EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSSCG00000039460 (Gene tree)
Gene ID
110261057
Gene Symbol
-
Alias
-
Full Name
ribosomal protein L28
Gene Type
protein_coding
Species
Sus_scrofa
Status
putative
Strand
Plus strand
Length
5461 bases
Position
chr6:59556687-59562147
Accession
110261057
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSSCP00000040951Ribosomal_L28ePF01778.175.6e-3611
ENSSSCP00000044273Ribosomal_L28ePF01778.175.6e-3611
ENSSSCP00000049432Ribosomal_L28ePF01778.175.6e-3611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSSCT00000044316-3653XM_021095013ENSSSCP00000044273137 (aa)XP_020950672A0A287AJT7
ENSSSCT00000048452-520XM_021095014ENSSSCP00000040951137 (aa)XP_020950673A0A287AJT7
ENSSSCT00000039677-3306XM_021095009ENSSSCP00000049432137 (aa)XP_020950668A0A287AJT7
Gene Model
Click here to download ENSSSCG00000039460's gene model file
Pathways
Pathway IDPathway NameSource
ssc03010RibosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000039460's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSSCG00000039460-10063.121ENSSSCG00000040515-7963.121
ENSSSCG00000039460-9667.939ENSSSCG00000039543-8867.939
ENSSSCG00000039460-8768.595ENSSSCG00000030430-8768.595
ENSSSCG00000039460-6589.888ENSSSCG00000038865-6592.958
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSSCG00000039460-10097.810ENSG00000108107RPL2810097.810Homo_sapiens
ENSSSCG00000039460-10079.562ENSAPOG00000023913rpl2810079.562Acanthochromis_polyacanthus
ENSSSCG00000039460-10097.810ENSAMEG00000003764RPL2810097.810Ailuropoda_melanoleuca
ENSSSCG00000039460-10080.292ENSACIG00000014369rpl2810080.292Amphilophus_citrinellus
ENSSSCG00000039460-10078.832ENSAOCG00000019874rpl289478.832Amphiprion_ocellaris
ENSSSCG00000039460-10078.832ENSAPEG00000020972rpl2810078.832Amphiprion_percula
ENSSSCG00000039460-10079.562ENSATEG00000013839rpl2810079.562Anabas_testudineus
ENSSSCG00000039460-10062.774ENSACAG00000006100-10062.774Anolis_carolinensis
ENSSSCG00000039460-10086.131ENSACAG00000015980-10086.131Anolis_carolinensis
ENSSSCG00000039460-10098.540ENSANAG00000034536RPL2810098.540Aotus_nancymaae
ENSSSCG00000039460-10081.022ENSACLG00000027917rpl289881.022Astatotilapia_calliptera
ENSSSCG00000039460-10073.723ENSAMXG00000042541rpl2810073.723Astyanax_mexicanus
ENSSSCG00000039460-10097.080ENSBTAG00000023343RPL286697.080Bos_taurus
ENSSSCG00000039460-8838.211WBGene00004442rpl-289138.211Caenorhabditis_elegans
ENSSSCG00000039460-10098.540ENSCJAG00000000869RPL2810098.540Callithrix_jacchus
ENSSSCG00000039460-10097.080ENSCAFG00000002585RPL2810097.080Canis_familiaris
ENSSSCG00000039460-10096.350ENSCAFG00020024049-10096.350Canis_lupus_dingo
ENSSSCG00000039460-10097.080ENSCAFG00020015496-10097.080Canis_lupus_dingo
ENSSSCG00000039460-9371.654ENSCHIG00000010485-8971.654Capra_hircus
ENSSSCG00000039460-10096.350ENSCHIG00000025540-10096.350Capra_hircus
ENSSSCG00000039460-10067.883ENSTSYG00000035503-10067.883Carlito_syrichta
ENSSSCG00000039460-10069.343ENSTSYG00000036697-9069.343Carlito_syrichta
ENSSSCG00000039460-8486.087ENSTSYG00000032922-9886.087Carlito_syrichta
ENSSSCG00000039460-10098.540ENSTSYG00000033853RPL2810098.540Carlito_syrichta
ENSSSCG00000039460-10097.810ENSCAPG00000007161-10097.810Cavia_aperea
