EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000039308 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 3304 bases
Position: chr10:42741821-42745124
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000051475	EST1_DNA_bind	PF10373.9	2.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000066353	-	2646	-	ENSSSCP00000051475	881 (aa)	-	A0A287B5W5

Gene Model

Click here to download ENSSSCG00000039308's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000039308's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000039308	-	100	76.453	ENSSSCG00000006490	-	100	76.947

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000039308	-	100	75.369	ENSG00000198952	SMG5	99	75.271	Homo_sapiens
ENSSSCG00000039308	-	99	53.447	ENSAPOG00000019690	smg5	99	53.200	Acanthochromis_polyacanthus
ENSSSCG00000039308	-	97	71.875	ENSAMEG00000014458	SMG5	97	72.671	Ailuropoda_melanoleuca
ENSSSCG00000039308	-	99	51.062	ENSACIG00000001353	smg5	99	51.888	Amphilophus_citrinellus
ENSSSCG00000039308	-	96	51.979	ENSAOCG00000019483	smg5	91	60.260	Amphiprion_ocellaris
ENSSSCG00000039308	-	96	53.008	ENSAPEG00000022949	smg5	91	60.000	Amphiprion_percula
ENSSSCG00000039308	-	99	51.650	ENSATEG00000005348	smg5	99	51.949	Anabas_testudineus
ENSSSCG00000039308	-	96	62.525	ENSAPLG00000010263	SMG5	97	61.623	Anas_platyrhynchos
ENSSSCG00000039308	-	100	75.271	ENSANAG00000032899	SMG5	99	75.074	Aotus_nancymaae
ENSSSCG00000039308	-	99	51.731	ENSACLG00000009311	smg5	99	52.362	Astatotilapia_calliptera
ENSSSCG00000039308	-	91	56.501	ENSAMXG00000024616	smg5	99	49.041	Astyanax_mexicanus
ENSSSCG00000039308	-	99	37.313	ENSBTAG00000021747	-	98	36.527	Bos_taurus
ENSSSCG00000039308	-	100	74.778	ENSBTAG00000009435	SMG5	99	74.778	Bos_taurus
ENSSSCG00000039308	-	100	75.665	ENSCJAG00000005684	SMG5	99	75.468	Callithrix_jacchus
ENSSSCG00000039308	-	100	73.465	ENSCAFG00000016839	SMG5	99	73.267	Canis_familiaris
ENSSSCG00000039308	-	100	73.465	ENSCAFG00020006061	SMG5	99	73.267	Canis_lupus_dingo
ENSSSCG00000039308	-	100	75.074	ENSCHIG00000007709	SMG5	99	73.990	Capra_hircus
ENSSSCG00000039308	-	95	36.820	ENSCHIG00000006323	-	95	36.259	Capra_hircus
ENSSSCG00000039308	-	100	73.524	ENSTSYG00000004099	SMG5	99	73.327	Carlito_syrichta
ENSSSCG00000039308	-	95	62.819	ENSCAPG00000003631	SMG5	100	62.404	Cavia_aperea
ENSSSCG00000039308	-	100	73.943	ENSCPOG00000015696	SMG5	99	73.943	Cavia_porcellus
ENSSSCG00000039308	-	100	75.468	ENSCCAG00000027409	SMG5	99	75.271	Cebus_capucinus
ENSSSCG00000039308	-	100	75.369	ENSCATG00000030539	SMG5	99	75.172	Cercocebus_atys
ENSSSCG00000039308	-	100	74.730	ENSCLAG00000003983	SMG5	99	74.828	Chinchilla_lanigera
ENSSSCG00000039308	-	100	75.369	ENSCSAG00000002120	SMG5	99	75.172	Chlorocebus_sabaeus
