-	99	93.286	ENSTTRG00000015267	-	100	93.286	Tursiops_truncatus
ENSSSCG00000038900	-	100	98.246	ENSVVUG00000018261	-	100	98.246	Vulpes_vulpes
ENSSSCG00000038900	-	99	77.032	ENSXMAG00000012452	isy1	99	78.169	Xiphophorus_maculatus