ENSSSCG00000039460-10099.270ENSCPOG00000012833-10099.270Cavia_porcellus
ENSSSCG00000039460-10097.080ENSCPOG00000023112-10097.080Cavia_porcellus
ENSSSCG00000039460-10075.182ENSCCAG00000012793-10075.182Cebus_capucinus
ENSSSCG00000039460-10098.540ENSCCAG00000025765RPL2810098.540Cebus_capucinus
ENSSSCG00000039460-10072.993ENSCCAG00000003452-10072.993Cebus_capucinus
ENSSSCG00000039460-10086.861ENSCCAG00000018730-10086.861Cebus_capucinus
ENSSSCG00000039460-10097.810ENSCATG00000031417RPL2810097.810Cercocebus_atys
ENSSSCG00000039460-9973.529ENSCATG00000039353-9973.529Cercocebus_atys
ENSSSCG00000039460-10099.270ENSCLAG00000000684RPL2810099.270Chinchilla_lanigera
ENSSSCG00000039460-10094.161ENSCSAG00000018419-10094.161Chlorocebus_sabaeus
ENSSSCG00000039460-10097.080ENSCSAG00000001738-10097.080Chlorocebus_sabaeus
ENSSSCG00000039460-8084.545ENSCPBG00000008298RPL286784.545Chrysemys_picta_bellii
ENSSSCG00000039460-8963.115ENSCSAVG00000008832-9863.115Ciona_savignyi
ENSSSCG00000039460-9971.324ENSCANG00000008828-9971.324Colobus_angolensis_palliatus
ENSSSCG00000039460-10096.350ENSCANG00000002437-10096.350Colobus_angolensis_palliatus
ENSSSCG00000039460-10096.350ENSCANG00000038322RPL2810096.350Colobus_angolensis_palliatus
ENSSSCG00000039460-10094.891ENSCANG00000021622-10094.891Colobus_angolensis_palliatus
ENSSSCG00000039460-10081.022ENSCGRG00001019521-10081.022Cricetulus_griseus_chok1gshd
ENSSSCG00000039460-10097.810ENSCGRG00001023644Rpl2810097.810Cricetulus_griseus_chok1gshd
ENSSSCG00000039460-8097.273ENSCGRG00000004471Rpl2810097.273Cricetulus_griseus_crigri
ENSSSCG00000039460-8378.070ENSCGRG00000006958-8678.070Cricetulus_griseus_crigri
ENSSSCG00000039460-10079.562ENSCSEG00000001312rpl2810079.562Cynoglossus_semilaevis
ENSSSCG00000039460-10080.292ENSCVAG00000022473rpl2810080.292Cyprinodon_variegatus
ENSSSCG00000039460-9977.941ENSDARG00000005791rpl289977.941Danio_rerio
ENSSSCG00000039460-7976.259ENSDNOG00000046131RPL288676.259Dasypus_novemcinctus
ENSSSCG00000039460-10096.350ENSDNOG00000044172-10096.350Dasypus_novemcinctus
ENSSSCG00000039460-10097.080ENSDORG00000012809Rpl2810097.080Dipodomys_ordii
ENSSSCG00000039460-9446.565FBgn0035422RpL289146.565Drosophila_melanogaster
ENSSSCG00000039460-8066.972ENSEBUG00000009129rpl288466.972Eptatretus_burgeri
ENSSSCG00000039460-10097.810ENSEASG00005020779RPL2810097.810Equus_asinus_asinus
ENSSSCG00000039460-10097.810ENSECAG00000026938-6897.810Equus_caballus
ENSSSCG00000039460-10076.642ENSELUG00000001730rpl2810076.642Esox_lucius
ENSSSCG00000039460-9369.531ENSFCAG00000040593-7469.531Felis_catus
ENSSSCG00000039460-10097.080ENSFCAG00000005639-10097.080Felis_catus
ENSSSCG00000039460-10099.270ENSFDAG00000021448RPL2810099.270Fukomys_damarensis
ENSSSCG00000039460-10081.752ENSFHEG00000007732rpl288181.752Fundulus_heteroclitus
ENSSSCG00000039460-10074.453ENSGMOG00000015325rpl2810074.453Gadus_morhua
ENSSSCG00000039460-10080.292ENSGAFG00000012973rpl2810080.292Gambusia_affinis
ENSSSCG00000039460-10078.102ENSGACG00000016089rpl2810078.102Gasterosteus_aculeatus
ENSSSCG00000039460-10087.591ENSGAGG00000016908RPL2810087.591Gopherus_agassizii
ENSSSCG00000039460-10097.080ENSGGOG00000022653-10097.080Gorilla_gorilla
ENSSSCG00000039460-10078.832ENSGGOG00000027685-7378.832Gorilla_gorilla