ENSSSCG00000039308	-	52	70.438	ENSCHOG00000008741	-	54	71.168	Choloepus_hoffmanni
ENSSSCG00000039308	-	94	61.803	ENSCPBG00000025848	SMG5	100	60.751	Chrysemys_picta_bellii
ENSSSCG00000039308	-	100	71.527	ENSCANG00000029208	SMG5	99	71.626	Colobus_angolensis_palliatus
ENSSSCG00000039308	-	100	71.850	ENSCGRG00001006336	Smg5	99	71.752	Cricetulus_griseus_chok1gshd
ENSSSCG00000039308	-	97	71.573	ENSCGRG00000005111	Smg5	100	71.472	Cricetulus_griseus_crigri
ENSSSCG00000039308	-	99	50.541	ENSCSEG00000014220	smg5	99	50.739	Cynoglossus_semilaevis
ENSSSCG00000039308	-	99	48.889	ENSCVAG00000000529	smg5	99	49.849	Cyprinodon_variegatus
ENSSSCG00000039308	-	91	57.210	ENSDARG00000041481	smg5	99	49.182	Danio_rerio
ENSSSCG00000039308	-	92	30.855	ENSDNOG00000039862	-	99	31.473	Dasypus_novemcinctus
ENSSSCG00000039308	-	100	73.221	ENSDNOG00000000051	SMG5	99	71.906	Dasypus_novemcinctus
ENSSSCG00000039308	-	100	73.228	ENSDORG00000010382	Smg5	99	73.130	Dipodomys_ordii
ENSSSCG00000039308	-	76	84.906	ENSETEG00000010336	SMG5	82	85.000	Echinops_telfairi
ENSSSCG00000039308	-	88	39.471	ENSEBUG00000003739	smg5	95	39.607	Eptatretus_burgeri
ENSSSCG00000039308	-	100	74.975	ENSEASG00005019122	SMG5	99	74.975	Equus_asinus_asinus
ENSSSCG00000039308	-	100	74.975	ENSECAG00000001389	SMG5	99	74.975	Equus_caballus
ENSSSCG00000039308	-	73	77.285	ENSEEUG00000012690	SMG5	71	77.882	Erinaceus_europaeus
ENSSSCG00000039308	-	99	51.556	ENSELUG00000012585	smg5	99	51.265	Esox_lucius
ENSSSCG00000039308	-	100	73.689	ENSFCAG00000011783	SMG5	99	73.492	Felis_catus
ENSSSCG00000039308	-	55	64.148	ENSFALG00000001166	-	98	60.345	Ficedula_albicollis
ENSSSCG00000039308	-	97	72.407	ENSFDAG00000017388	SMG5	100	71.573	Fukomys_damarensis
ENSSSCG00000039308	-	95	49.894	ENSFHEG00000013939	smg5	98	50.640	Fundulus_heteroclitus
ENSSSCG00000039308	-	99	47.737	ENSGMOG00000007310	smg5	99	48.046	Gadus_morhua
ENSSSCG00000039308	-	99	61.331	ENSGALG00000029918	-	99	60.724	Gallus_gallus
ENSSSCG00000039308	-	92	54.338	ENSGAFG00000021691	smg5	94	56.471	Gambusia_affinis
ENSSSCG00000039308	-	99	48.108	ENSGACG00000013142	smg5	99	48.378	Gasterosteus_aculeatus
ENSSSCG00000039308	-	99	62.428	ENSGAGG00000016131	SMG5	99	61.759	Gopherus_agassizii
ENSSSCG00000039308	-	100	75.271	ENSGGOG00000010932	SMG5	99	75.074	Gorilla_gorilla
ENSSSCG00000039308	-	99	50.729	ENSHBUG00000008654	smg5	91	60.260	Haplochromis_burtoni
ENSSSCG00000039308	-	100	72.173	ENSHGLG00000019152	SMG5	99	72.271	Heterocephalus_glaber_female
ENSSSCG00000039308	-	90	71.632	ENSHGLG00100015948	SMG5	99	71.742	Heterocephalus_glaber_male
ENSSSCG00000039308	-	96	46.290	ENSHCOG00000010229	smg5	84	58.769	Hippocampus_comes
