EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000039388 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 1609 bases
Position: chr17:19380948-19382556
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000033546	Ribosomal_S14	PF00253.21	9.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000054487	-	150	-	ENSSSCP00000033546	49 (aa)	-	A0A286ZPL8

Gene Model

Click here to download ENSSSCG00000039388's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000039388's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000039388	-	88	53.061	ENSSSCG00000001855	-	88	53.061
ENSSSCG00000039388	-	88	58.140	ENSSSCG00000037150	-	77	58.140
ENSSSCG00000039388	-	88	71.429	ENSSSCG00000038507	-	88	71.429
ENSSSCG00000039388	-	88	62.791	ENSSSCG00000035779	-	77	62.791

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000039388	-	84	73.171	ENSAMXG00000020569	-	57	87.879	Astyanax_mexicanus
ENSSSCG00000039388	-	88	71.429	ENSFCAG00000046197	-	88	71.429	Felis_catus
ENSSSCG00000039388	-	88	71.429	ENSPTIG00000012253	-	88	71.429	Panthera_tigris_altaica
ENSSSCG00000039388	-	86	71.429	ENSPKIG00000023490	-	71	71.429	Paramormyrops_kingsleyae
ENSSSCG00000039388	-	71	80.000	ENSPREG00000014241	-	54	80.000	Poecilia_reticulata
ENSSSCG00000039388	-	86	66.667	ENSPNYG00000002710	-	53	66.667	Pundamilia_nyererei
ENSSSCG00000039388	-	96	50.980	ENSSLDG00000011464	-	94	50.980	Seriola_lalandi_dorsalis