ENSSSCG00000039460-10081.022ENSHBUG00000007390rpl289881.022Haplochromis_burtoni
ENSSSCG00000039460-10098.540ENSHGLG00000009865RPL2810098.540Heterocephalus_glaber_female
ENSSSCG00000039460-10098.540ENSHGLG00100005407RPL2810098.540Heterocephalus_glaber_male
ENSSSCG00000039460-10080.292ENSHCOG00000003134rpl2810080.292Hippocampus_comes
ENSSSCG00000039460-10076.642ENSIPUG00000004935rpl2810076.642Ictalurus_punctatus
ENSSSCG00000039460-10097.810ENSSTOG00000008006RPL2810097.810Ictidomys_tridecemlineatus
ENSSSCG00000039460-10097.810ENSJJAG00000019841Rpl2810097.810Jaculus_jaculus
ENSSSCG00000039460-10080.292ENSKMAG00000011412rpl2810080.292Kryptolebias_marmoratus
ENSSSCG00000039460-10078.832ENSLBEG00000027857rpl2810078.832Labrus_bergylta
ENSSSCG00000039460-8164.865ENSLACG00000011783RPL2810066.071Latimeria_chalumnae
ENSSSCG00000039460-10081.022ENSLOCG00000003073rpl289381.022Lepisosteus_oculatus
ENSSSCG00000039460-10097.810ENSLAFG00000022257RPL2810097.810Loxodonta_africana
ENSSSCG00000039460-10097.810ENSMFAG00000043131RPL2810097.810Macaca_fascicularis
ENSSSCG00000039460-10097.810ENSMMUG00000015901RPL2810097.810Macaca_mulatta
ENSSSCG00000039460-10097.810ENSMNEG00000032714RPL2810097.810Macaca_nemestrina
ENSSSCG00000039460-10097.810ENSMLEG00000039619RPL2810097.810Mandrillus_leucophaeus
ENSSSCG00000039460-10081.022ENSMAMG00000017519rpl2810081.022Mastacembelus_armatus
ENSSSCG00000039460-10081.022ENSMZEG00005002151rpl289881.022Maylandia_zebra
ENSSSCG00000039460-10076.642ENSMAUG00000017070-10076.642Mesocricetus_auratus
ENSSSCG00000039460-10082.482ENSMAUG00000004738-10082.482Mesocricetus_auratus
ENSSSCG00000039460-10097.810ENSMAUG00000021147-10097.810Mesocricetus_auratus
ENSSSCG00000039460-9769.173ENSMAUG00000016592-8069.173Mesocricetus_auratus
ENSSSCG00000039460-10097.810ENSMAUG00000000783-10097.810Mesocricetus_auratus
ENSSSCG00000039460-10097.810ENSMICG00000000996RPL2810097.810Microcebus_murinus
ENSSSCG00000039460-10079.562ENSMICG00000033709-10079.562Microcebus_murinus
ENSSSCG00000039460-10097.810ENSMOCG00000006245-10097.810Microtus_ochrogaster
ENSSSCG00000039460-10094.928ENSMOCG00000006881-10094.928Microtus_ochrogaster
ENSSSCG00000039460-10094.891ENSMOCG00000008075-10094.891Microtus_ochrogaster
ENSSSCG00000039460-10075.912ENSMMOG00000004489rpl2810075.912Mola_mola
ENSSSCG00000039460-9989.706ENSMODG00000000275RPL289989.706Monodelphis_domestica
ENSSSCG00000039460-10078.102ENSMALG00000004571rpl2810078.102Monopterus_albus
ENSSSCG00000039460-10097.810MGP_CAROLIEiJ_G0029130Rpl2810097.810Mus_caroli
ENSSSCG00000039460-10097.810ENSMUSG00000030432Rpl2810097.810Mus_musculus
ENSSSCG00000039460-10097.080MGP_PahariEiJ_G0020999Rpl2810097.080Mus_pahari
ENSSSCG00000039460-10097.810MGP_SPRETEiJ_G0030183Rpl2810097.810Mus_spretus
ENSSSCG00000039460-10097.080ENSMPUG00000007450RPL2810097.080Mustela_putorius_furo
ENSSSCG00000039460-10095.620ENSMLUG00000023789-10095.620Myotis_lucifugus
ENSSSCG00000039460-10094.161ENSMLUG00000023198-10094.161Myotis_lucifugus
ENSSSCG00000039460-10097.810ENSNGAG00000016459Rpl288497.810Nannospalax_galili
ENSSSCG00000039460-9469.767ENSNGAG00000001032-10069.767Nannospalax_galili
ENSSSCG00000039460-10081.022ENSNBRG00000006729rpl288481.022Neolamprologus_brichardi
ENSSSCG00000039460-10097.810ENSNLEG00000010503-10097.810Nomascus_leucogenys