ENSSSCG00000039308	-	99	48.087	ENSIPUG00000006624	Smg5	99	48.226	Ictalurus_punctatus
ENSSSCG00000039308	-	100	75.271	ENSSTOG00000001780	SMG5	99	74.778	Ictidomys_tridecemlineatus
ENSSSCG00000039308	-	100	71.709	ENSJJAG00000022763	Smg5	99	71.611	Jaculus_jaculus
ENSSSCG00000039308	-	92	54.545	ENSKMAG00000014586	smg5	99	47.509	Kryptolebias_marmoratus
ENSSSCG00000039308	-	99	52.819	ENSLBEG00000002145	smg5	91	60.519	Labrus_bergylta
ENSSSCG00000039308	-	100	51.192	ENSLACG00000010521	SMG5	99	51.238	Latimeria_chalumnae
ENSSSCG00000039308	-	91	57.416	ENSLOCG00000008380	smg5	98	47.546	Lepisosteus_oculatus
ENSSSCG00000039308	-	99	73.960	ENSLAFG00000006241	SMG5	99	73.861	Loxodonta_africana
ENSSSCG00000039308	-	100	75.369	ENSMFAG00000045357	SMG5	99	75.172	Macaca_fascicularis
ENSSSCG00000039308	-	100	75.271	ENSMMUG00000000090	SMG5	99	75.149	Macaca_mulatta
ENSSSCG00000039308	-	100	75.271	ENSMNEG00000044425	SMG5	99	75.074	Macaca_nemestrina
ENSSSCG00000039308	-	100	69.804	ENSMLEG00000041192	SMG5	99	69.608	Mandrillus_leucophaeus
ENSSSCG00000039308	-	99	47.242	ENSMAMG00000010683	smg5	100	47.921	Mastacembelus_armatus
ENSSSCG00000039308	-	99	50.490	ENSMZEG00005015815	smg5	99	51.569	Maylandia_zebra
ENSSSCG00000039308	-	63	47.619	ENSMZEG00005016543	smg5	92	50.170	Maylandia_zebra
ENSSSCG00000039308	-	100	71.161	ENSMAUG00000010381	Smg5	99	71.063	Mesocricetus_auratus
ENSSSCG00000039308	-	100	75.271	ENSMICG00000002257	SMG5	99	75.074	Microcebus_murinus
ENSSSCG00000039308	-	100	70.825	ENSMOCG00000016590	Smg5	99	70.727	Microtus_ochrogaster
ENSSSCG00000039308	-	99	45.617	ENSMMOG00000017199	smg5	99	45.504	Mola_mola
ENSSSCG00000039308	-	75	32.678	ENSMODG00000004532	-	75	33.596	Monodelphis_domestica
ENSSSCG00000039308	-	88	70.880	ENSMODG00000016901	SMG5	98	70.429	Monodelphis_domestica
ENSSSCG00000039308	-	72	35.263	ENSMODG00000004735	-	79	35.294	Monodelphis_domestica
ENSSSCG00000039308	-	72	35.417	ENSMODG00000004511	-	71	35.171	Monodelphis_domestica
ENSSSCG00000039308	-	75	34.243	ENSMODG00000010675	-	78	35.013	Monodelphis_domestica
ENSSSCG00000039308	-	99	46.270	ENSMALG00000010375	smg5	99	46.037	Monopterus_albus
ENSSSCG00000039308	-	100	71.850	MGP_CAROLIEiJ_G0025163	Smg5	99	78.090	Mus_caroli
ENSSSCG00000039308	-	100	71.949	ENSMUSG00000001415	Smg5	99	78.090	Mus_musculus
ENSSSCG00000039308	-	100	71.415	MGP_PahariEiJ_G0026606	Smg5	99	78.090	Mus_pahari
ENSSSCG00000039308	-	100	71.850	MGP_SPRETEiJ_G0026104	Smg5	99	78.090	Mus_spretus
ENSSSCG00000039308	-	94	72.804	ENSMPUG00000004546	SMG5	100	72.593	Mustela_putorius_furo
ENSSSCG00000039308	-	100	75.025	ENSMLUG00000008518	SMG5	99	75.025	Myotis_lucifugus
ENSSSCG00000039308	-	95	36.698	ENSNGAG00000012101	-	95	36.881	Nannospalax_galili
ENSSSCG00000039308	-	100	72.638	ENSNGAG00000020706	Smg5	99	72.539	Nannospalax_galili
ENSSSCG00000039308	-	95	50.463	ENSNBRG00000004332	smg5	97	51.493	Neolamprologus_brichardi
ENSSSCG00000039308	-	100	74.975	ENSNLEG00000012439	SMG5	99	74.778	Nomascus_leucogenys
ENSSSCG00000039308	-	100	68.824	ENSMEUG00000012834	SMG5	99	67.941	Notamacropus_eugenii
ENSSSCG00000039308	-	100	73.103	ENSOPRG00000009152	SMG5	99	72.611	Ochotona_princeps
ENSSSCG00000039308	-	100	74.187	ENSODEG00000012237	SMG5	99	73.990	Octodon_degus
ENSSSCG00000039308	-	92	54.110	ENSONIG00000008632	smg5	99	47.467	Oreochromis_niloticus
ENSSSCG00000039308	-	89	33.811	ENSOCUG00000023338	-	99	32.816	Oryctolagus_cuniculus
ENSSSCG00000039308	-	97	74.369	ENSOCUG00000012886	SMG5	99	74.470	Oryctolagus_cuniculus
ENSSSCG00000039308	-	89	59.845	ENSORLG00000016239	smg5	99	48.061	Oryzias_latipes
ENSSSCG00000039308	-	99	50.642	ENSORLG00020013127	smg5	99	52.036	Oryzias_latipes_hni
ENSSSCG00000039308	-	99	50.689	ENSORLG00015019014	smg5	99	51.881	Oryzias_latipes_hsok
ENSSSCG00000039308	-	73	57.005	ENSOMEG00000021330	smg5	92	45.792	Oryzias_melastigma
ENSSSCG00000039308	-	100	73.793	ENSOGAG00000004966	SMG5	99	72.808	Otolemur_garnettii
ENSSSCG00000039308	-	100	75.172	ENSOARG00000005778	SMG5	99	74.089	Ovis_aries
ENSSSCG00000039308	-	95	37.422	ENSOARG00000011963	-	95	36.798	Ovis_aries
ENSSSCG00000039308	-	100	75.271	ENSPPAG00000011996	SMG5	99	75.074	Pan_paniscus
ENSSSCG00000039308	-	97	73.225	ENSPPRG00000011901	SMG5	97	74.167	Panthera_pardus
ENSSSCG00000039308	-	96	69.102	ENSPTIG00000007892	SMG5	94	70.833	Panthera_tigris_altaica
ENSSSCG00000039308	-	100	75.271	ENSPTRG00000023925	SMG5	99	75.074	Pan_troglodytes
ENSSSCG00000039308	-	100	75.271	ENSPTRG00000049282	-	99	75.074	Pan_troglodytes
ENSSSCG00000039308	-	100	75.369	ENSPANG00000011201	SMG5	99	75.172	Papio_anubis
ENSSSCG00000039308	-	99	51.765	ENSPKIG00000009402	smg5	99	51.917	Paramormyrops_kingsleyae
ENSSSCG00000039308	-	96	63.136	ENSPSIG00000015198	SMG5	97	62.322	Pelodiscus_sinensis
ENSSSCG00000039308	-	99	47.712	ENSPMGG00000010465	smg5	99	47.059	Periophthalmus_magnuspinnatus
ENSSSCG00000039308	-	100	72.047	ENSPEMG00000001819	Smg5	99	71.949	Peromyscus_maniculatus_bairdii
ENSSSCG00000039308	-	100	70.177	ENSPCIG00000018938	SMG5	99	68.996	Phascolarctos_cinereus
ENSSSCG00000039308	-	51	50.558	ENSPFOG00000010191	smg5	57	47.152	Poecilia_formosa
ENSSSCG00000039308	-	51	49.722	ENSPLAG00000009332	smg5	57	46.994	Poecilia_latipinna
ENSSSCG00000039308	-	99	51.158	ENSPMEG00000014105	smg5	99	51.934	Poecilia_mexicana
ENSSSCG00000039308	-	51	49.628	ENSPREG00000017713	smg5	59	47.161	Poecilia_reticulata