ENSSSCG00000039460-10071.533ENSNLEG00000029689-10071.533Nomascus_leucogenys
ENSSSCG00000039460-10097.810ENSOPRG00000000463-10097.810Ochotona_princeps
ENSSSCG00000039460-5098.529ENSOPRG00000013428-10098.529Ochotona_princeps
ENSSSCG00000039460-10095.620ENSODEG00000019117-10095.620Octodon_degus
ENSSSCG00000039460-10096.350ENSODEG00000020377-10096.350Octodon_degus
ENSSSCG00000039460-10099.270ENSODEG00000010391-10099.270Octodon_degus
ENSSSCG00000039460-10098.540ENSODEG00000019864-10098.540Octodon_degus
ENSSSCG00000039460-10081.022ENSONIG00000007486rpl2810081.022Oreochromis_niloticus
ENSSSCG00000039460-10089.855ENSOCUG00000027875-10089.855Oryctolagus_cuniculus
ENSSSCG00000039460-10097.810ENSOCUG00000027112-10097.810Oryctolagus_cuniculus
ENSSSCG00000039460-10080.292ENSORLG00000005108rpl2810080.292Oryzias_latipes
ENSSSCG00000039460-10080.292ENSORLG00020007182rpl2810080.292Oryzias_latipes_hni
ENSSSCG00000039460-10080.292ENSORLG00015013944rpl2810080.292Oryzias_latipes_hsok
ENSSSCG00000039460-10080.292ENSOMEG00000009716rpl2810080.292Oryzias_melastigma
ENSSSCG00000039460-10097.810ENSOGAG00000025533RPL2810097.810Otolemur_garnettii
ENSSSCG00000039460-10097.080ENSOARG00000001428RPL2810097.080Ovis_aries
ENSSSCG00000039460-10097.810ENSPPAG00000038000-10097.810Pan_paniscus
ENSSSCG00000039460-10072.263ENSPPAG00000032901-10072.263Pan_paniscus
ENSSSCG00000039460-10078.102ENSPPAG00000034138-10078.102Pan_paniscus
ENSSSCG00000039460-10097.080ENSPPRG00000012962-10097.080Panthera_pardus
ENSSSCG00000039460-9966.667ENSPPRG00000013998-8566.667Panthera_pardus
ENSSSCG00000039460-10067.883ENSPPRG00000012498-10067.883Panthera_pardus
ENSSSCG00000039460-10097.080ENSPTIG00000011191-10097.080Panthera_tigris_altaica
ENSSSCG00000039460-10078.102ENSPTRG00000043492-10078.102Pan_troglodytes
ENSSSCG00000039460-10097.810ENSPTRG00000011505RPL2810097.810Pan_troglodytes
ENSSSCG00000039460-10075.912ENSPTRG00000043676-10075.912Pan_troglodytes
ENSSSCG00000039460-10097.810ENSPANG00000029716RPL2810097.810Papio_anubis
ENSSSCG00000039460-9980.882ENSPKIG00000014698rpl289980.882Paramormyrops_kingsleyae
ENSSSCG00000039460-8081.651ENSPSIG00000015206RPL288481.651Pelodiscus_sinensis
ENSSSCG00000039460-10077.372ENSPMGG00000004586rpl2810077.372Periophthalmus_magnuspinnatus
ENSSSCG00000039460-10089.051ENSPEMG00000013352-10089.051Peromyscus_maniculatus_bairdii
ENSSSCG00000039460-10097.810ENSPEMG00000011755Rpl2810097.810Peromyscus_maniculatus_bairdii
ENSSSCG00000039460-10077.857ENSPMAG00000008617rpl2810077.857Petromyzon_marinus
ENSSSCG00000039460-9279.365ENSPCIG00000018601-9579.365Phascolarctos_cinereus
ENSSSCG00000039460-5075.362ENSPCIG00000019415-7075.362Phascolarctos_cinereus
ENSSSCG00000039460-10081.022ENSPFOG00000002206rpl2810081.022Poecilia_formosa
ENSSSCG00000039460-10081.022ENSPLAG00000003206rpl2810081.022Poecilia_latipinna
ENSSSCG00000039460-10081.022ENSPMEG00000000595rpl2810081.022Poecilia_mexicana
ENSSSCG00000039460-10081.022ENSPREG00000002015rpl2810081.022Poecilia_reticulata
ENSSSCG00000039460-7482.353ENSPPYG00000029517-7682.353Pongo_abelii
ENSSSCG00000039460-10097.080ENSPPYG00000010417-10097.080Pongo_abelii
ENSSSCG00000039460-5098.529ENSPCAG00000012768-10098.529Procavia_capensis
ENSSSCG00000039460-10094.891ENSPCOG00000007456-10094.891Propithecus_coquereli