ENSSSCG00000039308	-	100	75.567	ENSPPYG00000000723	SMG5	99	75.369	Pongo_abelii
ENSSSCG00000039308	-	73	78.212	ENSPCAG00000008412	SMG5	87	68.936	Procavia_capensis
ENSSSCG00000039308	-	100	75.074	ENSPCOG00000004741	SMG5	99	74.877	Propithecus_coquereli
ENSSSCG00000039308	-	96	73.469	ENSPVAG00000016748	SMG5	95	73.469	Pteropus_vampyrus
ENSSSCG00000039308	-	99	46.784	ENSPNYG00000013397	smg5	91	60.260	Pundamilia_nyererei
ENSSSCG00000039308	-	99	48.499	ENSPNAG00000028363	smg5	99	48.493	Pygocentrus_nattereri
ENSSSCG00000039308	-	100	71.949	ENSRNOG00000019590	Smg5	99	71.850	Rattus_norvegicus
ENSSSCG00000039308	-	100	75.074	ENSRBIG00000027428	SMG5	99	74.877	Rhinopithecus_bieti
ENSSSCG00000039308	-	100	74.975	ENSRROG00000030035	SMG5	99	74.778	Rhinopithecus_roxellana
ENSSSCG00000039308	-	100	75.567	ENSSBOG00000033339	SMG5	99	75.369	Saimiri_boliviensis_boliviensis
ENSSSCG00000039308	-	97	69.609	ENSSHAG00000014163	SMG5	99	69.208	Sarcophilus_harrisii
ENSSSCG00000039308	-	85	37.067	ENSSHAG00000000561	-	78	37.067	Sarcophilus_harrisii
ENSSSCG00000039308	-	63	37.195	ENSSHAG00000000935	-	75	37.195	Sarcophilus_harrisii
ENSSSCG00000039308	-	99	51.768	ENSSFOG00015024175	smg5	99	51.775	Scleropages_formosus
ENSSSCG00000039308	-	99	47.111	ENSSMAG00000013059	smg5	99	47.904	Scophthalmus_maximus
ENSSSCG00000039308	-	99	47.132	ENSSDUG00000007122	smg5	91	59.640	Seriola_dumerili
ENSSSCG00000039308	-	99	47.476	ENSSLDG00000011418	smg5	91	60.260	Seriola_lalandi_dorsalis
ENSSSCG00000039308	-	90	63.210	ENSSARG00000012484	SMG5	99	62.745	Sorex_araneus
ENSSSCG00000039308	-	94	61.094	ENSSPUG00000002260	SMG5	100	60.689	Sphenodon_punctatus
ENSSSCG00000039308	-	96	52.875	ENSSPAG00000014266	smg5	91	60.052	Stegastes_partitus
ENSSSCG00000039308	-	99	62.611	ENSTGUG00000003748	-	99	62.549	Taeniopygia_guttata
ENSSSCG00000039308	-	99	47.059	ENSTRUG00000012580	smg5	99	51.074	Takifugu_rubripes
ENSSSCG00000039308	-	99	50.438	ENSTNIG00000010303	smg5	99	49.903	Tetraodon_nigroviridis
ENSSSCG00000039308	-	58	78.075	ENSTBEG00000002777	SMG5	55	78.771	Tupaia_belangeri
ENSSSCG00000039308	-	100	72.217	ENSTTRG00000001401	SMG5	99	71.429	Tursiops_truncatus
ENSSSCG00000039308	-	100	72.970	ENSUAMG00000013721	SMG5	99	72.772	Ursus_americanus
ENSSSCG00000039308	-	99	67.936	ENSUMAG00000018041	SMG5	99	67.435	Ursus_maritimus
ENSSSCG00000039308	-	90	70.556	ENSVPAG00000009446	SMG5	92	70.338	Vicugna_pacos
ENSSSCG00000039308	-	100	73.465	ENSVVUG00000005887	SMG5	99	73.267	Vulpes_vulpes
ENSSSCG00000039308	-	77	52.598	ENSXETG00000033791	SMG5	99	51.461	Xenopus_tropicalis
ENSSSCG00000039308	-	60	57.592	ENSXCOG00000004379	smg5	89	57.592	Xiphophorus_couchianus
ENSSSCG00000039308	-	99	51.412	ENSXMAG00000013499	smg5	95	56.000	Xiphophorus_maculatus