ENSSSCG00000039460-10097.810ENSPCOG00000017000RPL2810097.810Propithecus_coquereli
ENSSSCG00000039460-10087.591ENSPCOG00000025957-10087.591Propithecus_coquereli
ENSSSCG00000039460-9290.476ENSPCOG00000014236-8995.763Propithecus_coquereli
ENSSSCG00000039460-10095.620ENSPVAG00000007315RPL2810095.620Pteropus_vampyrus
ENSSSCG00000039460-10080.292ENSPNYG00000004757rpl2810080.292Pundamilia_nyererei
ENSSSCG00000039460-10075.912ENSPNAG00000003547rpl289275.912Pygocentrus_nattereri
ENSSSCG00000039460-10091.971ENSRNOG00000061441AABR07071935.110091.971Rattus_norvegicus
ENSSSCG00000039460-10097.810ENSRNOG00000017127Rpl2810097.810Rattus_norvegicus
ENSSSCG00000039460-9687.770ENSRNOG00000009240AABR07016623.19787.770Rattus_norvegicus
ENSSSCG00000039460-10096.350ENSRNOG00000037673AABR07071891.210096.350Rattus_norvegicus
ENSSSCG00000039460-10097.810ENSRBIG00000034637RPL2810097.810Rhinopithecus_bieti
ENSSSCG00000039460-10096.350ENSRBIG00000003677-10096.350Rhinopithecus_bieti
ENSSSCG00000039460-10067.153ENSRROG00000030502-10067.153Rhinopithecus_roxellana
ENSSSCG00000039460-10097.810ENSRROG00000028904RPL2810097.810Rhinopithecus_roxellana
ENSSSCG00000039460-10067.883ENSSBOG00000034324-10067.883Saimiri_boliviensis_boliviensis
ENSSSCG00000039460-10098.540ENSSBOG00000028286RPL2810098.540Saimiri_boliviensis_boliviensis
ENSSSCG00000039460-5977.778ENSSBOG00000022635-8777.778Saimiri_boliviensis_boliviensis
ENSSSCG00000039460-10081.022ENSSFOG00015001292rpl2810081.022Scleropages_formosus
ENSSSCG00000039460-10081.022ENSSFOG00015012801-10081.022Scleropages_formosus
ENSSSCG00000039460-10079.562ENSSMAG00000008756rpl2810079.562Scophthalmus_maximus
ENSSSCG00000039460-10079.562ENSSDUG00000015127rpl2810079.562Seriola_dumerili
ENSSSCG00000039460-7139.394ENSSLDG00000009395-7939.394Seriola_lalandi_dorsalis
ENSSSCG00000039460-10078.832ENSSLDG00000000414rpl2810078.832Seriola_lalandi_dorsalis
ENSSSCG00000039460-5774.390ENSSLDG00000006440-8674.390Seriola_lalandi_dorsalis
ENSSSCG00000039460-10083.212ENSSARG00000009741RPL2810083.212Sorex_araneus
ENSSSCG00000039460-9984.559ENSSPUG00000010390RPL289984.559Sphenodon_punctatus
ENSSSCG00000039460-10080.292ENSSPAG00000015122rpl287280.292Stegastes_partitus
ENSSSCG00000039460-10080.292ENSTRUG00000025383rpl2810080.292Takifugu_rubripes
ENSSSCG00000039460-10080.292ENSTNIG00000002577rpl2810080.292Tetraodon_nigroviridis
ENSSSCG00000039460-10098.540ENSTTRG00000002428RPL2810098.540Tursiops_truncatus
ENSSSCG00000039460-8874.167ENSUAMG00000003339-9474.167Ursus_americanus
ENSSSCG00000039460-10097.810ENSUAMG00000017635RPL2810097.810Ursus_americanus
ENSSSCG00000039460-9861.940ENSUAMG00000023977-8161.940Ursus_americanus
ENSSSCG00000039460-9569.231ENSUAMG00000002452-9769.231Ursus_americanus
ENSSSCG00000039460-8096.364ENSUMAG00000024630-8796.364Ursus_maritimus
ENSSSCG00000039460-8874.167ENSUMAG00000006441-7574.167Ursus_maritimus
ENSSSCG00000039460-5098.529ENSVPAG00000004586-10098.529Vicugna_pacos
ENSSSCG00000039460-10080.292ENSXETG00000000132rpl289980.292Xenopus_tropicalis
ENSSSCG00000039460-10078.102ENSXCOG00000001554rpl2810078.102Xiphophorus_couchianus
ENSSSCG00000039460-10078.832ENSXMAG00000005190rpl2810078.832Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us